RNA–Protein interactions for RNA: ENST00000566640.1

SIN3A-207, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2

Gene SIN3A, Length 944 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-207ENST00000566640 ATP10DQ9P241 1426 aa9.54□□□□□ -0.88
SIN3A-207ENST00000566640 TAF1LQ8IZX4 1826 aa9.54□□□□□ -0.88
SIN3A-207ENST00000566640 HSP90AB1P08238 724 aaKnown RBP9.53□□□□□ -0.88
SIN3A-207ENST00000566640 ARHGEF1Q92888 912 aaKnown RBP9.53□□□□□ -0.88
SIN3A-207ENST00000566640 KNSTRNQ9Y448 316 aa9.53□□□□□ -0.88
SIN3A-207ENST00000566640 CNTNAP4Q9C0A0 1308 aa9.53□□□□□ -0.88
SIN3A-207ENST00000566640 MMP10P09238 476 aa9.52□□□□□ -0.89
SIN3A-207ENST00000566640 NBR1Q14596 966 aa9.52□□□□□ -0.89
SIN3A-207ENST00000566640 AMOTQ4VCS5 1084 aa9.52□□□□□ -0.89
SIN3A-207ENST00000566640 PLEKHO1Q53GL0 409 aaPredicted RBP9.52□□□□□ -0.89
SIN3A-207ENST00000566640 RC3H1Q5TC82 1133 aaKnown RBP9.52□□□□□ -0.89
SIN3A-207ENST00000566640 UBR3Q6ZT12 1888 aa9.52□□□□□ -0.89
SIN3A-207ENST00000566640 MORC1Q86VD1 984 aa9.52□□□□□ -0.89
SIN3A-207ENST00000566640 AEBP1Q8IUX7 1158 aa9.52□□□□□ -0.89
SIN3A-207ENST00000566640 EMILIN3Q9NT22 766 aa9.52□□□□□ -0.89
SIN3A-207ENST00000566640 CHD4Q14839 1912 aa9.52□□□□□ -0.89
SIN3A-207ENST00000566640 PXDNLA1KZ92 1463 aa9.52□□□□□ -0.89
SIN3A-207ENST00000566640 ITGB4P16144 1822 aa9.52□□□□□ -0.89
SIN3A-207ENST00000566640 C10orf71Q711Q0 1435 aa9.51□□□□□ -0.89
SIN3A-207ENST00000566640 CC2D1BQ5T0F9 858 aaKnown RBP9.51□□□□□ -0.89
SIN3A-207ENST00000566640 ZNF530Q6P9A1 599 aaPredicted RBP9.51□□□□□ -0.89
SIN3A-207ENST00000566640 RTCBQ9Y3I0 505 aaKnown RBP9.51□□□□□ -0.89
SIN3A-207ENST00000566640 ARIH1Q9Y4X5 557 aaPredicted RBP9.51□□□□□ -0.89
SIN3A-207ENST00000566640 CICQ96RK0 1608 aaPredicted RBP9.5□□□□□ -0.89
SIN3A-207ENST00000566640 RPS6KA4O75676 772 aa9.5□□□□□ -0.89
SIN3A-207ENST00000566640 GYS1P13807 737 aa9.5□□□□□ -0.89
SIN3A-207ENST00000566640 IL13P35225 146 aa9.5□□□□□ -0.89
SIN3A-207ENST00000566640 ZNF831Q5JPB2 1677 aa9.5□□□□□ -0.89
SIN3A-207ENST00000566640 MTHFSP49914 203 aa9.49□□□□□ -0.89
SIN3A-207ENST00000566640 CABP4P57796 275 aa9.49□□□□□ -0.89
SIN3A-207ENST00000566640 TGFB2P61812 414 aa9.49□□□□□ -0.89
SIN3A-207ENST00000566640 TRAPPC3LQ5T215 181 aa9.49□□□□□ -0.89
SIN3A-207ENST00000566640 NLGN1Q8N2Q7 840 aa9.49□□□□□ -0.89
SIN3A-207ENST00000566640 WWC3Q9ULE0 1092 aa9.49□□□□□ -0.89
SIN3A-207ENST00000566640 SULT6B1Q6IMI4 303 aa9.48□□□□□ -0.89
SIN3A-207ENST00000566640 GPBP1L1Q9HC44 474 aaPredicted RBP9.48□□□□□ -0.89
SIN3A-207ENST00000566640 PTCD1O75127 700 aaKnown RBP9.47□□□□□ -0.89
SIN3A-207ENST00000566640 CRKLP46109 303 aaKnown RBP9.47□□□□□ -0.89
SIN3A-207ENST00000566640 C1orf141Q5JVX7 400 aa9.47□□□□□ -0.89
SIN3A-207ENST00000566640 NFATC2IPQ8NCF5 419 aa9.47□□□□□ -0.89
SIN3A-207ENST00000566640 KIAA1551Q9HCM1 1747 aa9.46□□□□□ -0.89
SIN3A-207ENST00000566640 A0A0G2JLW4 131 aa9.46□□□□□ -0.9
SIN3A-207ENST00000566640 KCNA3P22001 575 aa9.46□□□□□ -0.9
SIN3A-207ENST00000566640 RFC4P35249 363 aa9.46□□□□□ -0.9
SIN3A-207ENST00000566640 INTS5Q6P9B9 1019 aaKnown RBP9.46□□□□□ -0.9
SIN3A-207ENST00000566640 USP42Q9H9J4 1324 aaKnown RBP9.46□□□□□ -0.9
SIN3A-207ENST00000566640 MRC1P22897 1456 aa9.46□□□□□ -0.9
SIN3A-207ENST00000566640 COL5A3P25940 1745 aaPredicted RBP9.45□□□□□ -0.9
SIN3A-207ENST00000566640 VIRMAQ69YN4 1812 aaKnown RBP9.45□□□□□ -0.9
SIN3A-207ENST00000566640 PER1O15534 1290 aaPredicted RBP9.45□□□□□ -0.9
SIN3A-207ENST00000566640 DPEP1P16444 411 aa9.45□□□□□ -0.9
SIN3A-207ENST00000566640 DDR1Q08345 913 aa9.45□□□□□ -0.9
SIN3A-207ENST00000566640 AKAP4Q5JQC9 854 aa9.45□□□□□ -0.9
SIN3A-207ENST00000566640 ZNF526Q8TF50 670 aaPredicted RBP9.45□□□□□ -0.9
SIN3A-207ENST00000566640 SLC52A2Q9HAB3 445 aa9.45□□□□□ -0.9
SIN3A-207ENST00000566640 CCDC87Q9NVE4 849 aa9.45□□□□□ -0.9
SIN3A-207ENST00000566640 SRP68Q9UHB9 627 aaKnown RBP9.45□□□□□ -0.9
SIN3A-207ENST00000566640 BCS1LQ9Y276 419 aa9.45□□□□□ -0.9
SIN3A-207ENST00000566640 SEMA3EO15041 775 aa9.44□□□□□ -0.9
SIN3A-207ENST00000566640 HSPA6P17066 643 aa9.44□□□□□ -0.9
SIN3A-207ENST00000566640 LGR6Q9HBX8 967 aa9.44□□□□□ -0.9
SIN3A-207ENST00000566640 PARP3Q9Y6F1 533 aa9.44□□□□□ -0.9
SIN3A-207ENST00000566640 COL3A1P02461 1466 aaPredicted RBP9.44□□□□□ -0.9
SIN3A-207ENST00000566640 C4AP0C0L4 1744 aa9.44□□□□□ -0.9
SIN3A-207ENST00000566640 KIF13BQ9NQT8 1826 aa9.44□□□□□ -0.9
SIN3A-207ENST00000566640 SOS1Q07889 1333 aaPredicted RBP9.43□□□□□ -0.9
SIN3A-207ENST00000566640 POLRMTO00411 1230 aaKnown RBP9.43□□□□□ -0.9
SIN3A-207ENST00000566640 DPYSL4O14531 572 aa9.43□□□□□ -0.9
SIN3A-207ENST00000566640 RNMTO43148 476 aaKnown RBP9.43□□□□□ -0.9
SIN3A-207ENST00000566640 CYP19A1P11511 503 aaPredicted RBP9.43□□□□□ -0.9
SIN3A-207ENST00000566640 TM4SF1P30408 202 aa9.43□□□□□ -0.9
SIN3A-207ENST00000566640 DNAJC10Q8IXB1 793 aa9.43□□□□□ -0.9
SIN3A-207ENST00000566640 ADAMTS7Q9UKP4 1686 aa9.42□□□□□ -0.9
SIN3A-207ENST00000566640 KCPQ6ZWJ8 1503 aa9.42□□□□□ -0.9
SIN3A-207ENST00000566640 FCHSD2O94868 740 aa9.42□□□□□ -0.9
SIN3A-207ENST00000566640 SLC34A2O95436 690 aa9.42□□□□□ -0.9
SIN3A-207ENST00000566640 HMOX1P09601 288 aa9.42□□□□□ -0.9
SIN3A-207ENST00000566640 MTHFSDQ2M296 383 aaKnown RBP9.42□□□□□ -0.9
SIN3A-207ENST00000566640 ERICH6Q7L0X2 663 aa9.42□□□□□ -0.9
SIN3A-207ENST00000566640 OXER1Q8TDS5 423 aa9.42□□□□□ -0.9
SIN3A-207ENST00000566640 TJP1Q07157 1748 aa9.42□□□□□ -0.9
SIN3A-207ENST00000566640 NPC1L1Q9UHC9 1359 aa9.41□□□□□ -0.9
SIN3A-207ENST00000566640 SLC39A6Q13433 755 aa9.41□□□□□ -0.9
SIN3A-207ENST00000566640 DOK7Q18PE1 504 aa9.41□□□□□ -0.9
SIN3A-207ENST00000566640 ARHGAP27Q6ZUM4 889 aa9.41□□□□□ -0.9
SIN3A-207ENST00000566640 TESPA1A2RU30 521 aaPredicted RBP9.4□□□□□ -0.9
SIN3A-207ENST00000566640 DIAPH1O60610 1272 aaKnown RBP9.4□□□□□ -0.9
SIN3A-207ENST00000566640 HOXB3P14651 431 aaPredicted RBP9.4□□□□□ -0.9
SIN3A-207ENST00000566640 MAP3K9P80192 1104 aa9.4□□□□□ -0.9
SIN3A-207ENST00000566640 USPL1Q5W0Q7 1092 aa9.4□□□□□ -0.9
SIN3A-207ENST00000566640 PTCD2Q8WV60 388 aaKnown RBP9.4□□□□□ -0.9
SIN3A-207ENST00000566640 BCL2L12Q9HB09 334 aa9.4□□□□□ -0.9
SIN3A-207ENST00000566640 PIM2Q9P1W9 311 aa9.4□□□□□ -0.9
SIN3A-207ENST00000566640 ZBTB1Q9Y2K1 713 aa9.4□□□□□ -0.9
SIN3A-207ENST00000566640 MYH14Q7Z406 1995 aaKnown RBP9.4□□□□□ -0.9
SIN3A-207ENST00000566640 SCN11AQ9UI33 1791 aa9.4□□□□□ -0.91
SIN3A-207ENST00000566640 COL15A1P39059 1388 aa9.39□□□□□ -0.91
SIN3A-207ENST00000566640 U2SURPO15042 1029 aaKnown RBP9.39□□□□□ -0.91
SIN3A-207ENST00000566640 TOMM70O94826 608 aa9.39□□□□□ -0.91
SIN3A-207ENST00000566640 CHRNA5P30532 468 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms