RNA–Protein interactions for RNA: ENST00000565666.5

CMTM3-210, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-210ENST00000565666 DUSP27Q5VZP5 1158 aa24.28■■□□□ 1.48
CMTM3-210ENST00000565666 RGL2O15211 777 aa24.27■■□□□ 1.48
CMTM3-210ENST00000565666 HDGFL1Q5TGJ6 251 aa24.27■■□□□ 1.48
CMTM3-210ENST00000565666 TTLL7Q6ZT98 887 aa24.27■■□□□ 1.48
CMTM3-210ENST00000565666 MAP3K15Q6ZN16 1313 aa24.27■■□□□ 1.48
CMTM3-210ENST00000565666 ANXA1P04083 346 aa24.26■■□□□ 1.47
CMTM3-210ENST00000565666 PDIA6Q15084 440 aa24.26■■□□□ 1.47
CMTM3-210ENST00000565666 HLFQ16534 295 aa24.26■■□□□ 1.47
CMTM3-210ENST00000565666 NUP98P52948 1817 aa24.26■■□□□ 1.47
CMTM3-210ENST00000565666 ERVV-1B6SEH8 477 aa24.25■■□□□ 1.47
CMTM3-210ENST00000565666 YY1P25490 414 aa24.25■■□□□ 1.47
CMTM3-210ENST00000565666 PROSER3Q2NL68 480 aa24.25■■□□□ 1.47
CMTM3-210ENST00000565666 CNBD1Q8NA66 436 aa24.25■■□□□ 1.47
CMTM3-210ENST00000565666 ZBTB3Q9H5J0 574 aa24.25■■□□□ 1.47
CMTM3-210ENST00000565666 NIP7Q9Y221 180 aaKnown RBP eCLIP24.25■■□□□ 1.47
CMTM3-210ENST00000565666 CHD4Q14839 1912 aa24.25■■□□□ 1.47
CMTM3-210ENST00000565666 CHRNA5P30532 468 aa24.24■■□□□ 1.47
CMTM3-210ENST00000565666 DDX21Q9NR30 783 aaKnown RBP eCLIP24.24■■□□□ 1.47
CMTM3-210ENST00000565666 BCS1LQ9Y276 419 aa24.24■■□□□ 1.47
CMTM3-210ENST00000565666 BRCA1P38398 1863 aaKnown RBP24.24■■□□□ 1.47
CMTM3-210ENST00000565666 ELL2O00472 640 aaPredicted RBP24.23■■□□□ 1.47
CMTM3-210ENST00000565666 PRR5LQ6MZQ0 368 aa24.23■■□□□ 1.47
CMTM3-210ENST00000565666 NBPF5PQ86XG9 351 aaPredicted RBP24.23■■□□□ 1.47
CMTM3-210ENST00000565666 TSR2Q969E8 191 aaKnown RBP24.23■■□□□ 1.47
CMTM3-210ENST00000565666 CHPF2Q9P2E5 772 aa24.23■■□□□ 1.47
CMTM3-210ENST00000565666 IL16Q14005 1332 aa24.23■■□□□ 1.47
CMTM3-210ENST00000565666 CCER2I3L3R5 266 aa24.22■■□□□ 1.47
CMTM3-210ENST00000565666 ST5P78524 1137 aa24.22■■□□□ 1.47
CMTM3-210ENST00000565666 AIMP1Q12904 312 aaKnown RBP24.22■■□□□ 1.47
CMTM3-210ENST00000565666 LRP10Q7Z4F1 713 aa24.22■■□□□ 1.47
CMTM3-210ENST00000565666 CCDC24Q8N4L8 307 aa24.22■■□□□ 1.47
CMTM3-210ENST00000565666 PIM2Q9P1W9 311 aa24.22■■□□□ 1.47
CMTM3-210ENST00000565666 FAM177BA6PVY3 158 aa24.21■■□□□ 1.47
CMTM3-210ENST00000565666 KCNA3P22001 575 aa24.21■■□□□ 1.47
CMTM3-210ENST00000565666 COPS6Q7L5N1 327 aa24.21■■□□□ 1.47
CMTM3-210ENST00000565666 C8orf58Q8NAV2 365 aa24.21■■□□□ 1.47
CMTM3-210ENST00000565666 DBF4Q9UBU7 674 aaPredicted RBP24.21■■□□□ 1.47
CMTM3-210ENST00000565666 ANKRD31Q8N7Z5 1873 aa24.21■■□□□ 1.47
CMTM3-210ENST00000565666 DIEXFQ68CQ4 756 aaKnown RBP24.2■■□□□ 1.46
CMTM3-210ENST00000565666 WDR63Q8IWG1 891 aa24.2■■□□□ 1.46
CMTM3-210ENST00000565666 XAGE3Q8WTP9 111 aa24.2■■□□□ 1.46
CMTM3-210ENST00000565666 ATP10DQ9P241 1426 aa24.19■■□□□ 1.46
CMTM3-210ENST00000565666 DLEC1Q9Y238 1755 aa24.19■■□□□ 1.46
CMTM3-210ENST00000565666 H0YIN7 160 aa24.19■■□□□ 1.46
CMTM3-210ENST00000565666 PDE6BP35913 854 aa24.19■■□□□ 1.46
CMTM3-210ENST00000565666 GIGYF2Q6Y7W6 1299 aaKnown RBP24.19■■□□□ 1.46
CMTM3-210ENST00000565666 C2CD5Q86YS7 1000 aa24.19■■□□□ 1.46
CMTM3-210ENST00000565666 BRIP1Q9BX63 1249 aa24.19■■□□□ 1.46
CMTM3-210ENST00000565666 GPTP24298 496 aa24.18■■□□□ 1.46
CMTM3-210ENST00000565666 TPTE2Q6XPS3 522 aa24.18■■□□□ 1.46
CMTM3-210ENST00000565666 GTF2E1P29083 439 aaPredicted RBP24.17■■□□□ 1.46
CMTM3-210ENST00000565666 DALRD3Q5D0E6 543 aaKnown RBP24.17■■□□□ 1.46
CMTM3-210ENST00000565666 CHMP4AQ9BY43 222 aa24.17■■□□□ 1.46
CMTM3-210ENST00000565666 HYPKQ9NX55 129 aa24.17■■□□□ 1.46
CMTM3-210ENST00000565666 ARFGEF1Q9Y6D6 1849 aa24.17■■□□□ 1.46
CMTM3-210ENST00000565666 PDZRN3Q9UPQ7 1066 aa24.16■■□□□ 1.46
CMTM3-210ENST00000565666 ANKRD36CQ5JPF3 1778 aa24.16■■□□□ 1.46
CMTM3-210ENST00000565666 TSPYL6Q8N831 410 aa24.15■■□□□ 1.46
CMTM3-210ENST00000565666 NYXQ9GZU5 481 aa24.15■■□□□ 1.46
CMTM3-210ENST00000565666 FANCIQ9NVI1 1328 aa24.14■■□□□ 1.46
CMTM3-210ENST00000565666 COL11A2P13942 1736 aaPredicted RBP24.14■■□□□ 1.45
CMTM3-210ENST00000565666 CCDC30Q5VVM6 783 aa24.14■■□□□ 1.45
CMTM3-210ENST00000565666 ZNF34Q8IZ26 560 aa24.14■■□□□ 1.45
CMTM3-210ENST00000565666 UBN2Q6ZU65 1347 aa24.13■■□□□ 1.45
CMTM3-210ENST00000565666 TWISTNBQ3B726 338 aaPredicted RBP24.13■■□□□ 1.45
CMTM3-210ENST00000565666 HSP90AB3PQ58FF7 597 aa24.13■■□□□ 1.45
CMTM3-210ENST00000565666 ZNF622Q969S3 477 aaKnown RBP eCLIP24.13■■□□□ 1.45
CMTM3-210ENST00000565666 ARHGAP27Q6ZUM4 889 aa24.12■■□□□ 1.45
CMTM3-210ENST00000565666 TTLL6Q8N841 843 aa24.12■■□□□ 1.45
CMTM3-210ENST00000565666 GOLGA2Q08379 1002 aa24.11■■□□□ 1.45
CMTM3-210ENST00000565666 PARP10Q53GL7 1025 aa24.11■■□□□ 1.45
CMTM3-210ENST00000565666 SUSD4Q5VX71 490 aa24.11■■□□□ 1.45
CMTM3-210ENST00000565666 ANKRD13DQ6ZTN6 518 aa24.11■■□□□ 1.45
CMTM3-210ENST00000565666 PPP1R42Q7Z4L9 355 aa24.11■■□□□ 1.45
CMTM3-210ENST00000565666 PLBD2Q8NHP8 589 aa24.11■■□□□ 1.45
CMTM3-210ENST00000565666 MYH16Q9H6N6 1097 aa24.11■■□□□ 1.45
CMTM3-210ENST00000565666 IBTKQ9P2D0 1353 aaPredicted RBP24.11■■□□□ 1.45
CMTM3-210ENST00000565666 NUTM1Q86Y26 1132 aa24.1■■□□□ 1.45
CMTM3-210ENST00000565666 STK31Q9BXU1 1019 aa24.1■■□□□ 1.45
CMTM3-210ENST00000565666 ARFGEF2Q9Y6D5 1785 aa24.09■■□□□ 1.45
CMTM3-210ENST00000565666 PHAXQ9H814 394 aaKnown RBP24.09■■□□□ 1.45
CMTM3-210ENST00000565666 CACNA1SQ13698 1873 aa24.09■■□□□ 1.45
CMTM3-210ENST00000565666 TCIRG1Q13488 830 aa24.08■■□□□ 1.45
CMTM3-210ENST00000565666 ERFEQ4G0M1 354 aa24.08■■□□□ 1.45
CMTM3-210ENST00000565666 MIER1Q8N108 512 aa24.08■■□□□ 1.45
CMTM3-210ENST00000565666 SPINK5Q9NQ38 1064 aaPredicted RBP24.08■■□□□ 1.45
CMTM3-210ENST00000565666 ABCC12Q96J65 1359 aa24.07■■□□□ 1.44
CMTM3-210ENST00000565666 TCERG1O14776 1098 aaKnown RBP24.07■■□□□ 1.44
CMTM3-210ENST00000565666 NTSR2O95665 410 aa24.07■■□□□ 1.44
CMTM3-210ENST00000565666 SRGNP10124 158 aa24.07■■□□□ 1.44
CMTM3-210ENST00000565666 EXOSC9Q06265 439 aaKnown RBP24.07■■□□□ 1.44
CMTM3-210ENST00000565666 STYK1Q6J9G0 422 aa24.07■■□□□ 1.44
CMTM3-210ENST00000565666 RIC3Q7Z5B4 369 aa24.07■■□□□ 1.44
CMTM3-210ENST00000565666 MASTLQ96GX5 879 aa24.07■■□□□ 1.44
CMTM3-210ENST00000565666 TNRC6CQ9HCJ0 1690 aaKnown RBP24.07■■□□□ 1.44
CMTM3-210ENST00000565666 CNKSR1Q969H4 720 aa24.06■■□□□ 1.44
CMTM3-210ENST00000565666 UTP14AQ9BVJ6 771 aaKnown RBP24.06■■□□□ 1.44
CMTM3-210ENST00000565666 ZNF521Q96K83 1311 aa24.06■■□□□ 1.44
CMTM3-210ENST00000565666 NLRP10Q86W26 655 aa24.05■■□□□ 1.44
CMTM3-210ENST00000565666 DDX58O95786 925 aaKnown RBP24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms