RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 CNBD1Q8NA66 436 aa38.45■■■■□ 3.75
RAB40C-211ENST00000568586 ANKRD31Q8N7Z5 1873 aa38.44■■■■□ 3.74
RAB40C-211ENST00000568586 HLFQ16534 295 aa38.44■■■■□ 3.74
RAB40C-211ENST00000568586 LRP10Q7Z4F1 713 aa38.44■■■■□ 3.74
RAB40C-211ENST00000568586 ATP10DQ9P241 1426 aa38.44■■■■□ 3.74
RAB40C-211ENST00000568586 PDIA6Q15084 440 aa38.43■■■■□ 3.74
RAB40C-211ENST00000568586 CFAP44Q96MT7 982 aa38.42■■■■□ 3.74
RAB40C-211ENST00000568586 MAP3K15Q6ZN16 1313 aa38.41■■■■□ 3.74
RAB40C-211ENST00000568586 TTLL6Q8N841 843 aa38.41■■■■□ 3.74
RAB40C-211ENST00000568586 NIP7Q9Y221 180 aaKnown RBP eCLIP38.41■■■■□ 3.74
RAB40C-211ENST00000568586 MYL6BP14649 208 aa38.4■■■■□ 3.74
RAB40C-211ENST00000568586 TTLL7Q6ZT98 887 aa38.4■■■■□ 3.74
RAB40C-211ENST00000568586 ST5P78524 1137 aa38.39■■■■□ 3.74
RAB40C-211ENST00000568586 NBPF5PQ86XG9 351 aaPredicted RBP38.39■■■■□ 3.74
RAB40C-211ENST00000568586 ANP32CO43423 234 aa38.38■■■■□ 3.73
RAB40C-211ENST00000568586 ZNF853P0CG23 659 aa38.38■■■■□ 3.73
RAB40C-211ENST00000568586 CCDC24Q8N4L8 307 aa38.38■■■■□ 3.73
RAB40C-211ENST00000568586 NGEFQ8N5V2 710 aa38.38■■■■□ 3.73
RAB40C-211ENST00000568586 TPTE2Q6XPS3 522 aa38.37■■■■□ 3.73
RAB40C-211ENST00000568586 KIF6Q6ZMV9 814 aa38.37■■■■□ 3.73
RAB40C-211ENST00000568586 HOXB7P09629 217 aa38.36■■■■□ 3.73
RAB40C-211ENST00000568586 EIF2S2P20042 333 aaKnown RBP38.36■■■■□ 3.73
RAB40C-211ENST00000568586 KLRG2A4D1S0 409 aaPredicted RBP38.35■■■■□ 3.73
RAB40C-211ENST00000568586 LAS1LQ9Y4W2 734 aaKnown RBP38.35■■■■□ 3.73
RAB40C-211ENST00000568586 KRT24Q2M2I5 525 aa38.34■■■■□ 3.73
RAB40C-211ENST00000568586 CALD1Q05682 793 aaKnown RBP38.33■■■■□ 3.73
RAB40C-211ENST00000568586 NPHP1O15259 732 aa38.32■■■■□ 3.72
RAB40C-211ENST00000568586 SRGNP10124 158 aa38.32■■■■□ 3.72
RAB40C-211ENST00000568586 PROSER3Q2NL68 480 aa38.32■■■■□ 3.72
RAB40C-211ENST00000568586 IFT57Q9NWB7 429 aa38.32■■■■□ 3.72
RAB40C-211ENST00000568586 NUP98P52948 1817 aa38.31■■■■□ 3.72
RAB40C-211ENST00000568586 STYK1Q6J9G0 422 aa38.31■■■■□ 3.72
RAB40C-211ENST00000568586 MBIPQ9NS73 344 aa38.31■■■■□ 3.72
RAB40C-211ENST00000568586 COL11A2P13942 1736 aaPredicted RBP38.31■■■■□ 3.72
RAB40C-211ENST00000568586 GIGYF2Q6Y7W6 1299 aaKnown RBP38.3■■■■□ 3.72
RAB40C-211ENST00000568586 ZNF34Q8IZ26 560 aa38.29■■■■□ 3.72
RAB40C-211ENST00000568586 ZBTB3Q9H5J0 574 aa38.29■■■■□ 3.72
RAB40C-211ENST00000568586 DDX21Q9NR30 783 aaKnown RBP eCLIP38.29■■■■□ 3.72
RAB40C-211ENST00000568586 GNAI1P63096 354 aa38.28■■■■□ 3.72
RAB40C-211ENST00000568586 ZNF622Q969S3 477 aaKnown RBP eCLIP38.28■■■■□ 3.72
RAB40C-211ENST00000568586 MRS2Q9HD23 443 aa38.28■■■■□ 3.72
RAB40C-211ENST00000568586 IBTKQ9P2D0 1353 aaPredicted RBP38.28■■■■□ 3.72
RAB40C-211ENST00000568586 NCBP3Q53F19 620 aaKnown RBP38.27■■■■□ 3.72
RAB40C-211ENST00000568586 C9orf131Q5VYM1 1079 aa38.27■■■■□ 3.72
RAB40C-211ENST00000568586 MASTLQ96GX5 879 aa38.27■■■■□ 3.72
RAB40C-211ENST00000568586 GPBP1L1Q9HC44 474 aaPredicted RBP38.27■■■■□ 3.72
RAB40C-211ENST00000568586 ANXA1P04083 346 aa38.26■■■■□ 3.72
RAB40C-211ENST00000568586 CCDC27Q2M243 656 aa38.26■■■■□ 3.72
RAB40C-211ENST00000568586 CNKSR1Q969H4 720 aa38.26■■■■□ 3.72
RAB40C-211ENST00000568586 NYXQ9GZU5 481 aa38.26■■■■□ 3.72
RAB40C-211ENST00000568586 UBN2Q6ZU65 1347 aa38.24■■■■□ 3.71
RAB40C-211ENST00000568586 C1QTNF8P60827 252 aa38.23■■■■□ 3.71
RAB40C-211ENST00000568586 DUSP27Q5VZP5 1158 aa38.23■■■■□ 3.71
RAB40C-211ENST00000568586 COPS6Q7L5N1 327 aa38.23■■■■□ 3.71
RAB40C-211ENST00000568586 NECTIN2Q92692 538 aa38.23■■■■□ 3.71
RAB40C-211ENST00000568586 HDGFL1Q5TGJ6 251 aa38.22■■■■□ 3.71
RAB40C-211ENST00000568586 SBF1O95248 1867 aa38.22■■■■□ 3.71
RAB40C-211ENST00000568586 FAM177BA6PVY3 158 aa38.21■■■■□ 3.71
RAB40C-211ENST00000568586 NPR1P16066 1061 aa38.21■■■■□ 3.71
RAB40C-211ENST00000568586 XAGE3Q8WTP9 111 aa38.21■■■■□ 3.71
RAB40C-211ENST00000568586 RIC1Q4ADV7 1423 aa38.21■■■■□ 3.71
RAB40C-211ENST00000568586 CHPF2Q9P2E5 772 aa38.2■■■■□ 3.71
RAB40C-211ENST00000568586 NFKBIEO00221 500 aa38.19■■■■□ 3.7
RAB40C-211ENST00000568586 GPTP24298 496 aa38.19■■■■□ 3.7
RAB40C-211ENST00000568586 PARP10Q53GL7 1025 aa38.19■■■■□ 3.7
RAB40C-211ENST00000568586 SUSD4Q5VX71 490 aa38.19■■■■□ 3.7
RAB40C-211ENST00000568586 RNF181Q9P0P0 153 aa38.19■■■■□ 3.7
RAB40C-211ENST00000568586 DBF4Q9UBU7 674 aaPredicted RBP38.19■■■■□ 3.7
RAB40C-211ENST00000568586 GTF2E1P29083 439 aaPredicted RBP38.18■■■■□ 3.7
RAB40C-211ENST00000568586 CRY2Q49AN0 593 aa38.18■■■■□ 3.7
RAB40C-211ENST00000568586 PRPF40BQ6NWY9 871 aaKnown RBP38.18■■■■□ 3.7
RAB40C-211ENST00000568586 ZNF526Q8TF50 670 aaPredicted RBP38.18■■■■□ 3.7
RAB40C-211ENST00000568586 C21orf2O43822 256 aa38.17■■■■□ 3.7
RAB40C-211ENST00000568586 LMNB1P20700 586 aa38.17■■■■□ 3.7
RAB40C-211ENST00000568586 PRELPP51888 382 aa38.17■■■■□ 3.7
RAB40C-211ENST00000568586 RASSF7Q02833 373 aa38.17■■■■□ 3.7
RAB40C-211ENST00000568586 C7orf43Q8WVR3 580 aa38.17■■■■□ 3.7
RAB40C-211ENST00000568586 ABCC12Q96J65 1359 aa38.17■■■■□ 3.7
RAB40C-211ENST00000568586 ARFGEF2Q9Y6D5 1785 aa38.16■■■■□ 3.7
RAB40C-211ENST00000568586 NTSR2O95665 410 aa38.16■■■■□ 3.7
RAB40C-211ENST00000568586 WWC1Q8IX03 1113 aa38.16■■■■□ 3.7
RAB40C-211ENST00000568586 SLX4Q8IY92 1834 aa38.16■■■■□ 3.7
RAB40C-211ENST00000568586 ZC3H4Q9UPT8 1303 aaKnown RBP38.15■■■■□ 3.7
RAB40C-211ENST00000568586 ERFEQ4G0M1 354 aa38.15■■■■□ 3.7
RAB40C-211ENST00000568586 HSP90AB3PQ58FF7 597 aa38.15■■■■□ 3.7
RAB40C-211ENST00000568586 NUTM1Q86Y26 1132 aa38.15■■■■□ 3.7
RAB40C-211ENST00000568586 PPP1R42Q7Z4L9 355 aa38.14■■■■□ 3.7
RAB40C-211ENST00000568586 LTBP3Q9NS15 1303 aa38.13■■■■□ 3.7
RAB40C-211ENST00000568586 AIMP1Q12904 312 aaKnown RBP38.13■■■■□ 3.69
RAB40C-211ENST00000568586 SOGA3Q5TF21 947 aa38.13■■■■□ 3.69
RAB40C-211ENST00000568586 HYPKQ9NX55 129 aa38.13■■■■□ 3.69
RAB40C-211ENST00000568586 FER1L6Q2WGJ9 1857 aa38.11■■■■□ 3.69
RAB40C-211ENST00000568586 KIF3CO14782 793 aa38.11■■■■□ 3.69
RAB40C-211ENST00000568586 TCIRG1Q13488 830 aa38.11■■■■□ 3.69
RAB40C-211ENST00000568586 RNF123Q5XPI4 1314 aa38.11■■■■□ 3.69
RAB40C-211ENST00000568586 SLC10A5Q5PT55 438 aa38.1■■■■□ 3.69
RAB40C-211ENST00000568586 C8orf58Q8NAV2 365 aa38.1■■■■□ 3.69
RAB40C-211ENST00000568586 PLBD2Q8NHP8 589 aa38.1■■■■□ 3.69
RAB40C-211ENST00000568586 TNRC6CQ9HCJ0 1690 aaKnown RBP38.1■■■■□ 3.69
RAB40C-211ENST00000568586 IL16Q14005 1332 aa38.1■■■■□ 3.69
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms