RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 CT47B1P0C2W7 299 aaPredicted RBP21.55■■□□□ 1.04
CLN6-208ENST00000567060 IL6STP40189 918 aaPredicted RBP21.55■■□□□ 1.04
CLN6-208ENST00000567060 FKBP8Q14318 412 aa21.55■■□□□ 1.04
CLN6-208ENST00000567060 SPINK5Q9NQ38 1064 aaPredicted RBP21.55■■□□□ 1.04
CLN6-208ENST00000567060 DDR1Q08345 913 aa21.54■■□□□ 1.04
CLN6-208ENST00000567060 NPM2Q86SE8 214 aaKnown RBP21.54■■□□□ 1.04
CLN6-208ENST00000567060 ZNF428Q96B54 188 aa21.54■■□□□ 1.04
CLN6-208ENST00000567060 A0A087WZG4 1122 aa21.53■■□□□ 1.04
CLN6-208ENST00000567060 TWISTNBQ3B726 338 aaPredicted RBP21.53■■□□□ 1.04
CLN6-208ENST00000567060 DALRD3Q5D0E6 543 aaKnown RBP21.52■■□□□ 1.04
CLN6-208ENST00000567060 HDGFL1Q5TGJ6 251 aa21.52■■□□□ 1.04
CLN6-208ENST00000567060 JMYQ8N9B5 988 aa21.52■■□□□ 1.04
CLN6-208ENST00000567060 C8orf58Q8NAV2 365 aa21.52■■□□□ 1.04
CLN6-208ENST00000567060 KLRG1Q96E93 195 aa21.52■■□□□ 1.04
CLN6-208ENST00000567060 ZBTB1Q9Y2K1 713 aa21.52■■□□□ 1.04
CLN6-208ENST00000567060 ARFGEF1Q9Y6D6 1849 aa21.52■■□□□ 1.04
CLN6-208ENST00000567060 USP42Q9H9J4 1324 aaKnown RBP21.52■■□□□ 1.03
CLN6-208ENST00000567060 CACNA1FO60840 1977 aa21.51■■□□□ 1.03
CLN6-208ENST00000567060 PRAMEF22A3QJZ6 481 aa21.51■■□□□ 1.03
CLN6-208ENST00000567060 RGL2O15211 777 aa21.51■■□□□ 1.03
CLN6-208ENST00000567060 CHRNA5P30532 468 aa21.51■■□□□ 1.03
CLN6-208ENST00000567060 EIF5P55010 431 aaKnown RBP21.51■■□□□ 1.03
CLN6-208ENST00000567060 FSTL1Q12841 308 aa21.51■■□□□ 1.03
CLN6-208ENST00000567060 CCDC30Q5VVM6 783 aa21.51■■□□□ 1.03
CLN6-208ENST00000567060 RRAGCQ9HB90 399 aa21.51■■□□□ 1.03
CLN6-208ENST00000567060 DBF4Q9UBU7 674 aaPredicted RBP21.51■■□□□ 1.03
CLN6-208ENST00000567060 WDR90Q96KV7 1748 aa21.5■■□□□ 1.03
CLN6-208ENST00000567060 TM4SF1P30408 202 aa21.5■■□□□ 1.03
CLN6-208ENST00000567060 EXOSC9Q06265 439 aaKnown RBP21.5■■□□□ 1.03
CLN6-208ENST00000567060 KRT24Q2M2I5 525 aa21.5■■□□□ 1.03
CLN6-208ENST00000567060 COL13A1Q5TAT6 717 aaPredicted RBP21.5■■□□□ 1.03
CLN6-208ENST00000567060 C16orf71Q8IYS4 520 aaPredicted RBP21.5■■□□□ 1.03
CLN6-208ENST00000567060 CDCA7LQ96GN5 454 aa21.5■■□□□ 1.03
CLN6-208ENST00000567060 RNF181Q9P0P0 153 aa21.5■■□□□ 1.03
CLN6-208ENST00000567060 A1BGP04217 495 aa21.49■■□□□ 1.03
CLN6-208ENST00000567060 EIF2S2P20042 333 aaKnown RBP21.49■■□□□ 1.03
CLN6-208ENST00000567060 DDX21Q9NR30 783 aaKnown RBP eCLIP21.49■■□□□ 1.03
CLN6-208ENST00000567060 COL15A1P39059 1388 aa21.48■■□□□ 1.03
CLN6-208ENST00000567060 POLRMTO00411 1230 aaKnown RBP21.48■■□□□ 1.03
CLN6-208ENST00000567060 VAMP4O75379 141 aa21.48■■□□□ 1.03
CLN6-208ENST00000567060 CANXP27824 592 aaKnown RBP21.48■■□□□ 1.03
CLN6-208ENST00000567060 KDM2BQ8NHM5 1336 aa21.48■■□□□ 1.03
CLN6-208ENST00000567060 TSPYL6Q8N831 410 aa21.47■■□□□ 1.03
CLN6-208ENST00000567060 HYPKQ9NX55 129 aa21.47■■□□□ 1.03
CLN6-208ENST00000567060 NBPF26B4DH59 902 aa21.46■■□□□ 1.03
CLN6-208ENST00000567060 ELL2O00472 640 aaPredicted RBP21.46■■□□□ 1.03
CLN6-208ENST00000567060 NBPF10Q6P3W6 841 aaKnown RBP21.46■■□□□ 1.03
CLN6-208ENST00000567060 NBPF15Q8N660 670 aa21.46■■□□□ 1.03
CLN6-208ENST00000567060 STK31Q9BXU1 1019 aa21.46■■□□□ 1.03
CLN6-208ENST00000567060 SBF1O95248 1867 aa21.45■■□□□ 1.02
CLN6-208ENST00000567060 PDIA6Q15084 440 aa21.45■■□□□ 1.02
CLN6-208ENST00000567060 PRELPP51888 382 aa21.44■■□□□ 1.02
CLN6-208ENST00000567060 NARFQ9UHQ1 456 aa21.44■■□□□ 1.02
CLN6-208ENST00000567060 ZPR1O75312 459 aa21.43■■□□□ 1.02
CLN6-208ENST00000567060 USPL1Q5W0Q7 1092 aa21.43■■□□□ 1.02
CLN6-208ENST00000567060 LRP10Q7Z4F1 713 aa21.43■■□□□ 1.02
CLN6-208ENST00000567060 CHPF2Q9P2E5 772 aa21.43■■□□□ 1.02
CLN6-208ENST00000567060 ALDH1L2Q3SY69 923 aa21.42■■□□□ 1.02
CLN6-208ENST00000567060 ERVV-1B6SEH8 477 aa21.41■■□□□ 1.02
CLN6-208ENST00000567060 RASSF7Q02833 373 aa21.41■■□□□ 1.02
CLN6-208ENST00000567060 CLEC4GQ6UXB4 293 aa21.41■■□□□ 1.02
CLN6-208ENST00000567060 DZIP3Q86Y13 1208 aaKnown RBP21.41■■□□□ 1.02
CLN6-208ENST00000567060 MYL6BP14649 208 aa21.4■■□□□ 1.02
CLN6-208ENST00000567060 KIF6Q6ZMV9 814 aa21.4■■□□□ 1.02
CLN6-208ENST00000567060 SMC1BQ8NDV3 1235 aa21.4■■□□□ 1.02
CLN6-208ENST00000567060 ZNF652Q9Y2D9 606 aa21.4■■□□□ 1.02
CLN6-208ENST00000567060 NFIXQ14938 502 aa21.39■■□□□ 1.01
CLN6-208ENST00000567060 NECTIN2Q92692 538 aa21.39■■□□□ 1.01
CLN6-208ENST00000567060 BCL2L12Q9HB09 334 aa21.39■■□□□ 1.01
CLN6-208ENST00000567060 ZNF330Q9Y3S2 320 aaPredicted RBP21.39■■□□□ 1.01
CLN6-208ENST00000567060 SCN7AQ01118 1682 aa21.39■■□□□ 1.01
CLN6-208ENST00000567060 BCORQ6W2J9 1755 aa21.38■■□□□ 1.01
CLN6-208ENST00000567060 MAP3K15Q6ZN16 1313 aa21.38■■□□□ 1.01
CLN6-208ENST00000567060 GLTPD2A6NH11 291 aa21.37■■□□□ 1.01
CLN6-208ENST00000567060 CAMTA2O94983 1202 aa21.37■■□□□ 1.01
CLN6-208ENST00000567060 DDX58O95786 925 aaKnown RBP21.37■■□□□ 1.01
CLN6-208ENST00000567060 SLC4A2P04920 1241 aa21.37■■□□□ 1.01
CLN6-208ENST00000567060 PIP4K2AP48426 406 aaPredicted RBP21.37■■□□□ 1.01
CLN6-208ENST00000567060 BRPF1P55201 1214 aaPredicted RBP21.37■■□□□ 1.01
CLN6-208ENST00000567060 PROSER3Q2NL68 480 aa21.37■■□□□ 1.01
CLN6-208ENST00000567060 ZC3H4Q9UPT8 1303 aaKnown RBP21.36■■□□□ 1.01
CLN6-208ENST00000567060 COPS6Q7L5N1 327 aa21.36■■□□□ 1.01
CLN6-208ENST00000567060 TBC1D2BQ9UPU7 963 aa21.36■■□□□ 1.01
CLN6-208ENST00000567060 TNRC6CQ9HCJ0 1690 aaKnown RBP21.36■■□□□ 1.01
CLN6-208ENST00000567060 VEGFAP15692 232 aaPredicted RBP21.35■■□□□ 1.01
CLN6-208ENST00000567060 LMNB1P20700 586 aa21.35■■□□□ 1.01
CLN6-208ENST00000567060 HSP90AB3PQ58FF7 597 aa21.35■■□□□ 1.01
CLN6-208ENST00000567060 PLBD2Q8NHP8 589 aa21.35■■□□□ 1.01
CLN6-208ENST00000567060 XAGE3Q8WTP9 111 aa21.35■■□□□ 1.01
CLN6-208ENST00000567060 POTECB2RU33 542 aa21.34■■□□□ 1.01
CLN6-208ENST00000567060 CAPN15O75808 1086 aa21.34■■□□□ 1.01
CLN6-208ENST00000567060 SERPINB2P05120 415 aa21.34■■□□□ 1.01
CLN6-208ENST00000567060 ANKRD13DQ6ZTN6 518 aa21.34■■□□□ 1.01
CLN6-208ENST00000567060 YTHDC1Q96MU7 727 aaKnown RBP21.34■■□□□ 1.01
CLN6-208ENST00000567060 AFDNP55196 1824 aaKnown RBP21.34■■□□□ 1.01
CLN6-208ENST00000567060 ANXA1P04083 346 aa21.33■■□□□ 1.01
CLN6-208ENST00000567060 GIGYF2Q6Y7W6 1299 aaKnown RBP21.33■■□□□ 1.01
CLN6-208ENST00000567060 TNS4Q8IZW8 715 aa21.33■■□□□ 1.01
CLN6-208ENST00000567060 TTLL6Q8N841 843 aa21.33■■□□□ 1.01
CLN6-208ENST00000567060 NRXN2Q9P2S2 1712 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 550.9 ms