RNA–Protein interactions for RNA: ENST00000567400.1

GINS3-207, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-207ENST00000567400 PDIA6Q15084 440 aa9.9□□□□□ -0.82
GINS3-207ENST00000567400 NEUROD2Q15784 382 aa9.9□□□□□ -0.82
GINS3-207ENST00000567400 KRT24Q2M2I5 525 aa9.9□□□□□ -0.82
GINS3-207ENST00000567400 TTLL7Q6ZT98 887 aa9.9□□□□□ -0.82
GINS3-207ENST00000567400 GPBP1L1Q9HC44 474 aaPredicted RBP9.9□□□□□ -0.82
GINS3-207ENST00000567400 ARFGEF2Q9Y6D5 1785 aa9.9□□□□□ -0.82
GINS3-207ENST00000567400 CACNA1SQ13698 1873 aa9.89□□□□□ -0.83
GINS3-207ENST00000567400 SLX4Q8IY92 1834 aa9.89□□□□□ -0.83
GINS3-207ENST00000567400 NFKBIEO00221 500 aa9.89□□□□□ -0.83
GINS3-207ENST00000567400 CHL1O00533 1208 aa9.89□□□□□ -0.83
GINS3-207ENST00000567400 RASSF7Q02833 373 aa9.89□□□□□ -0.83
GINS3-207ENST00000567400 LMOD3Q0VAK6 560 aa9.89□□□□□ -0.83
GINS3-207ENST00000567400 PROSER3Q2NL68 480 aa9.89□□□□□ -0.83
GINS3-207ENST00000567400 C9orf131Q5VYM1 1079 aa9.89□□□□□ -0.83
GINS3-207ENST00000567400 NPM2Q86SE8 214 aaKnown RBP9.89□□□□□ -0.83
GINS3-207ENST00000567400 TTLL6Q8N841 843 aa9.89□□□□□ -0.83
GINS3-207ENST00000567400 BABAM1Q9NWV8 329 aa9.89□□□□□ -0.83
GINS3-207ENST00000567400 FER1L6Q2WGJ9 1857 aa9.89□□□□□ -0.83
GINS3-207ENST00000567400 ABCC12Q96J65 1359 aa9.88□□□□□ -0.83
GINS3-207ENST00000567400 ERBB4Q15303 1308 aa9.88□□□□□ -0.83
GINS3-207ENST00000567400 MAP3K15Q6ZN16 1313 aa9.88□□□□□ -0.83
GINS3-207ENST00000567400 UBN2Q6ZU65 1347 aa9.88□□□□□ -0.83
GINS3-207ENST00000567400 TIAM2Q8IVF5 1701 aa9.88□□□□□ -0.83
GINS3-207ENST00000567400 KLRG2A4D1S0 409 aaPredicted RBP9.88□□□□□ -0.83
GINS3-207ENST00000567400 H0YIN7 160 aa9.88□□□□□ -0.83
GINS3-207ENST00000567400 KIF3CO14782 793 aa9.88□□□□□ -0.83
GINS3-207ENST00000567400 ANXA1P04083 346 aa9.88□□□□□ -0.83
GINS3-207ENST00000567400 SRGNP10124 158 aa9.88□□□□□ -0.83
GINS3-207ENST00000567400 MYL6BP14649 208 aa9.88□□□□□ -0.83
GINS3-207ENST00000567400 PDE6BP35913 854 aa9.88□□□□□ -0.83
GINS3-207ENST00000567400 ZEB1P37275 1124 aaPredicted RBP9.88□□□□□ -0.83
GINS3-207ENST00000567400 NBPF5PQ86XG9 351 aaPredicted RBP9.88□□□□□ -0.83
GINS3-207ENST00000567400 NGEFQ8N5V2 710 aa9.88□□□□□ -0.83
GINS3-207ENST00000567400 NIP7Q9Y221 180 aaKnown RBP eCLIP9.88□□□□□ -0.83
GINS3-207ENST00000567400 ZNF652Q9Y2D9 606 aa9.88□□□□□ -0.83
GINS3-207ENST00000567400 ERVV-1B6SEH8 477 aa9.87□□□□□ -0.83
GINS3-207ENST00000567400 APAF1O14727 1248 aa9.87□□□□□ -0.83
GINS3-207ENST00000567400 ZBTB3Q9H5J0 574 aa9.87□□□□□ -0.83
GINS3-207ENST00000567400 RNF181Q9P0P0 153 aa9.87□□□□□ -0.83
GINS3-207ENST00000567400 FAM177BA6PVY3 158 aa9.86□□□□□ -0.83
GINS3-207ENST00000567400 ZNF853P0CG23 659 aa9.86□□□□□ -0.83
GINS3-207ENST00000567400 EIF2S2P20042 333 aaKnown RBP9.86□□□□□ -0.83
GINS3-207ENST00000567400 ST5P78524 1137 aa9.86□□□□□ -0.83
GINS3-207ENST00000567400 CCDC88AQ3V6T2 1871 aa9.86□□□□□ -0.83
GINS3-207ENST00000567400 STYK1Q6J9G0 422 aa9.86□□□□□ -0.83
GINS3-207ENST00000567400 PRPF40BQ6NWY9 871 aaKnown RBP9.86□□□□□ -0.83
GINS3-207ENST00000567400 ZNF622Q969S3 477 aaKnown RBP eCLIP9.86□□□□□ -0.83
GINS3-207ENST00000567400 NMRK2Q9NPI5 230 aa9.86□□□□□ -0.83
GINS3-207ENST00000567400 RIC1Q4ADV7 1423 aa9.85□□□□□ -0.83
GINS3-207ENST00000567400 SNED1Q8TER0 1413 aa9.85□□□□□ -0.83
GINS3-207ENST00000567400 ZNF316A6NFI3 1004 aaPredicted RBP9.85□□□□□ -0.83
GINS3-207ENST00000567400 NPHP1O15259 732 aa9.85□□□□□ -0.83
GINS3-207ENST00000567400 C21orf2O43822 256 aa9.85□□□□□ -0.83
GINS3-207ENST00000567400 GPTP24298 496 aa9.85□□□□□ -0.83
GINS3-207ENST00000567400 CRY2Q49AN0 593 aa9.85□□□□□ -0.83
GINS3-207ENST00000567400 GIGYF2Q6Y7W6 1299 aaKnown RBP9.85□□□□□ -0.83
GINS3-207ENST00000567400 NUTM1Q86Y26 1132 aa9.85□□□□□ -0.83
GINS3-207ENST00000567400 ZNF34Q8IZ26 560 aa9.85□□□□□ -0.83
GINS3-207ENST00000567400 C7orf43Q8WVR3 580 aa9.85□□□□□ -0.83
GINS3-207ENST00000567400 NECTIN2Q92692 538 aa9.85□□□□□ -0.83
GINS3-207ENST00000567400 CFAP44Q96MT7 982 aa9.85□□□□□ -0.83
GINS3-207ENST00000567400 MBIPQ9NS73 344 aa9.85□□□□□ -0.83
GINS3-207ENST00000567400 ZNF219Q9P2Y4 722 aaPredicted RBP9.85□□□□□ -0.83
GINS3-207ENST00000567400 PDZRN3Q9UPQ7 1066 aa9.85□□□□□ -0.83
GINS3-207ENST00000567400 ANKRD36CQ5JPF3 1778 aa9.85□□□□□ -0.83
GINS3-207ENST00000567400 IBTKQ9P2D0 1353 aaPredicted RBP9.85□□□□□ -0.83
GINS3-207ENST00000567400 SENP3-EIF4A1A0A087X0R7 540 aa9.84□□□□□ -0.83
GINS3-207ENST00000567400 NTSR2O95665 410 aa9.84□□□□□ -0.83
GINS3-207ENST00000567400 LMNB1P20700 586 aa9.84□□□□□ -0.83
GINS3-207ENST00000567400 ERFEQ4G0M1 354 aa9.84□□□□□ -0.83
GINS3-207ENST00000567400 SUSD4Q5VX71 490 aa9.84□□□□□ -0.83
GINS3-207ENST00000567400 OLFM4Q6UX06 510 aa9.84□□□□□ -0.83
GINS3-207ENST00000567400 TPTE2Q6XPS3 522 aa9.84□□□□□ -0.83
GINS3-207ENST00000567400 KIF6Q6ZMV9 814 aa9.84□□□□□ -0.83
GINS3-207ENST00000567400 SLC51AQ86UW1 340 aa9.84□□□□□ -0.83
GINS3-207ENST00000567400 MASTLQ96GX5 879 aa9.84□□□□□ -0.83
GINS3-207ENST00000567400 CHPF2Q9P2E5 772 aa9.84□□□□□ -0.83
GINS3-207ENST00000567400 LAS1LQ9Y4W2 734 aaKnown RBP9.84□□□□□ -0.83
GINS3-207ENST00000567400 DICER1Q9UPY3 1922 aaKnown RBP9.84□□□□□ -0.83
GINS3-207ENST00000567400 NPR1P16066 1061 aa9.83□□□□□ -0.84
GINS3-207ENST00000567400 C3orf67Q6ZVT6 689 aa9.83□□□□□ -0.84
GINS3-207ENST00000567400 XAGE3Q8WTP9 111 aa9.83□□□□□ -0.84
GINS3-207ENST00000567400 CNKSR1Q969H4 720 aa9.83□□□□□ -0.84
GINS3-207ENST00000567400 DDX21Q9NR30 783 aaKnown RBP eCLIP9.83□□□□□ -0.84
GINS3-207ENST00000567400 LTBP3Q9NS15 1303 aa9.82□□□□□ -0.84
GINS3-207ENST00000567400 ZC3H4Q9UPT8 1303 aaKnown RBP9.82□□□□□ -0.84
GINS3-207ENST00000567400 HOXB7P09629 217 aa9.82□□□□□ -0.84
GINS3-207ENST00000567400 DUSP27Q5VZP5 1158 aa9.82□□□□□ -0.84
GINS3-207ENST00000567400 COPS6Q7L5N1 327 aa9.82□□□□□ -0.84
GINS3-207ENST00000567400 IFT57Q9NWB7 429 aa9.82□□□□□ -0.84
GINS3-207ENST00000567400 LAMB2P55268 1798 aa9.82□□□□□ -0.84
GINS3-207ENST00000567400 AIMP1Q12904 312 aaKnown RBP9.81□□□□□ -0.84
GINS3-207ENST00000567400 HDGFL1Q5TGJ6 251 aa9.81□□□□□ -0.84
GINS3-207ENST00000567400 NYXQ9GZU5 481 aa9.81□□□□□ -0.84
GINS3-207ENST00000567400 TAOK3Q9H2K8 898 aa9.81□□□□□ -0.84
GINS3-207ENST00000567400 COL4A5P29400 1685 aa9.8□□□□□ -0.84
GINS3-207ENST00000567400 DDX60Q8IY21 1712 aaKnown RBP9.8□□□□□ -0.84
GINS3-207ENST00000567400 WDR90Q96KV7 1748 aa9.8□□□□□ -0.84
GINS3-207ENST00000567400 GLTPD2A6NH11 291 aa9.8□□□□□ -0.84
GINS3-207ENST00000567400 GTF2E1P29083 439 aaPredicted RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms