RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 PPP4CP60510 307 aa13.51□□□□□ -0.25
UBFD1-205ENST00000566136 USP17L24Q0WX57 530 aa13.51□□□□□ -0.25
UBFD1-205ENST00000566136 USP17L2Q6R6M4 530 aa13.51□□□□□ -0.25
UBFD1-205ENST00000566136 USP17L1Q7RTZ2 530 aa13.51□□□□□ -0.25
UBFD1-205ENST00000566136 CPS1P31327 1500 aa13.5□□□□□ -0.25
UBFD1-205ENST00000566136 IDI1Q13907 227 aa13.5□□□□□ -0.25
UBFD1-205ENST00000566136 SYCP2LQ5T4T6 812 aa13.5□□□□□ -0.25
UBFD1-205ENST00000566136 RINLQ6ZS11 566 aa13.5□□□□□ -0.25
UBFD1-205ENST00000566136 PIK3C2BO00750 1634 aa13.5□□□□□ -0.25
UBFD1-205ENST00000566136 SCAF11Q99590 1463 aaKnown RBP13.5□□□□□ -0.25
UBFD1-205ENST00000566136 DSG3P32926 999 aa13.5□□□□□ -0.25
UBFD1-205ENST00000566136 ELOAQ14241 798 aaKnown RBP13.5□□□□□ -0.25
UBFD1-205ENST00000566136 NBPF1Q3BBV0 1214 aa13.5□□□□□ -0.25
UBFD1-205ENST00000566136 FBXO9Q9UK97 447 aaPredicted RBP13.5□□□□□ -0.25
UBFD1-205ENST00000566136 PRAG1Q86YV5 1406 aa13.5□□□□□ -0.25
UBFD1-205ENST00000566136 GLYCTKQ8IVS8 523 aa13.49□□□□□ -0.25
UBFD1-205ENST00000566136 SFMBT1Q9UHJ3 866 aa13.49□□□□□ -0.25
UBFD1-205ENST00000566136 ARHGAP23Q9P227 1491 aa13.49□□□□□ -0.25
UBFD1-205ENST00000566136 GIGYF1O75420 1035 aaPredicted RBP13.49□□□□□ -0.25
UBFD1-205ENST00000566136 RBL2Q08999 1139 aa13.49□□□□□ -0.25
UBFD1-205ENST00000566136 SEMA3FQ13275 785 aa13.49□□□□□ -0.25
UBFD1-205ENST00000566136 MCF2L2Q86YR7 1114 aa13.49□□□□□ -0.25
UBFD1-205ENST00000566136 FAM126AQ9BYI3 521 aaPredicted RBP13.49□□□□□ -0.25
UBFD1-205ENST00000566136 EFCAB6Q5THR3 1501 aa13.49□□□□□ -0.25
UBFD1-205ENST00000566136 SYNMO15061 1565 aa13.48□□□□□ -0.25
UBFD1-205ENST00000566136 HSD3B2P26439 372 aa13.48□□□□□ -0.25
UBFD1-205ENST00000566136 PIP4K2BP78356 416 aa13.48□□□□□ -0.25
UBFD1-205ENST00000566136 ARHGAP4P98171 946 aa13.48□□□□□ -0.25
UBFD1-205ENST00000566136 ZNF512BQ96KM6 892 aaPredicted RBP13.48□□□□□ -0.25
UBFD1-205ENST00000566136 SLIT1O75093 1534 aa13.48□□□□□ -0.25
UBFD1-205ENST00000566136 PRC1O43663 620 aa13.48□□□□□ -0.25
UBFD1-205ENST00000566136 PDGFRBP09619 1106 aa13.48□□□□□ -0.25
UBFD1-205ENST00000566136 MYBPC2Q14324 1141 aa13.48□□□□□ -0.25
UBFD1-205ENST00000566136 SEPT3Q9UH03 358 aa13.48□□□□□ -0.25
UBFD1-205ENST00000566136 TRPM1Q7Z4N2 1603 aa13.48□□□□□ -0.25
UBFD1-205ENST00000566136 DISP3Q9P2K9 1392 aa13.48□□□□□ -0.25
UBFD1-205ENST00000566136 MKNK1Q9BUB5 465 aa13.47□□□□□ -0.25
UBFD1-205ENST00000566136 EID1Q9Y6B2 187 aa13.47□□□□□ -0.25
UBFD1-205ENST00000566136 STRCP1A6NGW2 1772 aa13.47□□□□□ -0.25
UBFD1-205ENST00000566136 ERBB3P21860 1342 aa13.47□□□□□ -0.25
UBFD1-205ENST00000566136 NOS1P29475 1434 aa13.47□□□□□ -0.25
UBFD1-205ENST00000566136 SENP3-EIF4A1A0A087X0R7 540 aa13.47□□□□□ -0.25
UBFD1-205ENST00000566136 RACK1P63244 317 aaKnown RBP13.47□□□□□ -0.25
UBFD1-205ENST00000566136 TCEAL9Q9UHQ7 104 aa13.47□□□□□ -0.25
UBFD1-205ENST00000566136 TMEM2Q9UHN6 1383 aa13.47□□□□□ -0.25
UBFD1-205ENST00000566136 KCNH2Q12809 1159 aa13.46□□□□□ -0.25
UBFD1-205ENST00000566136 PDE3BQ13370 1112 aa13.46□□□□□ -0.25
UBFD1-205ENST00000566136 ZNF594Q96JF6 807 aaPredicted RBP13.46□□□□□ -0.25
UBFD1-205ENST00000566136 TOM1O60784 492 aa13.46□□□□□ -0.26
UBFD1-205ENST00000566136 PRR29P0C7W0 189 aa13.46□□□□□ -0.26
UBFD1-205ENST00000566136 TGIF2Q9GZN2 237 aa13.46□□□□□ -0.26
UBFD1-205ENST00000566136 COMMD10Q9Y6G5 202 aa13.45□□□□□ -0.26
UBFD1-205ENST00000566136 LDHAP00338 332 aaKnown RBP13.45□□□□□ -0.26
UBFD1-205ENST00000566136 LRRC41Q15345 812 aa13.45□□□□□ -0.26
UBFD1-205ENST00000566136 FAM174AQ8TBP5 190 aa13.45□□□□□ -0.26
UBFD1-205ENST00000566136 PRIMPOLQ96LW4 560 aa13.45□□□□□ -0.26
UBFD1-205ENST00000566136 ZBED9Q6R2W3 1325 aa13.44□□□□□ -0.26
UBFD1-205ENST00000566136 PLPP6Q8IY26 295 aa13.44□□□□□ -0.26
UBFD1-205ENST00000566136 ZNF579Q8NAF0 562 aaKnown RBP13.44□□□□□ -0.26
UBFD1-205ENST00000566136 ZCRB1Q8TBF4 217 aaKnown RBP13.44□□□□□ -0.26
UBFD1-205ENST00000566136 LRRC7Q96NW7 1537 aa13.44□□□□□ -0.26
UBFD1-205ENST00000566136 PTK7Q13308 1070 aa13.44□□□□□ -0.26
UBFD1-205ENST00000566136 DHX8Q14562 1220 aaKnown RBP13.43□□□□□ -0.26
UBFD1-205ENST00000566136 TTC39BQ5VTQ0 682 aaPredicted RBP13.43□□□□□ -0.26
UBFD1-205ENST00000566136 CREBRFQ8IUR6 639 aa13.43□□□□□ -0.26
UBFD1-205ENST00000566136 RBM33Q96EV2 1170 aaKnown RBP13.43□□□□□ -0.26
UBFD1-205ENST00000566136 PARP2Q9UGN5 583 aa13.43□□□□□ -0.26
UBFD1-205ENST00000566136 DNAJC6O75061 913 aa13.42□□□□□ -0.26
UBFD1-205ENST00000566136 STK10O94804 968 aaKnown RBP13.42□□□□□ -0.26
UBFD1-205ENST00000566136 HSPA1LP34931 641 aa13.42□□□□□ -0.26
UBFD1-205ENST00000566136 HLA-CQ95604 372 aa13.42□□□□□ -0.26
UBFD1-205ENST00000566136 TET3O43151 1660 aa13.42□□□□□ -0.26
UBFD1-205ENST00000566136 CFAP69A5D8W1 941 aa13.42□□□□□ -0.26
UBFD1-205ENST00000566136 CCDC85CA6NKD9 419 aa13.42□□□□□ -0.26
UBFD1-205ENST00000566136 C10orf62Q5T681 223 aaPredicted RBP13.42□□□□□ -0.26
UBFD1-205ENST00000566136 USP48Q86UV5 1035 aa13.42□□□□□ -0.26
UBFD1-205ENST00000566136 CLP1Q92989 425 aaKnown RBP13.42□□□□□ -0.26
UBFD1-205ENST00000566136 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.42□□□□□ -0.26
UBFD1-205ENST00000566136 ADGRB3O60242 1522 aa13.42□□□□□ -0.26
UBFD1-205ENST00000566136 SPTLC1O15269 473 aa13.41□□□□□ -0.26
UBFD1-205ENST00000566136 ILDR2Q71H61 639 aa13.41□□□□□ -0.26
UBFD1-205ENST00000566136 DCTN4Q9UJW0 460 aa13.41□□□□□ -0.26
UBFD1-205ENST00000566136 ALKQ9UM73 1620 aa13.41□□□□□ -0.26
UBFD1-205ENST00000566136 KDM5AP29375 1690 aaKnown RBP13.41□□□□□ -0.26
UBFD1-205ENST00000566136 GET4Q7L5D6 327 aaPredicted RBP13.41□□□□□ -0.26
UBFD1-205ENST00000566136 RNF34Q969K3 372 aa13.41□□□□□ -0.26
UBFD1-205ENST00000566136 RNPC3Q96LT9 517 aaKnown RBP13.41□□□□□ -0.26
UBFD1-205ENST00000566136 SLC26A8Q96RN1 970 aa13.41□□□□□ -0.26
UBFD1-205ENST00000566136 ARPC5LQ9BPX5 153 aa13.41□□□□□ -0.26
UBFD1-205ENST00000566136 INPP5FQ9Y2H2 1132 aa13.41□□□□□ -0.26
UBFD1-205ENST00000566136 K7ELQ4 463 aaPredicted RBP13.4□□□□□ -0.26
UBFD1-205ENST00000566136 CCAR1Q8IX12 1150 aaKnown RBP13.4□□□□□ -0.26
UBFD1-205ENST00000566136 GMLQ99445 158 aa13.4□□□□□ -0.26
UBFD1-205ENST00000566136 E9PCH4 1651 aa13.4□□□□□ -0.26
UBFD1-205ENST00000566136 GPRASP1Q5JY77 1395 aa13.4□□□□□ -0.26
UBFD1-205ENST00000566136 PGBD3Q8N328 593 aa13.4□□□□□ -0.26
UBFD1-205ENST00000566136 TMC1Q8TDI8 760 aa13.4□□□□□ -0.26
UBFD1-205ENST00000566136 USP17L5A8MUK1 530 aa13.39□□□□□ -0.27
UBFD1-205ENST00000566136 RASA1P20936 1047 aa13.39□□□□□ -0.27
UBFD1-205ENST00000566136 AMOTL1Q8IY63 956 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms