RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 ZNF280CQ8ND82 737 aa7.43□□□□□ -1.22
HERPUD1-212ENST00000567944 CHMP3Q9Y3E7 222 aa7.43□□□□□ -1.22
HERPUD1-212ENST00000567944 VSIG8P0DPA2 414 aa7.42□□□□□ -1.22
HERPUD1-212ENST00000567944 TATP17735 454 aaPredicted RBP7.42□□□□□ -1.22
HERPUD1-212ENST00000567944 GSK3AP49840 483 aa7.42□□□□□ -1.22
HERPUD1-212ENST00000567944 PDE4CQ08493 712 aa7.42□□□□□ -1.22
HERPUD1-212ENST00000567944 RTN1Q16799 776 aa7.42□□□□□ -1.22
HERPUD1-212ENST00000567944 TNFRSF10BO14763 440 aa7.41□□□□□ -1.22
HERPUD1-212ENST00000567944 PTCD1O75127 700 aaKnown RBP7.41□□□□□ -1.22
HERPUD1-212ENST00000567944 KCNMA1Q12791 1236 aa7.41□□□□□ -1.22
HERPUD1-212ENST00000567944 ARSJQ5FYB0 599 aaPredicted RBP7.41□□□□□ -1.22
HERPUD1-212ENST00000567944 TXNDC2Q86VQ3 553 aa7.41□□□□□ -1.22
HERPUD1-212ENST00000567944 HSH2DQ96JZ2 352 aa7.41□□□□□ -1.22
HERPUD1-212ENST00000567944 SUSD3Q96L08 255 aa7.41□□□□□ -1.22
HERPUD1-212ENST00000567944 NUCKS1Q9H1E3 243 aaKnown RBP7.41□□□□□ -1.22
HERPUD1-212ENST00000567944 NDFIP2Q9NV92 336 aa7.41□□□□□ -1.22
HERPUD1-212ENST00000567944 KLK14Q9P0G3 267 aa7.41□□□□□ -1.22
HERPUD1-212ENST00000567944 DMGDHQ9UI17 866 aaKnown RBP7.41□□□□□ -1.22
HERPUD1-212ENST00000567944 GPC6Q9Y625 555 aaPredicted RBP7.41□□□□□ -1.22
HERPUD1-212ENST00000567944 BRD1O95696 1058 aa7.4□□□□□ -1.22
HERPUD1-212ENST00000567944 LBRQ14739 615 aaKnown RBP7.4□□□□□ -1.22
HERPUD1-212ENST00000567944 LRRC69Q6ZNQ3 347 aa7.4□□□□□ -1.22
HERPUD1-212ENST00000567944 NLRP8Q86W28 1048 aa7.4□□□□□ -1.22
HERPUD1-212ENST00000567944 RHPN1Q8TCX5 695 aa7.4□□□□□ -1.22
HERPUD1-212ENST00000567944 GTPBP3Q969Y2 492 aaKnown RBP7.4□□□□□ -1.22
HERPUD1-212ENST00000567944 GMCL1Q96IK5 515 aa7.4□□□□□ -1.22
HERPUD1-212ENST00000567944 ZCCHC2Q9C0B9 1178 aaKnown RBP7.4□□□□□ -1.22
HERPUD1-212ENST00000567944 H7C1W4 665 aa7.39□□□□□ -1.23
HERPUD1-212ENST00000567944 DGKZQ13574 1117 aa7.39□□□□□ -1.23
HERPUD1-212ENST00000567944 C16orf46Q6P387 395 aa7.39□□□□□ -1.23
HERPUD1-212ENST00000567944 BICDL1Q6ZP65 573 aa7.39□□□□□ -1.23
HERPUD1-212ENST00000567944 PGBD3Q8N328 593 aa7.39□□□□□ -1.23
HERPUD1-212ENST00000567944 VTI1AQ96AJ9 217 aa7.39□□□□□ -1.23
HERPUD1-212ENST00000567944 GPR25O00155 361 aa7.38□□□□□ -1.23
HERPUD1-212ENST00000567944 GAS6Q14393 721 aa7.38□□□□□ -1.23
HERPUD1-212ENST00000567944 GTF3C2Q8WUA4 911 aaPredicted RBP7.38□□□□□ -1.23
HERPUD1-212ENST00000567944 DNMT3AQ9Y6K1 912 aaPredicted RBP7.38□□□□□ -1.23
HERPUD1-212ENST00000567944 CDC14CA4D256 554 aa7.37□□□□□ -1.23
HERPUD1-212ENST00000567944 BNIP3LO60238 219 aa7.37□□□□□ -1.23
HERPUD1-212ENST00000567944 PDIA4P13667 645 aaKnown RBP7.37□□□□□ -1.23
HERPUD1-212ENST00000567944 ARID4AP29374 1257 aaPredicted RBP7.37□□□□□ -1.23
HERPUD1-212ENST00000567944 SERPINB4P48594 390 aa7.37□□□□□ -1.23
HERPUD1-212ENST00000567944 MTMR3Q13615 1198 aa7.37□□□□□ -1.23
HERPUD1-212ENST00000567944 C11orf91Q3C1V1 193 aa7.37□□□□□ -1.23
HERPUD1-212ENST00000567944 EFHC2Q5JST6 749 aa7.37□□□□□ -1.23
HERPUD1-212ENST00000567944 SAMD5Q5TGI4 173 aa7.37□□□□□ -1.23
HERPUD1-212ENST00000567944 SV2AQ7L0J3 742 aa7.37□□□□□ -1.23
HERPUD1-212ENST00000567944 ETFBKMTQ8IXQ9 262 aa7.37□□□□□ -1.23
HERPUD1-212ENST00000567944 ZBTB39O15060 712 aa7.36□□□□□ -1.23
HERPUD1-212ENST00000567944 EFSO43281 561 aa7.36□□□□□ -1.23
HERPUD1-212ENST00000567944 GRNP28799 593 aaKnown RBP7.36□□□□□ -1.23
HERPUD1-212ENST00000567944 KRT76Q01546 638 aa7.36□□□□□ -1.23
HERPUD1-212ENST00000567944 TNP2Q05952 138 aa7.36□□□□□ -1.23
HERPUD1-212ENST00000567944 ECM1Q16610 540 aa7.36□□□□□ -1.23
HERPUD1-212ENST00000567944 RNFT1Q5M7Z0 435 aa7.36□□□□□ -1.23
HERPUD1-212ENST00000567944 B4GALNT3Q6L9W6 998 aa7.36□□□□□ -1.23
HERPUD1-212ENST00000567944 HOMEZQ8IX15 550 aa7.36□□□□□ -1.23
HERPUD1-212ENST00000567944 TMEM151AQ8N4L1 468 aa7.36□□□□□ -1.23
HERPUD1-212ENST00000567944 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.36□□□□□ -1.23
HERPUD1-212ENST00000567944 GNEQ9Y223 722 aaKnown RBP7.36□□□□□ -1.23
HERPUD1-212ENST00000567944 PCDHGC4Q9Y5F7 938 aa7.36□□□□□ -1.23
HERPUD1-212ENST00000567944 TGFBR3LH3BV60 316 aa7.35□□□□□ -1.23
HERPUD1-212ENST00000567944 ATXN7O15265 892 aaPredicted RBP7.35□□□□□ -1.23
HERPUD1-212ENST00000567944 TYRO3Q06418 890 aa7.35□□□□□ -1.23
HERPUD1-212ENST00000567944 IER5Q5VY09 327 aa7.35□□□□□ -1.23
HERPUD1-212ENST00000567944 BTLAQ7Z6A9 289 aa7.35□□□□□ -1.23
HERPUD1-212ENST00000567944 HELQQ8TDG4 1101 aa7.35□□□□□ -1.23
HERPUD1-212ENST00000567944 IFT43Q96FT9 208 aa7.35□□□□□ -1.23
HERPUD1-212ENST00000567944 ABHD17AQ96GS6 310 aa7.35□□□□□ -1.23
HERPUD1-212ENST00000567944 STRN4Q9NRL3 753 aa7.35□□□□□ -1.23
HERPUD1-212ENST00000567944 OPLAHO14841 1288 aa7.34□□□□□ -1.23
HERPUD1-212ENST00000567944 GDF11O95390 407 aa7.34□□□□□ -1.23
HERPUD1-212ENST00000567944 FAM157BP0CG42 384 aa7.34□□□□□ -1.23
HERPUD1-212ENST00000567944 NPR3P17342 541 aa7.34□□□□□ -1.23
HERPUD1-212ENST00000567944 INPP5BP32019 993 aa7.34□□□□□ -1.23
HERPUD1-212ENST00000567944 GRIN2CQ14957 1233 aa7.34□□□□□ -1.23
HERPUD1-212ENST00000567944 CFHR5Q9BXR6 569 aa7.34□□□□□ -1.23
HERPUD1-212ENST00000567944 ANO2Q9NQ90 1003 aa7.34□□□□□ -1.23
HERPUD1-212ENST00000567944 STIM2Q9P246 746 aa7.34□□□□□ -1.23
HERPUD1-212ENST00000567944 ANKIB1Q9P2G1 1089 aa7.34□□□□□ -1.23
HERPUD1-212ENST00000567944 DCDC2BA2VCK2 349 aa7.33□□□□□ -1.24
HERPUD1-212ENST00000567944 MICAL2O94851 1124 aa7.33□□□□□ -1.24
HERPUD1-212ENST00000567944 MAPTP10636 758 aaKnown RBP7.33□□□□□ -1.24
HERPUD1-212ENST00000567944 RASSF7Q02833 373 aa7.33□□□□□ -1.24
HERPUD1-212ENST00000567944 ZNF211Q13398 564 aaPredicted RBP7.33□□□□□ -1.24
HERPUD1-212ENST00000567944 FIGNL1Q6PIW4 674 aa7.33□□□□□ -1.24
HERPUD1-212ENST00000567944 COL25A1Q9BXS0 654 aaPredicted RBP7.33□□□□□ -1.24
HERPUD1-212ENST00000567944 C2CD2LO14523 706 aa7.32□□□□□ -1.24
HERPUD1-212ENST00000567944 KCNA1Q09470 495 aa7.32□□□□□ -1.24
HERPUD1-212ENST00000567944 SFSWAPQ12872 951 aaKnown RBP7.32□□□□□ -1.24
HERPUD1-212ENST00000567944 TREML1Q86YW5 311 aa7.32□□□□□ -1.24
HERPUD1-212ENST00000567944 EGFL7Q9UHF1 273 aa7.32□□□□□ -1.24
HERPUD1-212ENST00000567944 ATXN7L1Q9ULK2 861 aaPredicted RBP7.32□□□□□ -1.24
HERPUD1-212ENST00000567944 GJA3Q9Y6H8 435 aa7.32□□□□□ -1.24
HERPUD1-212ENST00000567944 KHNYNO15037 678 aaKnown RBP7.31□□□□□ -1.24
HERPUD1-212ENST00000567944 ICMTO60725 284 aa7.31□□□□□ -1.24
HERPUD1-212ENST00000567944 ABL1P00519 1130 aa7.31□□□□□ -1.24
HERPUD1-212ENST00000567944 MPSTP25325 297 aa7.31□□□□□ -1.24
HERPUD1-212ENST00000567944 BRD2P25440 801 aaKnown RBP7.31□□□□□ -1.24
HERPUD1-212ENST00000567944 IDH3AP50213 366 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms