RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 TADA2BQ86TJ2 420 aa7.2□□□□□ -1.26
CLK3-212ENST00000563418 NEK11Q8NG66 645 aa7.2□□□□□ -1.26
CLK3-212ENST00000563418 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.2□□□□□ -1.26
CLK3-212ENST00000563418 VCX3BQ9H321 246 aa7.2□□□□□ -1.26
CLK3-212ENST00000563418 VCX3AQ9NNX9 186 aa7.2□□□□□ -1.26
CLK3-212ENST00000563418 STIM1Q13586 685 aa7.2□□□□□ -1.26
CLK3-212ENST00000563418 TMEM51Q9NW97 253 aa7.2□□□□□ -1.26
CLK3-212ENST00000563418 ZSCAN22P10073 491 aaPredicted RBP7.2□□□□□ -1.26
CLK3-212ENST00000563418 HNRNPH2P55795 449 aaKnown RBP7.2□□□□□ -1.26
CLK3-212ENST00000563418 KRT32Q14532 448 aa7.2□□□□□ -1.26
CLK3-212ENST00000563418 CCDC65Q8IXS2 484 aa7.2□□□□□ -1.26
CLK3-212ENST00000563418 FBXO18Q8NFZ0 1043 aa7.2□□□□□ -1.26
CLK3-212ENST00000563418 USH1CQ9Y6N9 552 aa7.2□□□□□ -1.26
CLK3-212ENST00000563418 CACNA2D4Q7Z3S7 1137 aa7.2□□□□□ -1.26
CLK3-212ENST00000563418 RRP7AQ9Y3A4 280 aaKnown RBP7.2□□□□□ -1.26
CLK3-212ENST00000563418 CECR2Q9BXF3 1484 aa7.2□□□□□ -1.26
CLK3-212ENST00000563418 DYNC1I2Q13409 638 aaKnown RBP7.19□□□□□ -1.26
CLK3-212ENST00000563418 SAAL1Q96ER3 474 aa7.19□□□□□ -1.26
CLK3-212ENST00000563418 RPGRIP1Q96KN7 1286 aa7.19□□□□□ -1.26
CLK3-212ENST00000563418 CCDC92Q53HC0 331 aaPredicted RBP7.19□□□□□ -1.26
CLK3-212ENST00000563418 TBC1D31Q96DN5 1066 aa7.19□□□□□ -1.26
CLK3-212ENST00000563418 JAKMIP1Q96N16 626 aaKnown RBP7.19□□□□□ -1.26
CLK3-212ENST00000563418 PSMD7P51665 324 aa7.19□□□□□ -1.26
CLK3-212ENST00000563418 ANO6Q4KMQ2 910 aa7.19□□□□□ -1.26
CLK3-212ENST00000563418 TYRO3Q06418 890 aa7.19□□□□□ -1.26
CLK3-212ENST00000563418 SEPT7Q16181 437 aaKnown RBP7.19□□□□□ -1.26
CLK3-212ENST00000563418 DESP17661 470 aa7.19□□□□□ -1.26
CLK3-212ENST00000563418 C20orf194Q5TEA3 1177 aa7.19□□□□□ -1.26
CLK3-212ENST00000563418 CHMP4BP1P59074 171 aa7.19□□□□□ -1.26
CLK3-212ENST00000563418 FBLN2P98095 1184 aa7.19□□□□□ -1.26
CLK3-212ENST00000563418 NBPF9Q3BBW0 867 aa7.19□□□□□ -1.26
CLK3-212ENST00000563418 ATRIPQ8WXE1 791 aa7.19□□□□□ -1.26
CLK3-212ENST00000563418 SAMD15Q9P1V8 674 aa7.19□□□□□ -1.26
CLK3-212ENST00000563418 LIMCH1Q9UPQ0 1083 aa7.19□□□□□ -1.26
CLK3-212ENST00000563418 CAPN7Q9Y6W3 813 aa7.19□□□□□ -1.26
CLK3-212ENST00000563418 TRAF1Q13077 416 aa7.19□□□□□ -1.26
CLK3-212ENST00000563418 CCDC6Q16204 474 aa7.19□□□□□ -1.26
CLK3-212ENST00000563418 ARMC9Q7Z3E5 817 aa7.19□□□□□ -1.26
CLK3-212ENST00000563418 DNAJC8O75937 253 aaPredicted RBP7.19□□□□□ -1.26
CLK3-212ENST00000563418 TBC1D9Q6ZT07 1266 aa7.19□□□□□ -1.26
CLK3-212ENST00000563418 STAG3Q9UJ98 1225 aa7.19□□□□□ -1.26
CLK3-212ENST00000563418 PTPN23Q9H3S7 1636 aa7.19□□□□□ -1.26
CLK3-212ENST00000563418 LRRD1A4D1F6 860 aa7.19□□□□□ -1.26
CLK3-212ENST00000563418 USO1O60763 962 aaKnown RBP7.19□□□□□ -1.26
CLK3-212ENST00000563418 CCDC174Q6PII3 467 aa7.19□□□□□ -1.26
CLK3-212ENST00000563418 PPFIBP2Q8ND30 876 aa7.19□□□□□ -1.26
CLK3-212ENST00000563418 CCHCR1Q8TD31 782 aa7.19□□□□□ -1.26
CLK3-212ENST00000563418 TAF4BQ92750 862 aa7.19□□□□□ -1.26
CLK3-212ENST00000563418 SYNJ1O43426 1573 aa7.18□□□□□ -1.26
CLK3-212ENST00000563418 APLFQ8IW19 511 aaPredicted RBP7.18□□□□□ -1.26
CLK3-212ENST00000563418 MICAL1Q8TDZ2 1067 aa7.18□□□□□ -1.26
CLK3-212ENST00000563418 CHUKO15111 745 aa7.18□□□□□ -1.26
CLK3-212ENST00000563418 YEATS4O95619 227 aa7.18□□□□□ -1.26
CLK3-212ENST00000563418 PCK1P35558 622 aa7.18□□□□□ -1.26
CLK3-212ENST00000563418 SPA17Q15506 151 aa7.18□□□□□ -1.26
CLK3-212ENST00000563418 TAX1BP1Q86VP1 789 aa7.18□□□□□ -1.26
CLK3-212ENST00000563418 PDRG1Q9NUG6 133 aa7.18□□□□□ -1.26
CLK3-212ENST00000563418 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.18□□□□□ -1.26
CLK3-212ENST00000563418 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.18□□□□□ -1.26
CLK3-212ENST00000563418 DUSP27Q5VZP5 1158 aa7.18□□□□□ -1.26
CLK3-212ENST00000563418 USP48Q86UV5 1035 aa7.18□□□□□ -1.26
CLK3-212ENST00000563418 DDX27Q96GQ7 796 aaKnown RBP7.18□□□□□ -1.26
CLK3-212ENST00000563418 ABCC11Q96J66 1382 aa7.18□□□□□ -1.26
CLK3-212ENST00000563418 CREB3O43889 395 aa7.18□□□□□ -1.26
CLK3-212ENST00000563418 PPFIA4O75335 1185 aa7.18□□□□□ -1.26
CLK3-212ENST00000563418 MAP3K9P80192 1104 aa7.18□□□□□ -1.26
CLK3-212ENST00000563418 AIMP1Q12904 312 aaKnown RBP7.18□□□□□ -1.26
CLK3-212ENST00000563418 CCDC129Q6ZRS4 1044 aa7.18□□□□□ -1.26
CLK3-212ENST00000563418 CTAGE1Q96RT6 745 aa7.18□□□□□ -1.26
CLK3-212ENST00000563418 FAM177BA6PVY3 158 aa7.18□□□□□ -1.26
CLK3-212ENST00000563418 IFIT2P09913 472 aaKnown RBP7.18□□□□□ -1.26
CLK3-212ENST00000563418 ALDH1L2Q3SY69 923 aa7.18□□□□□ -1.26
CLK3-212ENST00000563418 ZSCAN16Q9H4T2 348 aaPredicted RBP7.18□□□□□ -1.26
CLK3-212ENST00000563418 GNL3LQ9NVN8 582 aaKnown RBP7.18□□□□□ -1.26
CLK3-212ENST00000563418 LARSQ9P2J5 1176 aaKnown RBP7.18□□□□□ -1.26
CLK3-212ENST00000563418 MYCNP04198 464 aaPredicted RBP7.18□□□□□ -1.26
CLK3-212ENST00000563418 NPM1P06748 294 aaKnown RBP eCLIP7.18□□□□□ -1.26
CLK3-212ENST00000563418 DDX12PQ92771 950 aa7.18□□□□□ -1.26
CLK3-212ENST00000563418 SPTLC3Q9NUV7 552 aa7.18□□□□□ -1.26
CLK3-212ENST00000563418 TRIM7Q9C029 511 aa7.18□□□□□ -1.26
CLK3-212ENST00000563418 ANTXR1Q9H6X2 564 aa7.18□□□□□ -1.26
CLK3-212ENST00000563418 STIM2Q9P246 746 aa7.18□□□□□ -1.26
CLK3-212ENST00000563418 TAOK2Q9UL54 1235 aa7.18□□□□□ -1.26
CLK3-212ENST00000563418 NPHP3Q7Z494 1330 aa7.18□□□□□ -1.26
CLK3-212ENST00000563418 CYP2C19P33261 490 aa7.18□□□□□ -1.26
CLK3-212ENST00000563418 SPECC1Q5M775 1068 aa7.18□□□□□ -1.26
CLK3-212ENST00000563418 CFAP57Q96MR6 1250 aa7.18□□□□□ -1.26
CLK3-212ENST00000563418 BATF3Q9NR55 127 aa7.18□□□□□ -1.26
CLK3-212ENST00000563418 GNAI3P08754 354 aa7.17□□□□□ -1.26
CLK3-212ENST00000563418 ATP2B3Q16720 1220 aa7.17□□□□□ -1.26
CLK3-212ENST00000563418 SMARCC2Q8TAQ2 1214 aa7.17□□□□□ -1.26
CLK3-212ENST00000563418 ERBB4Q15303 1308 aa7.17□□□□□ -1.26
CLK3-212ENST00000563418 PPP1R12BO60237 982 aaPredicted RBP7.17□□□□□ -1.26
CLK3-212ENST00000563418 XBP1P17861 261 aa7.17□□□□□ -1.26
CLK3-212ENST00000563418 SYT1P21579 422 aa7.17□□□□□ -1.26
CLK3-212ENST00000563418 CDC25BP30305 580 aa7.17□□□□□ -1.26
CLK3-212ENST00000563418 CCAR1Q8IX12 1150 aaKnown RBP7.17□□□□□ -1.26
CLK3-212ENST00000563418 RPAP2Q8IXW5 612 aaPredicted RBP7.17□□□□□ -1.26
CLK3-212ENST00000563418 RUSC2Q8N2Y8 1516 aa7.17□□□□□ -1.26
CLK3-212ENST00000563418 SLC4A10Q6U841 1118 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms