RNA–Protein interactions for RNA: ENST00000566581.5

LPCAT4-206, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 1 (best)

Gene LPCAT4, Length 915 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-206ENST00000566581 PDE6BP35913 854 aa16.52■□□□□ 0.24
LPCAT4-206ENST00000566581 CFAP44Q96MT7 982 aa16.52■□□□□ 0.24
LPCAT4-206ENST00000566581 CCDC88AQ3V6T2 1871 aa16.52■□□□□ 0.23
LPCAT4-206ENST00000566581 ADCY9O60503 1353 aa16.51■□□□□ 0.23
LPCAT4-206ENST00000566581 CNBD1Q8NA66 436 aa16.51■□□□□ 0.23
LPCAT4-206ENST00000566581 MAP3K15Q6ZN16 1313 aa16.5■□□□□ 0.23
LPCAT4-206ENST00000566581 CALD1Q05682 793 aaKnown RBP16.5■□□□□ 0.23
LPCAT4-206ENST00000566581 PDIA6Q15084 440 aa16.5■□□□□ 0.23
LPCAT4-206ENST00000566581 HLFQ16534 295 aa16.5■□□□□ 0.23
LPCAT4-206ENST00000566581 ARHGAP27Q6ZUM4 889 aa16.5■□□□□ 0.23
LPCAT4-206ENST00000566581 LRP10Q7Z4F1 713 aa16.5■□□□□ 0.23
LPCAT4-206ENST00000566581 C2CD5Q86YS7 1000 aa16.5■□□□□ 0.23
LPCAT4-206ENST00000566581 NIP7Q9Y221 180 aaKnown RBP eCLIP16.5■□□□□ 0.23
LPCAT4-206ENST00000566581 HOXB7P09629 217 aa16.49■□□□□ 0.23
LPCAT4-206ENST00000566581 ZNF853P0CG23 659 aa16.49■□□□□ 0.23
LPCAT4-206ENST00000566581 MYL6BP14649 208 aa16.49■□□□□ 0.23
LPCAT4-206ENST00000566581 EIF2S2P20042 333 aaKnown RBP16.49■□□□□ 0.23
LPCAT4-206ENST00000566581 ST5P78524 1137 aa16.49■□□□□ 0.23
LPCAT4-206ENST00000566581 TPTE2Q6XPS3 522 aa16.49■□□□□ 0.23
LPCAT4-206ENST00000566581 KIF6Q6ZMV9 814 aa16.49■□□□□ 0.23
LPCAT4-206ENST00000566581 NBPF5PQ86XG9 351 aaPredicted RBP16.49■□□□□ 0.23
LPCAT4-206ENST00000566581 NGEFQ8N5V2 710 aa16.49■□□□□ 0.23
LPCAT4-206ENST00000566581 TTLL6Q8N841 843 aa16.49■□□□□ 0.23
LPCAT4-206ENST00000566581 LAS1LQ9Y4W2 734 aaKnown RBP16.49■□□□□ 0.23
LPCAT4-206ENST00000566581 COL11A2P13942 1736 aaPredicted RBP16.48■□□□□ 0.23
LPCAT4-206ENST00000566581 TTLL7Q6ZT98 887 aa16.48■□□□□ 0.23
LPCAT4-206ENST00000566581 CACNA1SQ13698 1873 aa16.48■□□□□ 0.23
LPCAT4-206ENST00000566581 ATP10DQ9P241 1426 aa16.47■□□□□ 0.23
LPCAT4-206ENST00000566581 ARFGEF2Q9Y6D5 1785 aa16.47■□□□□ 0.23
LPCAT4-206ENST00000566581 NPHP1O15259 732 aa16.47■□□□□ 0.23
LPCAT4-206ENST00000566581 NCBP3Q53F19 620 aaKnown RBP16.47■□□□□ 0.23
LPCAT4-206ENST00000566581 IFT57Q9NWB7 429 aa16.47■□□□□ 0.23
LPCAT4-206ENST00000566581 SLX4Q8IY92 1834 aa16.47■□□□□ 0.23
LPCAT4-206ENST00000566581 FER1L6Q2WGJ9 1857 aa16.46■□□□□ 0.23
LPCAT4-206ENST00000566581 KLRG2A4D1S0 409 aaPredicted RBP16.46■□□□□ 0.23
LPCAT4-206ENST00000566581 SRGNP10124 158 aa16.46■□□□□ 0.23
LPCAT4-206ENST00000566581 GNAI1P63096 354 aa16.46■□□□□ 0.23
LPCAT4-206ENST00000566581 GIGYF2Q6Y7W6 1299 aaKnown RBP16.46■□□□□ 0.23
LPCAT4-206ENST00000566581 CCDC24Q8N4L8 307 aa16.46■□□□□ 0.23
LPCAT4-206ENST00000566581 MRS2Q9HD23 443 aa16.46■□□□□ 0.23
LPCAT4-206ENST00000566581 DDX21Q9NR30 783 aaKnown RBP eCLIP16.46■□□□□ 0.23
LPCAT4-206ENST00000566581 MBIPQ9NS73 344 aa16.46■□□□□ 0.23
LPCAT4-206ENST00000566581 CCDC27Q2M243 656 aa16.45■□□□□ 0.22
LPCAT4-206ENST00000566581 KRT24Q2M2I5 525 aa16.45■□□□□ 0.22
LPCAT4-206ENST00000566581 PROSER3Q2NL68 480 aa16.45■□□□□ 0.22
LPCAT4-206ENST00000566581 STYK1Q6J9G0 422 aa16.45■□□□□ 0.22
LPCAT4-206ENST00000566581 NYXQ9GZU5 481 aa16.45■□□□□ 0.22
LPCAT4-206ENST00000566581 ANKRD36CQ5JPF3 1778 aa16.45■□□□□ 0.22
LPCAT4-206ENST00000566581 DICER1Q9UPY3 1922 aaKnown RBP16.45■□□□□ 0.22
LPCAT4-206ENST00000566581 ZNF34Q8IZ26 560 aa16.44■□□□□ 0.22
LPCAT4-206ENST00000566581 CNKSR1Q969H4 720 aa16.44■□□□□ 0.22
LPCAT4-206ENST00000566581 ZNF622Q969S3 477 aaKnown RBP eCLIP16.44■□□□□ 0.22
LPCAT4-206ENST00000566581 MASTLQ96GX5 879 aa16.44■□□□□ 0.22
LPCAT4-206ENST00000566581 ZBTB3Q9H5J0 574 aa16.44■□□□□ 0.22
LPCAT4-206ENST00000566581 IBTKQ9P2D0 1353 aaPredicted RBP16.43■□□□□ 0.22
LPCAT4-206ENST00000566581 DUSP27Q5VZP5 1158 aa16.43■□□□□ 0.22
LPCAT4-206ENST00000566581 CACNA1FO60840 1977 aa16.43■□□□□ 0.22
LPCAT4-206ENST00000566581 ANXA1P04083 346 aa16.42■□□□□ 0.22
LPCAT4-206ENST00000566581 HDGFL1Q5TGJ6 251 aa16.42■□□□□ 0.22
LPCAT4-206ENST00000566581 C9orf131Q5VYM1 1079 aa16.42■□□□□ 0.22
LPCAT4-206ENST00000566581 COPS6Q7L5N1 327 aa16.42■□□□□ 0.22
LPCAT4-206ENST00000566581 NECTIN2Q92692 538 aa16.42■□□□□ 0.22
LPCAT4-206ENST00000566581 GPBP1L1Q9HC44 474 aaPredicted RBP16.42■□□□□ 0.22
LPCAT4-206ENST00000566581 DBF4Q9UBU7 674 aaPredicted RBP16.42■□□□□ 0.22
LPCAT4-206ENST00000566581 NPR1P16066 1061 aa16.41■□□□□ 0.22
LPCAT4-206ENST00000566581 GTF2E1P29083 439 aaPredicted RBP16.41■□□□□ 0.22
LPCAT4-206ENST00000566581 PARP10Q53GL7 1025 aa16.41■□□□□ 0.22
LPCAT4-206ENST00000566581 XAGE3Q8WTP9 111 aa16.41■□□□□ 0.22
LPCAT4-206ENST00000566581 CHPF2Q9P2E5 772 aa16.41■□□□□ 0.22
LPCAT4-206ENST00000566581 RIC1Q4ADV7 1423 aa16.41■□□□□ 0.22
LPCAT4-206ENST00000566581 UBN2Q6ZU65 1347 aa16.41■□□□□ 0.22
LPCAT4-206ENST00000566581 FAM177BA6PVY3 158 aa16.4■□□□□ 0.22
LPCAT4-206ENST00000566581 GPTP24298 496 aa16.4■□□□□ 0.22
LPCAT4-206ENST00000566581 HSP90AB3PQ58FF7 597 aa16.4■□□□□ 0.22
LPCAT4-206ENST00000566581 WWC1Q8IX03 1113 aa16.4■□□□□ 0.22
LPCAT4-206ENST00000566581 CHMP4AQ9BY43 222 aa16.4■□□□□ 0.22
LPCAT4-206ENST00000566581 HYPKQ9NX55 129 aa16.4■□□□□ 0.22
LPCAT4-206ENST00000566581 LMNB1P20700 586 aa16.39■□□□□ 0.21
LPCAT4-206ENST00000566581 AIMP1Q12904 312 aaKnown RBP16.39■□□□□ 0.21
LPCAT4-206ENST00000566581 CRY2Q49AN0 593 aa16.39■□□□□ 0.21
LPCAT4-206ENST00000566581 SUSD4Q5VX71 490 aa16.39■□□□□ 0.21
LPCAT4-206ENST00000566581 PRPF40BQ6NWY9 871 aaKnown RBP16.39■□□□□ 0.21
LPCAT4-206ENST00000566581 PPP1R42Q7Z4L9 355 aa16.39■□□□□ 0.21
LPCAT4-206ENST00000566581 IL16Q14005 1332 aa16.39■□□□□ 0.21
LPCAT4-206ENST00000566581 C21orf2O43822 256 aa16.38■□□□□ 0.21
LPCAT4-206ENST00000566581 NTSR2O95665 410 aa16.38■□□□□ 0.21
LPCAT4-206ENST00000566581 ALDH1B1P30837 517 aa16.38■□□□□ 0.21
LPCAT4-206ENST00000566581 C1QTNF8P60827 252 aa16.38■□□□□ 0.21
LPCAT4-206ENST00000566581 TCIRG1Q13488 830 aa16.38■□□□□ 0.21
LPCAT4-206ENST00000566581 ERFEQ4G0M1 354 aa16.38■□□□□ 0.21
LPCAT4-206ENST00000566581 SOGA3Q5TF21 947 aa16.38■□□□□ 0.21
LPCAT4-206ENST00000566581 NUTM1Q86Y26 1132 aa16.38■□□□□ 0.21
LPCAT4-206ENST00000566581 C7orf43Q8WVR3 580 aa16.38■□□□□ 0.21
LPCAT4-206ENST00000566581 RNF181Q9P0P0 153 aa16.38■□□□□ 0.21
LPCAT4-206ENST00000566581 RNF123Q5XPI4 1314 aa16.38■□□□□ 0.21
LPCAT4-206ENST00000566581 ZC3H4Q9UPT8 1303 aaKnown RBP16.38■□□□□ 0.21
LPCAT4-206ENST00000566581 TNRC6CQ9HCJ0 1690 aaKnown RBP16.37■□□□□ 0.21
LPCAT4-206ENST00000566581 NFKBIEO00221 500 aa16.37■□□□□ 0.21
LPCAT4-206ENST00000566581 RASSF7Q02833 373 aa16.37■□□□□ 0.21
LPCAT4-206ENST00000566581 ANKRD13DQ6ZTN6 518 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms