RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 CCDC27Q2M243 656 aa19.38■□□□□ 0.69
RPUSD1-204ENST00000563560 TTLL7Q6ZT98 887 aa19.38■□□□□ 0.69
RPUSD1-204ENST00000563560 MBIPQ9NS73 344 aa19.38■□□□□ 0.69
RPUSD1-204ENST00000563560 ATP10DQ9P241 1426 aa19.38■□□□□ 0.69
RPUSD1-204ENST00000563560 BICDL1Q6ZP65 573 aa19.37■□□□□ 0.69
RPUSD1-204ENST00000563560 PELP1Q8IZL8 1130 aaKnown RBP19.37■□□□□ 0.69
RPUSD1-204ENST00000563560 IFT57Q9NWB7 429 aa19.37■□□□□ 0.69
RPUSD1-204ENST00000563560 WWC3Q9ULE0 1092 aa19.37■□□□□ 0.69
RPUSD1-204ENST00000563560 CACNA1SQ13698 1873 aa19.37■□□□□ 0.69
RPUSD1-204ENST00000563560 ERVV-1B6SEH8 477 aa19.36■□□□□ 0.69
RPUSD1-204ENST00000563560 MAP3K15Q6ZN16 1313 aa19.35■□□□□ 0.69
RPUSD1-204ENST00000563560 HOXB7P09629 217 aa19.35■□□□□ 0.69
RPUSD1-204ENST00000563560 FER1L6Q2WGJ9 1857 aa19.34■□□□□ 0.69
RPUSD1-204ENST00000563560 SLX4Q8IY92 1834 aa19.34■□□□□ 0.69
RPUSD1-204ENST00000563560 ANXA1P04083 346 aa19.33■□□□□ 0.68
RPUSD1-204ENST00000563560 MYL6BP14649 208 aa19.33■□□□□ 0.68
RPUSD1-204ENST00000563560 WWC1Q8IX03 1113 aa19.33■□□□□ 0.68
RPUSD1-204ENST00000563560 SETDB2Q96T68 719 aa19.33■□□□□ 0.68
RPUSD1-204ENST00000563560 PIM2Q9P1W9 311 aa19.33■□□□□ 0.68
RPUSD1-204ENST00000563560 UBN2Q6ZU65 1347 aa19.32■□□□□ 0.68
RPUSD1-204ENST00000563560 KLRG2A4D1S0 409 aaPredicted RBP19.32■□□□□ 0.68
RPUSD1-204ENST00000563560 ZNF784Q8NCA9 323 aaPredicted RBP19.32■□□□□ 0.68
RPUSD1-204ENST00000563560 BRIP1Q9BX63 1249 aa19.32■□□□□ 0.68
RPUSD1-204ENST00000563560 LAMB2P55268 1798 aa19.32■□□□□ 0.68
RPUSD1-204ENST00000563560 IBTKQ9P2D0 1353 aaPredicted RBP19.32■□□□□ 0.68
RPUSD1-204ENST00000563560 CCDC88AQ3V6T2 1871 aa19.31■□□□□ 0.68
RPUSD1-204ENST00000563560 EIF2S2P20042 333 aaKnown RBP19.31■□□□□ 0.68
RPUSD1-204ENST00000563560 GNAI1P63096 354 aa19.31■□□□□ 0.68
RPUSD1-204ENST00000563560 ZNF34Q8IZ26 560 aa19.31■□□□□ 0.68
RPUSD1-204ENST00000563560 CCDC24Q8N4L8 307 aa19.31■□□□□ 0.68
RPUSD1-204ENST00000563560 DDX21Q9NR30 783 aaKnown RBP eCLIP19.31■□□□□ 0.68
RPUSD1-204ENST00000563560 BCS1LQ9Y276 419 aa19.31■□□□□ 0.68
RPUSD1-204ENST00000563560 ZNF652Q9Y2D9 606 aa19.31■□□□□ 0.68
RPUSD1-204ENST00000563560 LAS1LQ9Y4W2 734 aaKnown RBP19.31■□□□□ 0.68
RPUSD1-204ENST00000563560 RIC1Q4ADV7 1423 aa19.3■□□□□ 0.68
RPUSD1-204ENST00000563560 SENP3-EIF4A1A0A087X0R7 540 aa19.29■□□□□ 0.68
RPUSD1-204ENST00000563560 DUSP27Q5VZP5 1158 aa19.29■□□□□ 0.68
RPUSD1-204ENST00000563560 GIGYF2Q6Y7W6 1299 aaKnown RBP19.29■□□□□ 0.68
RPUSD1-204ENST00000563560 NPM2Q86SE8 214 aaKnown RBP19.29■□□□□ 0.68
RPUSD1-204ENST00000563560 NGEFQ8N5V2 710 aa19.29■□□□□ 0.68
RPUSD1-204ENST00000563560 CNBD1Q8NA66 436 aa19.29■□□□□ 0.68
RPUSD1-204ENST00000563560 C8orf58Q8NAV2 365 aa19.29■□□□□ 0.68
RPUSD1-204ENST00000563560 CHPF2Q9P2E5 772 aa19.29■□□□□ 0.68
RPUSD1-204ENST00000563560 NIP7Q9Y221 180 aaKnown RBP eCLIP19.29■□□□□ 0.68
RPUSD1-204ENST00000563560 ABCC12Q96J65 1359 aa19.29■□□□□ 0.68
RPUSD1-204ENST00000563560 IL16Q14005 1332 aa19.28■□□□□ 0.68
RPUSD1-204ENST00000563560 CALD1Q05682 793 aaKnown RBP19.28■□□□□ 0.68
RPUSD1-204ENST00000563560 DALRD3Q5D0E6 543 aaKnown RBP19.28■□□□□ 0.68
RPUSD1-204ENST00000563560 C2CD5Q86YS7 1000 aa19.28■□□□□ 0.68
RPUSD1-204ENST00000563560 NECTIN2Q92692 538 aa19.28■□□□□ 0.68
RPUSD1-204ENST00000563560 ZBTB3Q9H5J0 574 aa19.28■□□□□ 0.68
RPUSD1-204ENST00000563560 DICER1Q9UPY3 1922 aaKnown RBP19.27■□□□□ 0.68
RPUSD1-204ENST00000563560 CACNA1FO60840 1977 aa19.27■□□□□ 0.68
RPUSD1-204ENST00000563560 SRGNP10124 158 aa19.27■□□□□ 0.68
RPUSD1-204ENST00000563560 COPS6Q7L5N1 327 aa19.27■□□□□ 0.68
RPUSD1-204ENST00000563560 DDX60Q8IY21 1712 aaKnown RBP19.27■□□□□ 0.68
RPUSD1-204ENST00000563560 PDE6BP35913 854 aa19.26■□□□□ 0.67
RPUSD1-204ENST00000563560 PRELPP51888 382 aa19.26■□□□□ 0.67
RPUSD1-204ENST00000563560 HDGFL1Q5TGJ6 251 aa19.26■□□□□ 0.67
RPUSD1-204ENST00000563560 KIF6Q6ZMV9 814 aa19.26■□□□□ 0.67
RPUSD1-204ENST00000563560 NBPF5PQ86XG9 351 aaPredicted RBP19.26■□□□□ 0.67
RPUSD1-204ENST00000563560 TSPYL6Q8N831 410 aa19.26■□□□□ 0.67
RPUSD1-204ENST00000563560 XAGE3Q8WTP9 111 aa19.26■□□□□ 0.67
RPUSD1-204ENST00000563560 PDZRN3Q9UPQ7 1066 aa19.26■□□□□ 0.67
RPUSD1-204ENST00000563560 ZNF521Q96K83 1311 aa19.25■□□□□ 0.67
RPUSD1-204ENST00000563560 NTSR2O95665 410 aa19.25■□□□□ 0.67
RPUSD1-204ENST00000563560 SUSD4Q5VX71 490 aa19.25■□□□□ 0.67
RPUSD1-204ENST00000563560 SNED1Q8TER0 1413 aa19.25■□□□□ 0.67
RPUSD1-204ENST00000563560 H0YIN7 160 aa19.24■□□□□ 0.67
RPUSD1-204ENST00000563560 TTLL6Q8N841 843 aa19.24■□□□□ 0.67
RPUSD1-204ENST00000563560 TSR2Q969E8 191 aaKnown RBP19.24■□□□□ 0.67
RPUSD1-204ENST00000563560 SPINK5Q9NQ38 1064 aaPredicted RBP19.24■□□□□ 0.67
RPUSD1-204ENST00000563560 DBF4Q9UBU7 674 aaPredicted RBP19.24■□□□□ 0.67
RPUSD1-204ENST00000563560 TIAM2Q8IVF5 1701 aa19.24■□□□□ 0.67
RPUSD1-204ENST00000563560 ST5P78524 1137 aa19.23■□□□□ 0.67
RPUSD1-204ENST00000563560 CRY2Q49AN0 593 aa19.23■□□□□ 0.67
RPUSD1-204ENST00000563560 STYK1Q6J9G0 422 aa19.23■□□□□ 0.67
RPUSD1-204ENST00000563560 TPTE2Q6XPS3 522 aa19.23■□□□□ 0.67
RPUSD1-204ENST00000563560 WDR63Q8IWG1 891 aa19.22■□□□□ 0.67
RPUSD1-204ENST00000563560 C7orf43Q8WVR3 580 aa19.22■□□□□ 0.67
RPUSD1-204ENST00000563560 GPTP24298 496 aa19.21■□□□□ 0.67
RPUSD1-204ENST00000563560 ERFEQ4G0M1 354 aa19.21■□□□□ 0.67
RPUSD1-204ENST00000563560 NUTM1Q86Y26 1132 aa19.21■□□□□ 0.67
RPUSD1-204ENST00000563560 FAM9BQ8IZU0 186 aa19.21■□□□□ 0.67
RPUSD1-204ENST00000563560 FANCIQ9NVI1 1328 aa19.21■□□□□ 0.67
RPUSD1-204ENST00000563560 NFKBIEO00221 500 aa19.2■□□□□ 0.66
RPUSD1-204ENST00000563560 ELL2O00472 640 aaPredicted RBP19.2■□□□□ 0.66
RPUSD1-204ENST00000563560 TCIRG1Q13488 830 aa19.2■□□□□ 0.66
RPUSD1-204ENST00000563560 ARHGAP27Q6ZUM4 889 aa19.2■□□□□ 0.66
RPUSD1-204ENST00000563560 PLBD2Q8NHP8 589 aa19.2■□□□□ 0.66
RPUSD1-204ENST00000563560 MASTLQ96GX5 879 aa19.2■□□□□ 0.66
RPUSD1-204ENST00000563560 PHAXQ9H814 394 aaKnown RBP19.2■□□□□ 0.66
RPUSD1-204ENST00000563560 FAM177BA6PVY3 158 aa19.19■□□□□ 0.66
RPUSD1-204ENST00000563560 AIMP1Q12904 312 aaKnown RBP19.19■□□□□ 0.66
RPUSD1-204ENST00000563560 PARP10Q53GL7 1025 aa19.19■□□□□ 0.66
RPUSD1-204ENST00000563560 SLC10A5Q5PT55 438 aa19.19■□□□□ 0.66
RPUSD1-204ENST00000563560 C3orf67Q6ZVT6 689 aa19.19■□□□□ 0.66
RPUSD1-204ENST00000563560 NLRP10Q86W26 655 aa19.19■□□□□ 0.66
RPUSD1-204ENST00000563560 ISCA1Q9BUE6 129 aa19.19■□□□□ 0.66
RPUSD1-204ENST00000563560 NYXQ9GZU5 481 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms