RNA–Protein interactions for RNA: ENST00000567195.5

COMMD4-217, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-217ENST00000567195 CHD4Q14839 1912 aa20.26■□□□□ 0.83
COMMD4-217ENST00000567195 ANXA1P04083 346 aa20.26■□□□□ 0.83
COMMD4-217ENST00000567195 TGFB2P61812 414 aa20.26■□□□□ 0.83
COMMD4-217ENST00000567195 TTLL7Q6ZT98 887 aa20.26■□□□□ 0.83
COMMD4-217ENST00000567195 C8orf58Q8NAV2 365 aa20.26■□□□□ 0.83
COMMD4-217ENST00000567195 DBF4Q9UBU7 674 aaPredicted RBP20.26■□□□□ 0.83
COMMD4-217ENST00000567195 C10orf71Q711Q0 1435 aa20.26■□□□□ 0.83
COMMD4-217ENST00000567195 BCORQ6W2J9 1755 aa20.26■□□□□ 0.83
COMMD4-217ENST00000567195 CARMIL3Q8ND23 1372 aa20.25■□□□□ 0.83
COMMD4-217ENST00000567195 PROSER3Q2NL68 480 aa20.25■□□□□ 0.83
COMMD4-217ENST00000567195 CHPF2Q9P2E5 772 aa20.25■□□□□ 0.83
COMMD4-217ENST00000567195 NPHP1O15259 732 aa20.24■□□□□ 0.83
COMMD4-217ENST00000567195 HLFQ16534 295 aa20.24■□□□□ 0.83
COMMD4-217ENST00000567195 LRP10Q7Z4F1 713 aa20.24■□□□□ 0.83
COMMD4-217ENST00000567195 ZBTB3Q9H5J0 574 aa20.24■□□□□ 0.83
COMMD4-217ENST00000567195 GOLGA2Q08379 1002 aa20.23■□□□□ 0.83
COMMD4-217ENST00000567195 AIMP1Q12904 312 aaKnown RBP20.23■□□□□ 0.83
COMMD4-217ENST00000567195 CCDC30Q5VVM6 783 aa20.23■□□□□ 0.83
COMMD4-217ENST00000567195 COPS6Q7L5N1 327 aa20.23■□□□□ 0.83
COMMD4-217ENST00000567195 MYH16Q9H6N6 1097 aa20.23■□□□□ 0.83
COMMD4-217ENST00000567195 HYPKQ9NX55 129 aa20.23■□□□□ 0.83
COMMD4-217ENST00000567195 NIP7Q9Y221 180 aaKnown RBP eCLIP20.23■□□□□ 0.83
COMMD4-217ENST00000567195 FANCIQ9NVI1 1328 aa20.23■□□□□ 0.83
COMMD4-217ENST00000567195 YY1P25490 414 aa20.22■□□□□ 0.83
COMMD4-217ENST00000567195 TSPYL6Q8N831 410 aa20.22■□□□□ 0.83
COMMD4-217ENST00000567195 XAGE3Q8WTP9 111 aa20.22■□□□□ 0.83
COMMD4-217ENST00000567195 KIF13BQ9NQT8 1826 aa20.22■□□□□ 0.83
COMMD4-217ENST00000567195 TWISTNBQ3B726 338 aaPredicted RBP20.21■□□□□ 0.83
COMMD4-217ENST00000567195 AFDNP55196 1824 aaKnown RBP20.2■□□□□ 0.82
COMMD4-217ENST00000567195 NRXN2Q9P2S2 1712 aa20.2■□□□□ 0.82
COMMD4-217ENST00000567195 A0A0G2JLW4 131 aa20.2■□□□□ 0.82
COMMD4-217ENST00000567195 GIGYF2Q6Y7W6 1299 aaKnown RBP20.2■□□□□ 0.82
COMMD4-217ENST00000567195 NBPF5PQ86XG9 351 aaPredicted RBP20.2■□□□□ 0.82
COMMD4-217ENST00000567195 CNBD1Q8NA66 436 aa20.2■□□□□ 0.82
COMMD4-217ENST00000567195 ZNF521Q96K83 1311 aa20.2■□□□□ 0.82
COMMD4-217ENST00000567195 GOLGB1Q14789 3259 aaKnown RBP20.2■□□□□ 0.82
COMMD4-217ENST00000567195 UTRNP46939 3433 aa20.2■□□□□ 0.82
COMMD4-217ENST00000567195 PXDNLA1KZ92 1463 aa20.19■□□□□ 0.82
COMMD4-217ENST00000567195 DPEP1P16444 411 aa20.19■□□□□ 0.82
COMMD4-217ENST00000567195 ST5P78524 1137 aa20.19■□□□□ 0.82
COMMD4-217ENST00000567195 PRR5LQ6MZQ0 368 aa20.19■□□□□ 0.82
COMMD4-217ENST00000567195 TPTE2Q6XPS3 522 aa20.19■□□□□ 0.82
COMMD4-217ENST00000567195 EXOSC9Q06265 439 aaKnown RBP20.18■□□□□ 0.82
COMMD4-217ENST00000567195 HSP90AB3PQ58FF7 597 aa20.18■□□□□ 0.82
COMMD4-217ENST00000567195 STK31Q9BXU1 1019 aa20.18■□□□□ 0.82
COMMD4-217ENST00000567195 SPINK5Q9NQ38 1064 aaPredicted RBP20.18■□□□□ 0.82
COMMD4-217ENST00000567195 ATP10DQ9P241 1426 aa20.18■□□□□ 0.82
COMMD4-217ENST00000567195 FAM177BA6PVY3 158 aa20.17■□□□□ 0.82
COMMD4-217ENST00000567195 GTF2E1P29083 439 aaPredicted RBP20.17■□□□□ 0.82
COMMD4-217ENST00000567195 ANKRD13DQ6ZTN6 518 aa20.17■□□□□ 0.82
COMMD4-217ENST00000567195 BRIP1Q9BX63 1249 aa20.17■□□□□ 0.82
COMMD4-217ENST00000567195 NYXQ9GZU5 481 aa20.17■□□□□ 0.82
COMMD4-217ENST00000567195 NUP98P52948 1817 aa20.17■□□□□ 0.82
COMMD4-217ENST00000567195 GPTP24298 496 aa20.16■□□□□ 0.82
COMMD4-217ENST00000567195 PDE6BP35913 854 aa20.16■□□□□ 0.82
COMMD4-217ENST00000567195 PLBD2Q8NHP8 589 aa20.16■□□□□ 0.82
COMMD4-217ENST00000567195 PIM2Q9P1W9 311 aa20.16■□□□□ 0.82
COMMD4-217ENST00000567195 WWC3Q9ULE0 1092 aa20.16■□□□□ 0.82
COMMD4-217ENST00000567195 PDZRN3Q9UPQ7 1066 aa20.16■□□□□ 0.82
COMMD4-217ENST00000567195 N4BP2Q86UW6 1770 aaPredicted RBP20.16■□□□□ 0.82
COMMD4-217ENST00000567195 E9PSI1 815 aa20.15■□□□□ 0.82
COMMD4-217ENST00000567195 H0YIN7 160 aa20.15■□□□□ 0.82
COMMD4-217ENST00000567195 YBX3P16989 372 aaKnown RBP eCLIP20.15■□□□□ 0.82
COMMD4-217ENST00000567195 CHRNA5P30532 468 aa20.15■□□□□ 0.82
COMMD4-217ENST00000567195 ZNF34Q8IZ26 560 aa20.15■□□□□ 0.82
COMMD4-217ENST00000567195 CCDC24Q8N4L8 307 aa20.15■□□□□ 0.82
COMMD4-217ENST00000567195 KCNA3P22001 575 aa20.14■□□□□ 0.81
COMMD4-217ENST00000567195 PARP10Q53GL7 1025 aa20.14■□□□□ 0.81
COMMD4-217ENST00000567195 PPP1R42Q7Z4L9 355 aa20.14■□□□□ 0.81
COMMD4-217ENST00000567195 C2CD5Q86YS7 1000 aa20.14■□□□□ 0.81
COMMD4-217ENST00000567195 PHAXQ9H814 394 aaKnown RBP20.14■□□□□ 0.81
COMMD4-217ENST00000567195 BCS1LQ9Y276 419 aa20.14■□□□□ 0.81
COMMD4-217ENST00000567195 KIAA1551Q9HCM1 1747 aa20.13■□□□□ 0.81
COMMD4-217ENST00000567195 VAMP4O75379 141 aa20.13■□□□□ 0.81
COMMD4-217ENST00000567195 DDX58O95786 925 aaKnown RBP20.13■□□□□ 0.81
COMMD4-217ENST00000567195 TCIRG1Q13488 830 aa20.13■□□□□ 0.81
COMMD4-217ENST00000567195 RIC3Q7Z5B4 369 aa20.13■□□□□ 0.81
COMMD4-217ENST00000567195 UBN2Q6ZU65 1347 aa20.12■□□□□ 0.81
COMMD4-217ENST00000567195 TCERG1O14776 1098 aaKnown RBP20.12■□□□□ 0.81
COMMD4-217ENST00000567195 SUSD4Q5VX71 490 aa20.12■□□□□ 0.81
COMMD4-217ENST00000567195 IBTKQ9P2D0 1353 aaPredicted RBP20.11■□□□□ 0.81
COMMD4-217ENST00000567195 SLC4A2P04920 1241 aa20.11■□□□□ 0.81
COMMD4-217ENST00000567195 SLFN5Q08AF3 891 aa20.11■□□□□ 0.81
COMMD4-217ENST00000567195 DALRD3Q5D0E6 543 aaKnown RBP20.11■□□□□ 0.81
COMMD4-217ENST00000567195 UTP14AQ9BVJ6 771 aaKnown RBP20.1■□□□□ 0.81
COMMD4-217ENST00000567195 NUTM1Q86Y26 1132 aa20.09■□□□□ 0.81
COMMD4-217ENST00000567195 ZNF622Q969S3 477 aaKnown RBP eCLIP20.09■□□□□ 0.81
COMMD4-217ENST00000567195 ANKRD31Q8N7Z5 1873 aa20.08■□□□□ 0.81
COMMD4-217ENST00000567195 NTSR2O95665 410 aa20.08■□□□□ 0.81
COMMD4-217ENST00000567195 ERFEQ4G0M1 354 aa20.08■□□□□ 0.81
COMMD4-217ENST00000567195 NLRP10Q86W26 655 aa20.08■□□□□ 0.81
COMMD4-217ENST00000567195 TTLL6Q8N841 843 aa20.08■□□□□ 0.81
COMMD4-217ENST00000567195 BRCA1P38398 1863 aaKnown RBP20.07■□□□□ 0.8
COMMD4-217ENST00000567195 RNF123Q5XPI4 1314 aa20.07■□□□□ 0.8
COMMD4-217ENST00000567195 CDCA7LQ96GN5 454 aa20.07■□□□□ 0.8
COMMD4-217ENST00000567195 MASTLQ96GX5 879 aa20.07■□□□□ 0.8
COMMD4-217ENST00000567195 ANKRD36CQ5JPF3 1778 aa20.07■□□□□ 0.8
COMMD4-217ENST00000567195 ATP5J2-PTCD1G3V325 749 aa20.06■□□□□ 0.8
COMMD4-217ENST00000567195 SRGNP10124 158 aa20.06■□□□□ 0.8
COMMD4-217ENST00000567195 HNRNPUQ00839 825 aaKnown RBP eCLIP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms