RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 RGL2O15211 777 aa13.2□□□□□ -0.3
CMTM3-209ENST00000565003 NPHP1O15259 732 aa13.2□□□□□ -0.3
CMTM3-209ENST00000565003 PRELPP51888 382 aa13.2□□□□□ -0.3
CMTM3-209ENST00000565003 ST5P78524 1137 aa13.2□□□□□ -0.3
CMTM3-209ENST00000565003 WDR43Q15061 677 aaKnown RBP eCLIP13.2□□□□□ -0.3
CMTM3-209ENST00000565003 NBPF5PQ86XG9 351 aaPredicted RBP13.2□□□□□ -0.3
CMTM3-209ENST00000565003 NGEFQ8N5V2 710 aa13.2□□□□□ -0.3
CMTM3-209ENST00000565003 ZNF622Q969S3 477 aaKnown RBP eCLIP13.2□□□□□ -0.3
CMTM3-209ENST00000565003 NIP7Q9Y221 180 aaKnown RBP eCLIP13.2□□□□□ -0.3
CMTM3-209ENST00000565003 NFKBIEO00221 500 aa13.19□□□□□ -0.3
CMTM3-209ENST00000565003 MYL6BP14649 208 aa13.19□□□□□ -0.3
CMTM3-209ENST00000565003 LMOD3Q0VAK6 560 aa13.19□□□□□ -0.3
CMTM3-209ENST00000565003 NEUROD2Q15784 382 aa13.19□□□□□ -0.3
CMTM3-209ENST00000565003 NMRK2Q9NPI5 230 aa13.19□□□□□ -0.3
CMTM3-209ENST00000565003 ADAMTS8Q9UP79 889 aa13.19□□□□□ -0.3
CMTM3-209ENST00000565003 PDZRN3Q9UPQ7 1066 aa13.19□□□□□ -0.3
CMTM3-209ENST00000565003 SRGNP10124 158 aa13.18□□□□□ -0.3
CMTM3-209ENST00000565003 TTLL7Q6ZT98 887 aa13.18□□□□□ -0.3
CMTM3-209ENST00000565003 RUNDC1Q96C34 613 aa13.18□□□□□ -0.3
CMTM3-209ENST00000565003 MAP3K15Q6ZN16 1313 aa13.17□□□□□ -0.3
CMTM3-209ENST00000565003 CACNA1SQ13698 1873 aa13.17□□□□□ -0.3
CMTM3-209ENST00000565003 FAM177BA6PVY3 158 aa13.17□□□□□ -0.3
CMTM3-209ENST00000565003 ERVV-1B6SEH8 477 aa13.17□□□□□ -0.3
CMTM3-209ENST00000565003 C21orf2O43822 256 aa13.17□□□□□ -0.3
CMTM3-209ENST00000565003 STYK1Q6J9G0 422 aa13.17□□□□□ -0.3
CMTM3-209ENST00000565003 BABAM1Q9NWV8 329 aa13.17□□□□□ -0.3
CMTM3-209ENST00000565003 ZNF219Q9P2Y4 722 aaPredicted RBP13.17□□□□□ -0.3
CMTM3-209ENST00000565003 TRIM35Q9UPQ4 493 aa13.17□□□□□ -0.3
CMTM3-209ENST00000565003 SLX4Q8IY92 1834 aa13.17□□□□□ -0.3
CMTM3-209ENST00000565003 ARFGEF2Q9Y6D5 1785 aa13.17□□□□□ -0.3
CMTM3-209ENST00000565003 ERBB4Q15303 1308 aa13.16□□□□□ -0.3
CMTM3-209ENST00000565003 NUP98P52948 1817 aa13.16□□□□□ -0.3
CMTM3-209ENST00000565003 TNRC6CQ9HCJ0 1690 aaKnown RBP13.16□□□□□ -0.3
CMTM3-209ENST00000565003 LMNB1P20700 586 aa13.16□□□□□ -0.3
CMTM3-209ENST00000565003 PDIA6Q15084 440 aa13.16□□□□□ -0.3
CMTM3-209ENST00000565003 PRPF40BQ6NWY9 871 aaKnown RBP13.16□□□□□ -0.3
CMTM3-209ENST00000565003 TPTE2Q6XPS3 522 aa13.16□□□□□ -0.3
CMTM3-209ENST00000565003 LRP10Q7Z4F1 713 aa13.16□□□□□ -0.3
CMTM3-209ENST00000565003 MASTLQ96GX5 879 aa13.16□□□□□ -0.3
CMTM3-209ENST00000565003 ZBTB3Q9H5J0 574 aa13.16□□□□□ -0.3
CMTM3-209ENST00000565003 FER1L6Q2WGJ9 1857 aa13.16□□□□□ -0.3
CMTM3-209ENST00000565003 TIAM2Q8IVF5 1701 aa13.16□□□□□ -0.3
CMTM3-209ENST00000565003 KLRG2A4D1S0 409 aaPredicted RBP13.15□□□□□ -0.3
CMTM3-209ENST00000565003 CHL1O00533 1208 aa13.15□□□□□ -0.3
CMTM3-209ENST00000565003 EIF2S2P20042 333 aaKnown RBP13.15□□□□□ -0.3
CMTM3-209ENST00000565003 KRT24Q2M2I5 525 aa13.15□□□□□ -0.3
CMTM3-209ENST00000565003 PROSER3Q2NL68 480 aa13.15□□□□□ -0.3
CMTM3-209ENST00000565003 KIF6Q6ZMV9 814 aa13.15□□□□□ -0.3
CMTM3-209ENST00000565003 CNKSR1Q969H4 720 aa13.15□□□□□ -0.3
CMTM3-209ENST00000565003 ABCC12Q96J65 1359 aa13.15□□□□□ -0.3
CMTM3-209ENST00000565003 UBN2Q6ZU65 1347 aa13.14□□□□□ -0.31
CMTM3-209ENST00000565003 ZC3H4Q9UPT8 1303 aaKnown RBP13.14□□□□□ -0.31
CMTM3-209ENST00000565003 CCDC88AQ3V6T2 1871 aa13.14□□□□□ -0.31
CMTM3-209ENST00000565003 ANXA1P04083 346 aa13.14□□□□□ -0.31
CMTM3-209ENST00000565003 NPR1P16066 1061 aa13.14□□□□□ -0.31
CMTM3-209ENST00000565003 GPTP24298 496 aa13.14□□□□□ -0.31
CMTM3-209ENST00000565003 NUTM1Q86Y26 1132 aa13.14□□□□□ -0.31
CMTM3-209ENST00000565003 LAS1LQ9Y4W2 734 aaKnown RBP13.14□□□□□ -0.31
CMTM3-209ENST00000565003 KDM2BQ8NHM5 1336 aa13.13□□□□□ -0.31
CMTM3-209ENST00000565003 TOMM70O94826 608 aa13.13□□□□□ -0.31
CMTM3-209ENST00000565003 HSPA6P17066 643 aa13.13□□□□□ -0.31
CMTM3-209ENST00000565003 C7orf43Q8WVR3 580 aa13.13□□□□□ -0.31
CMTM3-209ENST00000565003 NECTIN2Q92692 538 aa13.13□□□□□ -0.31
CMTM3-209ENST00000565003 LTBP3Q9NS15 1303 aa13.13□□□□□ -0.31
CMTM3-209ENST00000565003 IBTKQ9P2D0 1353 aaPredicted RBP13.12□□□□□ -0.31
CMTM3-209ENST00000565003 GTF2E1P29083 439 aaPredicted RBP13.12□□□□□ -0.31
CMTM3-209ENST00000565003 ERFEQ4G0M1 354 aa13.12□□□□□ -0.31
CMTM3-209ENST00000565003 SUSD4Q5VX71 490 aa13.12□□□□□ -0.31
CMTM3-209ENST00000565003 GIGYF2Q6Y7W6 1299 aaKnown RBP13.12□□□□□ -0.31
CMTM3-209ENST00000565003 ZNF34Q8IZ26 560 aa13.12□□□□□ -0.31
CMTM3-209ENST00000565003 NYXQ9GZU5 481 aa13.12□□□□□ -0.31
CMTM3-209ENST00000565003 TAOK3Q9H2K8 898 aa13.12□□□□□ -0.31
CMTM3-209ENST00000565003 APAF1O14727 1248 aa13.11□□□□□ -0.31
CMTM3-209ENST00000565003 ZEB1P37275 1124 aaPredicted RBP13.11□□□□□ -0.31
CMTM3-209ENST00000565003 CRY2Q49AN0 593 aa13.11□□□□□ -0.31
CMTM3-209ENST00000565003 CCDC184Q52MB2 194 aa13.11□□□□□ -0.31
CMTM3-209ENST00000565003 RRAGCQ9HB90 399 aa13.11□□□□□ -0.31
CMTM3-209ENST00000565003 DICER1Q9UPY3 1922 aaKnown RBP13.1□□□□□ -0.31
CMTM3-209ENST00000565003 GLTPD2A6NH11 291 aa13.1□□□□□ -0.31
CMTM3-209ENST00000565003 NTSR2O95665 410 aa13.1□□□□□ -0.31
CMTM3-209ENST00000565003 SOGA3Q5TF21 947 aa13.1□□□□□ -0.31
CMTM3-209ENST00000565003 OLFM4Q6UX06 510 aa13.1□□□□□ -0.31
CMTM3-209ENST00000565003 XAGE3Q8WTP9 111 aa13.1□□□□□ -0.31
CMTM3-209ENST00000565003 CFAP44Q96MT7 982 aa13.1□□□□□ -0.31
CMTM3-209ENST00000565003 RIC1Q4ADV7 1423 aa13.1□□□□□ -0.31
CMTM3-209ENST00000565003 AIMP1Q12904 312 aaKnown RBP13.09□□□□□ -0.31
CMTM3-209ENST00000565003 CCDC93Q567U6 631 aa13.09□□□□□ -0.31
CMTM3-209ENST00000565003 COPS6Q7L5N1 327 aa13.09□□□□□ -0.31
CMTM3-209ENST00000565003 C16orf71Q8IYS4 520 aaPredicted RBP13.09□□□□□ -0.31
CMTM3-209ENST00000565003 RBM46Q8TBY0 533 aaKnown RBP13.09□□□□□ -0.31
CMTM3-209ENST00000565003 DDX21Q9NR30 783 aaKnown RBP eCLIP13.09□□□□□ -0.31
CMTM3-209ENST00000565003 MBIPQ9NS73 344 aa13.09□□□□□ -0.31
CMTM3-209ENST00000565003 CHPF2Q9P2E5 772 aa13.09□□□□□ -0.31
CMTM3-209ENST00000565003 SNED1Q8TER0 1413 aa13.08□□□□□ -0.32
CMTM3-209ENST00000565003 ANKRD36CQ5JPF3 1778 aa13.08□□□□□ -0.32
CMTM3-209ENST00000565003 HOXB7P09629 217 aa13.08□□□□□ -0.32
CMTM3-209ENST00000565003 ZNF853P0CG23 659 aa13.08□□□□□ -0.32
CMTM3-209ENST00000565003 PARP10Q53GL7 1025 aa13.08□□□□□ -0.32
CMTM3-209ENST00000565003 HDGFL1Q5TGJ6 251 aa13.08□□□□□ -0.32
CMTM3-209ENST00000565003 C3orf67Q6ZVT6 689 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms