RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 GOLGB1Q14789 3259 aaKnown RBP22.27■■□□□ 1.16
COMMD4-220ENST00000567720 COL11A2P13942 1736 aaPredicted RBP22.27■■□□□ 1.16
COMMD4-220ENST00000567720 MYH16Q9H6N6 1097 aa22.27■■□□□ 1.16
COMMD4-220ENST00000567720 DDX21Q9NR30 783 aaKnown RBP eCLIP22.27■■□□□ 1.16
COMMD4-220ENST00000567720 GOLGA2Q08379 1002 aa22.26■■□□□ 1.15
COMMD4-220ENST00000567720 NFIXQ14938 502 aa22.26■■□□□ 1.15
COMMD4-220ENST00000567720 TWISTNBQ3B726 338 aaPredicted RBP22.26■■□□□ 1.15
COMMD4-220ENST00000567720 ATP10DQ9P241 1426 aa22.25■■□□□ 1.15
COMMD4-220ENST00000567720 POLRMTO00411 1230 aaKnown RBP22.25■■□□□ 1.15
COMMD4-220ENST00000567720 TM4SF1P30408 202 aa22.25■■□□□ 1.15
COMMD4-220ENST00000567720 EXOSC9Q06265 439 aaKnown RBP22.25■■□□□ 1.15
COMMD4-220ENST00000567720 TBC1D9BQ66K14 1250 aa22.25■■□□□ 1.15
COMMD4-220ENST00000567720 MAP3K15Q6ZN16 1313 aa22.25■■□□□ 1.15
COMMD4-220ENST00000567720 DBF4Q9UBU7 674 aaPredicted RBP22.24■■□□□ 1.15
COMMD4-220ENST00000567720 CARMIL3Q8ND23 1372 aa22.24■■□□□ 1.15
COMMD4-220ENST00000567720 TNRC6CQ9HCJ0 1690 aaKnown RBP22.23■■□□□ 1.15
COMMD4-220ENST00000567720 E9PSI1 815 aa22.23■■□□□ 1.15
COMMD4-220ENST00000567720 HNRNPUQ00839 825 aaKnown RBP eCLIP22.23■■□□□ 1.15
COMMD4-220ENST00000567720 HLFQ16534 295 aa22.23■■□□□ 1.15
COMMD4-220ENST00000567720 KIF6Q6ZMV9 814 aa22.23■■□□□ 1.15
COMMD4-220ENST00000567720 KLHL34Q8N239 644 aa22.23■■□□□ 1.15
COMMD4-220ENST00000567720 CDCA7LQ96GN5 454 aa22.23■■□□□ 1.15
COMMD4-220ENST00000567720 PARP3Q9Y6F1 533 aa22.23■■□□□ 1.15
COMMD4-220ENST00000567720 RGL2O15211 777 aa22.22■■□□□ 1.15
COMMD4-220ENST00000567720 SLFN5Q08AF3 891 aa22.22■■□□□ 1.15
COMMD4-220ENST00000567720 BICDL1Q6ZP65 573 aa22.22■■□□□ 1.15
COMMD4-220ENST00000567720 XAGE3Q8WTP9 111 aa22.22■■□□□ 1.15
COMMD4-220ENST00000567720 ZBTB3Q9H5J0 574 aa22.22■■□□□ 1.15
COMMD4-220ENST00000567720 PXDNLA1KZ92 1463 aa22.22■■□□□ 1.15
COMMD4-220ENST00000567720 SYT17Q9BSW7 474 aa22.21■■□□□ 1.15
COMMD4-220ENST00000567720 ZNF652Q9Y2D9 606 aa22.21■■□□□ 1.15
COMMD4-220ENST00000567720 CACNA1SQ13698 1873 aa22.21■■□□□ 1.15
COMMD4-220ENST00000567720 ERVV-1B6SEH8 477 aa22.2■■□□□ 1.14
COMMD4-220ENST00000567720 CCDC30Q5VVM6 783 aa22.2■■□□□ 1.14
COMMD4-220ENST00000567720 CLEC4GQ6UXB4 293 aa22.2■■□□□ 1.14
COMMD4-220ENST00000567720 COPS6Q7L5N1 327 aa22.2■■□□□ 1.14
COMMD4-220ENST00000567720 NLGN2Q8NFZ4 835 aa22.2■■□□□ 1.14
COMMD4-220ENST00000567720 LAMB2P55268 1798 aa22.2■■□□□ 1.14
COMMD4-220ENST00000567720 AIMP1Q12904 312 aaKnown RBP22.19■■□□□ 1.14
COMMD4-220ENST00000567720 HYPKQ9NX55 129 aa22.19■■□□□ 1.14
COMMD4-220ENST00000567720 TCERG1O14776 1098 aaKnown RBP22.18■■□□□ 1.14
COMMD4-220ENST00000567720 VAMP4O75379 141 aa22.18■■□□□ 1.14
COMMD4-220ENST00000567720 TRMT2AQ8IZ69 625 aaKnown RBP22.18■■□□□ 1.14
COMMD4-220ENST00000567720 PHAXQ9H814 394 aaKnown RBP22.18■■□□□ 1.14
COMMD4-220ENST00000567720 UTRNP46939 3433 aa22.18■■□□□ 1.14
COMMD4-220ENST00000567720 UBN2Q6ZU65 1347 aa22.17■■□□□ 1.14
COMMD4-220ENST00000567720 CD2APQ9Y5K6 639 aa22.17■■□□□ 1.14
COMMD4-220ENST00000567720 DDX60Q8IY21 1712 aaKnown RBP22.17■■□□□ 1.14
COMMD4-220ENST00000567720 ZBED9Q6R2W3 1325 aa22.16■■□□□ 1.14
COMMD4-220ENST00000567720 SERPINB2P05120 415 aa22.16■■□□□ 1.14
COMMD4-220ENST00000567720 GIGYF2Q6Y7W6 1299 aaKnown RBP22.16■■□□□ 1.14
COMMD4-220ENST00000567720 NIP7Q9Y221 180 aaKnown RBP eCLIP22.16■■□□□ 1.14
COMMD4-220ENST00000567720 ARFGEF1Q9Y6D6 1849 aa22.15■■□□□ 1.14
COMMD4-220ENST00000567720 SETDB2Q96T68 719 aa22.15■■□□□ 1.14
COMMD4-220ENST00000567720 STK31Q9BXU1 1019 aa22.15■■□□□ 1.14
COMMD4-220ENST00000567720 CHMP4AQ9BY43 222 aa22.15■■□□□ 1.14
COMMD4-220ENST00000567720 IBTKQ9P2D0 1353 aaPredicted RBP22.14■■□□□ 1.14
COMMD4-220ENST00000567720 GPTP24298 496 aa22.13■■□□□ 1.13
COMMD4-220ENST00000567720 PRR5LQ6MZQ0 368 aa22.13■■□□□ 1.13
COMMD4-220ENST00000567720 PLBD2Q8NHP8 589 aa22.13■■□□□ 1.13
COMMD4-220ENST00000567720 G2E3Q7L622 706 aa22.12■■□□□ 1.13
COMMD4-220ENST00000567720 ZNF34Q8IZ26 560 aa22.12■■□□□ 1.13
COMMD4-220ENST00000567720 CNBD1Q8NA66 436 aa22.12■■□□□ 1.13
COMMD4-220ENST00000567720 ADCY9O60503 1353 aa22.12■■□□□ 1.13
COMMD4-220ENST00000567720 ABCC12Q96J65 1359 aa22.12■■□□□ 1.13
COMMD4-220ENST00000567720 SLC4A2P04920 1241 aa22.1■■□□□ 1.13
COMMD4-220ENST00000567720 ANKRD13DQ6ZTN6 518 aa22.1■■□□□ 1.13
COMMD4-220ENST00000567720 NBPF5PQ86XG9 351 aaPredicted RBP22.1■■□□□ 1.13
COMMD4-220ENST00000567720 CCDC24Q8N4L8 307 aa22.1■■□□□ 1.13
COMMD4-220ENST00000567720 RIC1Q4ADV7 1423 aa22.09■■□□□ 1.13
COMMD4-220ENST00000567720 FAM177BA6PVY3 158 aa22.09■■□□□ 1.13
COMMD4-220ENST00000567720 NTSR2O95665 410 aa22.08■■□□□ 1.13
COMMD4-220ENST00000567720 FLIIQ13045 1269 aa22.08■■□□□ 1.13
COMMD4-220ENST00000567720 HSP90AB3PQ58FF7 597 aa22.08■■□□□ 1.13
COMMD4-220ENST00000567720 MYH3P11055 1940 aa22.08■■□□□ 1.12
COMMD4-220ENST00000567720 TCIRG1Q13488 830 aa22.07■■□□□ 1.12
COMMD4-220ENST00000567720 SUSD4Q5VX71 490 aa22.07■■□□□ 1.12
COMMD4-220ENST00000567720 TGFB2P61812 414 aa22.06■■□□□ 1.12
COMMD4-220ENST00000567720 ST5P78524 1137 aa22.06■■□□□ 1.12
COMMD4-220ENST00000567720 RIC3Q7Z5B4 369 aa22.06■■□□□ 1.12
COMMD4-220ENST00000567720 NLRP10Q86W26 655 aa22.06■■□□□ 1.12
COMMD4-220ENST00000567720 NPHP1O15259 732 aa22.05■■□□□ 1.12
COMMD4-220ENST00000567720 DDX58O95786 925 aaKnown RBP22.05■■□□□ 1.12
COMMD4-220ENST00000567720 DPEP1P16444 411 aa22.05■■□□□ 1.12
COMMD4-220ENST00000567720 CHRNA5P30532 468 aa22.05■■□□□ 1.12
COMMD4-220ENST00000567720 PARP10Q53GL7 1025 aa22.05■■□□□ 1.12
COMMD4-220ENST00000567720 NUTM1Q86Y26 1132 aa22.05■■□□□ 1.12
COMMD4-220ENST00000567720 ISCA1Q9BUE6 129 aa22.05■■□□□ 1.12
COMMD4-220ENST00000567720 CHD4Q14839 1912 aa22.05■■□□□ 1.12
COMMD4-220ENST00000567720 A0A0G2JLW4 131 aa22.04■■□□□ 1.12
COMMD4-220ENST00000567720 PI4KAP2A4QPH2 592 aa22.04■■□□□ 1.12
COMMD4-220ENST00000567720 ATP5J2-PTCD1G3V325 749 aa22.04■■□□□ 1.12
COMMD4-220ENST00000567720 PI4KAP1Q8N8J0 262 aa22.04■■□□□ 1.12
COMMD4-220ENST00000567720 NYXQ9GZU5 481 aa22.04■■□□□ 1.12
COMMD4-220ENST00000567720 WWC3Q9ULE0 1092 aa22.04■■□□□ 1.12
COMMD4-220ENST00000567720 MAP3K2Q9Y2U5 619 aa22.04■■□□□ 1.12
COMMD4-220ENST00000567720 KCNA3P22001 575 aa22.03■■□□□ 1.12
COMMD4-220ENST00000567720 FKBP5Q13451 457 aaPredicted RBP22.03■■□□□ 1.12
COMMD4-220ENST00000567720 KSR2Q6VAB6 950 aa22.03■■□□□ 1.12
COMMD4-220ENST00000567720 TPTE2Q6XPS3 522 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms