RNA–Protein interactions for RNA: ENST00000564503.5

CAPN3-212, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-212ENST00000564503 CTBSQ01459 385 aa6.58□□□□□ -1.36
CAPN3-212ENST00000564503 NBPF1Q3BBV0 1214 aa6.58□□□□□ -1.36
CAPN3-212ENST00000564503 ARSJQ5FYB0 599 aaPredicted RBP6.58□□□□□ -1.36
CAPN3-212ENST00000564503 FIGNL1Q6PIW4 674 aa6.58□□□□□ -1.36
CAPN3-212ENST00000564503 USP17L2Q6R6M4 530 aa6.58□□□□□ -1.36
CAPN3-212ENST00000564503 USP17L1Q7RTZ2 530 aa6.58□□□□□ -1.36
CAPN3-212ENST00000564503 NLRP8Q86W28 1048 aa6.58□□□□□ -1.36
CAPN3-212ENST00000564503 TRIM50Q86XT4 487 aa6.58□□□□□ -1.36
CAPN3-212ENST00000564503 FNBP4Q8N3X1 1017 aaPredicted RBP6.58□□□□□ -1.36
CAPN3-212ENST00000564503 PCDHGC4Q9Y5F7 938 aa6.58□□□□□ -1.36
CAPN3-212ENST00000564503 PARP3Q9Y6F1 533 aa6.58□□□□□ -1.36
CAPN3-212ENST00000564503 CUL7Q14999 1698 aa6.58□□□□□ -1.36
CAPN3-212ENST00000564503 HECW1Q76N89 1606 aa6.58□□□□□ -1.36
CAPN3-212ENST00000564503 EFCAB5A4FU69 1503 aa6.57□□□□□ -1.36
CAPN3-212ENST00000564503 ATP9BO43861 1147 aa6.57□□□□□ -1.36
CAPN3-212ENST00000564503 BMP4P12644 408 aa6.57□□□□□ -1.36
CAPN3-212ENST00000564503 FGFR3P22607 806 aa6.57□□□□□ -1.36
CAPN3-212ENST00000564503 KANK3Q6NY19 840 aa6.57□□□□□ -1.36
CAPN3-212ENST00000564503 C1orf229Q6ZS94 237 aaPredicted RBP6.57□□□□□ -1.36
CAPN3-212ENST00000564503 C14orf37Q86TY3 774 aa6.57□□□□□ -1.36
CAPN3-212ENST00000564503 TNS4Q8IZW8 715 aa6.57□□□□□ -1.36
CAPN3-212ENST00000564503 ZIC5Q96T25 663 aa6.57□□□□□ -1.36
CAPN3-212ENST00000564503 ZDHHC3Q9NYG2 299 aa6.57□□□□□ -1.36
CAPN3-212ENST00000564503 FHAD1B1AJZ9 1412 aa6.57□□□□□ -1.36
CAPN3-212ENST00000564503 ATXN7O15265 892 aaPredicted RBP6.56□□□□□ -1.36
CAPN3-212ENST00000564503 TATP17735 454 aaPredicted RBP6.56□□□□□ -1.36
CAPN3-212ENST00000564503 EPHA4P54764 986 aa6.56□□□□□ -1.36
CAPN3-212ENST00000564503 CLDN10P78369 228 aa6.56□□□□□ -1.36
CAPN3-212ENST00000564503 FOXK2Q01167 660 aa6.56□□□□□ -1.36
CAPN3-212ENST00000564503 CCDC102BQ68D86 513 aa6.56□□□□□ -1.36
CAPN3-212ENST00000564503 PROSER2Q86WR7 435 aaPredicted RBP6.56□□□□□ -1.36
CAPN3-212ENST00000564503 BEND7Q8N7W2 519 aaPredicted RBP6.56□□□□□ -1.36
CAPN3-212ENST00000564503 GALNT6Q8NCL4 622 aa6.56□□□□□ -1.36
CAPN3-212ENST00000564503 TPCN2Q8NHX9 752 aa6.56□□□□□ -1.36
CAPN3-212ENST00000564503 ZDHHC1Q8WTX9 485 aa6.56□□□□□ -1.36
CAPN3-212ENST00000564503 MKRN1Q9UHC7 482 aaKnown RBP6.56□□□□□ -1.36
CAPN3-212ENST00000564503 KIAA1024Q9UPX6 916 aa6.56□□□□□ -1.36
CAPN3-212ENST00000564503 RBM19Q9Y4C8 960 aaKnown RBP6.56□□□□□ -1.36
CAPN3-212ENST00000564503 PTPN23Q9H3S7 1636 aa6.56□□□□□ -1.36
CAPN3-212ENST00000564503 SUPT6HQ7KZ85 1726 aaKnown RBP6.56□□□□□ -1.36
CAPN3-212ENST00000564503 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.56□□□□□ -1.36
CAPN3-212ENST00000564503 ANP32CO43423 234 aa6.55□□□□□ -1.36
CAPN3-212ENST00000564503 PPP1R15AO75807 674 aaPredicted RBP6.55□□□□□ -1.36
CAPN3-212ENST00000564503 TXLNAP40222 546 aa6.55□□□□□ -1.36
CAPN3-212ENST00000564503 ATP1A2P50993 1020 aa6.55□□□□□ -1.36
CAPN3-212ENST00000564503 TNP2Q05952 138 aa6.55□□□□□ -1.36
CAPN3-212ENST00000564503 TEAD4Q15561 434 aa6.55□□□□□ -1.36
CAPN3-212ENST00000564503 TBCELQ5QJ74 424 aa6.55□□□□□ -1.36
CAPN3-212ENST00000564503 SLC9A9Q8IVB4 645 aa6.55□□□□□ -1.36
CAPN3-212ENST00000564503 L3MBTL2Q969R5 705 aa6.55□□□□□ -1.36
CAPN3-212ENST00000564503 GDF2Q9UK05 429 aaPredicted RBP6.55□□□□□ -1.36
CAPN3-212ENST00000564503 HCN2Q9UL51 889 aa6.55□□□□□ -1.36
CAPN3-212ENST00000564503 CFTRP13569 1480 aa6.54□□□□□ -1.36
CAPN3-212ENST00000564503 NCAPD3P42695 1498 aa6.54□□□□□ -1.36
CAPN3-212ENST00000564503 FYCO1Q9BQS8 1478 aa6.54□□□□□ -1.36
CAPN3-212ENST00000564503 PHF20L1A8MW92 1017 aa6.54□□□□□ -1.36
CAPN3-212ENST00000564503 SHISA8B8ZZ34 492 aa6.54□□□□□ -1.36
CAPN3-212ENST00000564503 MAPTP10636 758 aaKnown RBP6.54□□□□□ -1.36
CAPN3-212ENST00000564503 NOS2P35228 1153 aa6.54□□□□□ -1.36
CAPN3-212ENST00000564503 DDX10Q13206 875 aaKnown RBP6.54□□□□□ -1.36
CAPN3-212ENST00000564503 BICDL1Q6ZP65 573 aa6.54□□□□□ -1.36
CAPN3-212ENST00000564503 PODNQ7Z5L7 613 aa6.54□□□□□ -1.36
CAPN3-212ENST00000564503 OGFOD1Q8N543 542 aa6.54□□□□□ -1.36
CAPN3-212ENST00000564503 GOLGA6L1Q8N7Z2 621 aa6.54□□□□□ -1.36
CAPN3-212ENST00000564503 EDARADDQ8WWZ3 215 aa6.54□□□□□ -1.36
CAPN3-212ENST00000564503 GLMNQ92990 594 aa6.54□□□□□ -1.36
CAPN3-212ENST00000564503 TFIP11Q9UBB9 837 aaKnown RBP6.54□□□□□ -1.36
CAPN3-212ENST00000564503 DNMT3AQ9Y6K1 912 aaPredicted RBP6.54□□□□□ -1.36
CAPN3-212ENST00000564503 ABCA5Q8WWZ7 1642 aa6.54□□□□□ -1.36
CAPN3-212ENST00000564503 AQRO60306 1485 aaKnown RBP eCLIP6.53□□□□□ -1.36
CAPN3-212ENST00000564503 FANCIQ9NVI1 1328 aa6.53□□□□□ -1.36
CAPN3-212ENST00000564503 DCDC2BA2VCK2 349 aa6.53□□□□□ -1.36
CAPN3-212ENST00000564503 PALM3A6NDB9 673 aaPredicted RBP6.53□□□□□ -1.36
CAPN3-212ENST00000564503 KHNYNO15037 678 aaKnown RBP6.53□□□□□ -1.36
CAPN3-212ENST00000564503 ITGAEP38570 1179 aa6.53□□□□□ -1.36
CAPN3-212ENST00000564503 LARGE2Q8N3Y3 721 aa6.53□□□□□ -1.36
CAPN3-212ENST00000564503 GGA1Q9UJY5 639 aa6.53□□□□□ -1.36
CAPN3-212ENST00000564503 ZNF232Q9UNY5 417 aa6.53□□□□□ -1.36
CAPN3-212ENST00000564503 GJA3Q9Y6H8 435 aa6.53□□□□□ -1.36
CAPN3-212ENST00000564503 SERTM1A2A2V5 107 aa6.52□□□□□ -1.37
CAPN3-212ENST00000564503 A6NJR5 290 aa6.52□□□□□ -1.37
CAPN3-212ENST00000564503 SNRPNP63162 240 aaKnown RBP6.52□□□□□ -1.37
CAPN3-212ENST00000564503 C7orf43Q8WVR3 580 aa6.52□□□□□ -1.37
CAPN3-212ENST00000564503 PHLDB1Q86UU1 1377 aa6.52□□□□□ -1.37
CAPN3-212ENST00000564503 CCDC18Q5T9S5 1454 aa6.52□□□□□ -1.37
CAPN3-212ENST00000564503 THOC2Q8NI27 1593 aaKnown RBP6.52□□□□□ -1.37
CAPN3-212ENST00000564503 M0R2N6 131 aa6.51□□□□□ -1.37
CAPN3-212ENST00000564503 EML1O00423 815 aa6.51□□□□□ -1.37
CAPN3-212ENST00000564503 DKK1O94907 266 aa6.51□□□□□ -1.37
CAPN3-212ENST00000564503 FAM157BP0CG42 384 aa6.51□□□□□ -1.37
CAPN3-212ENST00000564503 ARAFP10398 606 aa6.51□□□□□ -1.37
CAPN3-212ENST00000564503 CD33P20138 364 aa6.51□□□□□ -1.37
CAPN3-212ENST00000564503 FAM182BQ5T319 152 aa6.51□□□□□ -1.37
CAPN3-212ENST00000564503 SH3PXD2AQ5TCZ1 1133 aa6.51□□□□□ -1.37
CAPN3-212ENST00000564503 SAMD5Q5TGI4 173 aa6.51□□□□□ -1.37
CAPN3-212ENST00000564503 ERICH6BQ5W0A0 696 aa6.51□□□□□ -1.37
CAPN3-212ENST00000564503 SLCO4C1Q6ZQN7 724 aa6.51□□□□□ -1.37
CAPN3-212ENST00000564503 ZNF594Q96JF6 807 aaPredicted RBP6.51□□□□□ -1.37
CAPN3-212ENST00000564503 TSPAN10Q9H1Z9 355 aaPredicted RBP6.51□□□□□ -1.37
CAPN3-212ENST00000564503 MAFBQ9Y5Q3 323 aaPredicted RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms