RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 LMOD3Q0VAK6 560 aa19.77■□□□□ 0.76
SPG7-210ENST00000564409 DDX10Q13206 875 aaKnown RBP19.77■□□□□ 0.76
SPG7-210ENST00000564409 STYK1Q6J9G0 422 aa19.77■□□□□ 0.76
SPG7-210ENST00000564409 TPTE2Q6XPS3 522 aa19.77■□□□□ 0.76
SPG7-210ENST00000564409 NBPF5PQ86XG9 351 aaPredicted RBP19.77■□□□□ 0.76
SPG7-210ENST00000564409 ZNF622Q969S3 477 aaKnown RBP eCLIP19.77■□□□□ 0.766e-8■■■□□ 15.5
SPG7-210ENST00000564409 COL11A2P13942 1736 aaPredicted RBP19.76■□□□□ 0.75
SPG7-210ENST00000564409 TNRC6CQ9HCJ0 1690 aaKnown RBP19.76■□□□□ 0.75
SPG7-210ENST00000564409 SOGA3Q5TF21 947 aa19.76■□□□□ 0.75
SPG7-210ENST00000564409 FER1L6Q2WGJ9 1857 aa19.75■□□□□ 0.75
SPG7-210ENST00000564409 ARFGEF2Q9Y6D5 1785 aa19.75■□□□□ 0.75
SPG7-210ENST00000564409 ERVV-1B6SEH8 477 aa19.75■□□□□ 0.75
SPG7-210ENST00000564409 SRGNP10124 158 aa19.75■□□□□ 0.75
SPG7-210ENST00000564409 MASTLQ96GX5 879 aa19.75■□□□□ 0.75
SPG7-210ENST00000564409 NMRK2Q9NPI5 230 aa19.75■□□□□ 0.75
SPG7-210ENST00000564409 ERBB4Q15303 1308 aa19.75■□□□□ 0.75
SPG7-210ENST00000564409 DICER1Q9UPY3 1922 aaKnown RBP19.74■□□□□ 0.75
SPG7-210ENST00000564409 C16orf71Q8IYS4 520 aaPredicted RBP19.74■□□□□ 0.75
SPG7-210ENST00000564409 RBM46Q8TBY0 533 aaKnown RBP19.74■□□□□ 0.75
SPG7-210ENST00000564409 NIP7Q9Y221 180 aaKnown RBP eCLIP19.74■□□□□ 0.75
SPG7-210ENST00000564409 NUP98P52948 1817 aa19.74■□□□□ 0.75
SPG7-210ENST00000564409 RIPK4P57078 832 aa19.73■□□□□ 0.75
SPG7-210ENST00000564409 RASSF7Q02833 373 aa19.73■□□□□ 0.75
SPG7-210ENST00000564409 LTBP3Q9NS15 1303 aa19.73■□□□□ 0.75
SPG7-210ENST00000564409 SLX4Q8IY92 1834 aa19.72■□□□□ 0.75
SPG7-210ENST00000564409 KLRG2A4D1S0 409 aaPredicted RBP19.72■□□□□ 0.75
SPG7-210ENST00000564409 TMPOP42166 694 aaKnown RBP19.72■□□□□ 0.75
SPG7-210ENST00000564409 THUMPD2Q9BTF0 503 aaKnown RBP19.72■□□□□ 0.75
SPG7-210ENST00000564409 GLTPD2A6NH11 291 aa19.71■□□□□ 0.75
SPG7-210ENST00000564409 NFKBIEO00221 500 aa19.71■□□□□ 0.75
SPG7-210ENST00000564409 C21orf2O43822 256 aa19.71■□□□□ 0.75
SPG7-210ENST00000564409 APLP1P51693 650 aa19.71■□□□□ 0.75
SPG7-210ENST00000564409 KIF6Q6ZMV9 814 aa19.71■□□□□ 0.75
SPG7-210ENST00000564409 CCDC24Q8N4L8 307 aa19.71■□□□□ 0.75
SPG7-210ENST00000564409 NYXQ9GZU5 481 aa19.71■□□□□ 0.75
SPG7-210ENST00000564409 TSPYL4Q9UJ04 414 aa19.71■□□□□ 0.75
SPG7-210ENST00000564409 MAP3K15Q6ZN16 1313 aa19.71■□□□□ 0.75
SPG7-210ENST00000564409 CACNA1SQ13698 1873 aa19.71■□□□□ 0.75
SPG7-210ENST00000564409 TIAM2Q8IVF5 1701 aa19.71■□□□□ 0.75
SPG7-210ENST00000564409 NPR1P16066 1061 aa19.7■□□□□ 0.74
SPG7-210ENST00000564409 FSTL1Q12841 308 aa19.7■□□□□ 0.74
SPG7-210ENST00000564409 WDR43Q15061 677 aaKnown RBP eCLIP19.69■□□□□ 0.74
SPG7-210ENST00000564409 PRPF40BQ6NWY9 871 aaKnown RBP19.69■□□□□ 0.74
SPG7-210ENST00000564409 RRP7AQ9Y3A4 280 aaKnown RBP19.69■□□□□ 0.74
SPG7-210ENST00000564409 GTF2E1P29083 439 aaPredicted RBP19.68■□□□□ 0.74
SPG7-210ENST00000564409 HLFQ16534 295 aa19.68■□□□□ 0.74
SPG7-210ENST00000564409 DPY19L2Q6NUT2 758 aa19.68■□□□□ 0.74
SPG7-210ENST00000564409 RUNDC1Q96C34 613 aa19.68■□□□□ 0.74
SPG7-210ENST00000564409 TAOK3Q9H2K8 898 aa19.68■□□□□ 0.74
SPG7-210ENST00000564409 RRAGCQ9HB90 399 aa19.68■□□□□ 0.74
SPG7-210ENST00000564409 IBTKQ9P2D0 1353 aaPredicted RBP19.68■□□□□ 0.74
SPG7-210ENST00000564409 VEGFAP15692 232 aaPredicted RBP19.67■□□□□ 0.74
SPG7-210ENST00000564409 PRELPP51888 382 aa19.67■□□□□ 0.74
SPG7-210ENST00000564409 ALDH1B1P30837 517 aa19.66■□□□□ 0.74
SPG7-210ENST00000564409 NGEFQ8N5V2 710 aa19.66■□□□□ 0.74
SPG7-210ENST00000564409 MYL6BP14649 208 aa19.65■□□□□ 0.74
SPG7-210ENST00000564409 ERFEQ4G0M1 354 aa19.65■□□□□ 0.74
SPG7-210ENST00000564409 C7orf43Q8WVR3 580 aa19.65■□□□□ 0.74
SPG7-210ENST00000564409 ZNF219Q9P2Y4 722 aaPredicted RBP19.65■□□□□ 0.74
SPG7-210ENST00000564409 RIC1Q4ADV7 1423 aa19.65■□□□□ 0.74
SPG7-210ENST00000564409 CCDC93Q567U6 631 aa19.64■□□□□ 0.73
SPG7-210ENST00000564409 GIGYF2Q6Y7W6 1299 aaKnown RBP19.64■□□□□ 0.73
SPG7-210ENST00000564409 TTLL7Q6ZT98 887 aa19.64■□□□□ 0.73
SPG7-210ENST00000564409 SMC1BQ8NDV3 1235 aa19.64■□□□□ 0.73
SPG7-210ENST00000564409 PRKRIP1Q9H875 184 aaPredicted RBP19.64■□□□□ 0.73
SPG7-210ENST00000564409 WDR90Q96KV7 1748 aa19.64■□□□□ 0.73
SPG7-210ENST00000564409 CEP350Q5VT06 3117 aa19.64■□□□□ 0.73
SPG7-210ENST00000564409 CRY2Q49AN0 593 aa19.63■□□□□ 0.73
SPG7-210ENST00000564409 ZNF34Q8IZ26 560 aa19.63■□□□□ 0.73
SPG7-210ENST00000564409 RTKN2Q8IZC4 609 aa19.63■□□□□ 0.73
SPG7-210ENST00000564409 FAM177BA6PVY3 158 aa19.62■□□□□ 0.73
SPG7-210ENST00000564409 CHL1O00533 1208 aa19.62■□□□□ 0.73
SPG7-210ENST00000564409 PARP10Q53GL7 1025 aa19.62■□□□□ 0.73
SPG7-210ENST00000564409 PPP1R42Q7Z4L9 355 aa19.62■□□□□ 0.73
SPG7-210ENST00000564409 ZBTB3Q9H5J0 574 aa19.62■□□□□ 0.73
SPG7-210ENST00000564409 EIF2S2P20042 333 aaKnown RBP19.61■□□□□ 0.73
SPG7-210ENST00000564409 PDIA6Q15084 440 aa19.61■□□□□ 0.73
SPG7-210ENST00000564409 GRIPAP1Q4V328 841 aa19.61■□□□□ 0.73
SPG7-210ENST00000564409 CC2D2BQ6DHV5 1058 aa19.61■□□□□ 0.73
SPG7-210ENST00000564409 CCDC146Q8IYE0 955 aa19.61■□□□□ 0.73
SPG7-210ENST00000564409 ADAMTS8Q9UP79 889 aa19.61■□□□□ 0.73
SPG7-210ENST00000564409 HOXA10P31260 410 aaPredicted RBP19.6■□□□□ 0.73
SPG7-210ENST00000564409 FKBP4Q02790 459 aaKnown RBP eCLIP19.6■□□□□ 0.73
SPG7-210ENST00000564409 NEUROD2Q15784 382 aa19.6■□□□□ 0.73
SPG7-210ENST00000564409 LRP10Q7Z4F1 713 aa19.6■□□□□ 0.73
SPG7-210ENST00000564409 TRIM35Q9UPQ4 493 aa19.6■□□□□ 0.73
SPG7-210ENST00000564409 RNF123Q5XPI4 1314 aa19.59■□□□□ 0.73
SPG7-210ENST00000564409 HOXB7P09629 217 aa19.59■□□□□ 0.73
SPG7-210ENST00000564409 HSP90AB3PQ58FF7 597 aa19.59■□□□□ 0.73
SPG7-210ENST00000564409 UBN2Q6ZU65 1347 aa19.58■□□□□ 0.73
SPG7-210ENST00000564409 NUTM1Q86Y26 1132 aa19.58■□□□□ 0.72
SPG7-210ENST00000564409 RPGRQ92834 1020 aaKnown RBP19.58■□□□□ 0.72
SPG7-210ENST00000564409 ABCC12Q96J65 1359 aa19.57■□□□□ 0.72
SPG7-210ENST00000564409 ANKRD36CQ5JPF3 1778 aa19.57■□□□□ 0.72
SPG7-210ENST00000564409 NTSR2O95665 410 aa19.57■□□□□ 0.72
SPG7-210ENST00000564409 GPTP24298 496 aa19.57■□□□□ 0.72
SPG7-210ENST00000564409 SUSD4Q5VX71 490 aa19.57■□□□□ 0.72
SPG7-210ENST00000564409 DNAJC5GQ8N7S2 189 aa19.57■□□□□ 0.72
SPG7-210ENST00000564409 CRAMP1Q96RY5 1269 aa19.57■□□□□ 0.72
SPG7-210ENST00000564409 DDX21Q9NR30 783 aaKnown RBP eCLIP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms