RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 SLC16A10Q8TF71 515 aa8.13□□□□□ -1.11
CNOT1-204ENST00000563130 BBXQ8WY36 941 aaPredicted RBP8.13□□□□□ -1.11
CNOT1-204ENST00000563130 AK7Q96M32 723 aa8.13□□□□□ -1.11
CNOT1-204ENST00000563130 FMNL2Q96PY5 1086 aa8.13□□□□□ -1.11
CNOT1-204ENST00000563130 BABAM1Q9NWV8 329 aa8.13□□□□□ -1.11
CNOT1-204ENST00000563130 COLQQ9Y215 455 aaPredicted RBP8.13□□□□□ -1.11
CNOT1-204ENST00000563130 LRP5O75197 1615 aa8.13□□□□□ -1.11
CNOT1-204ENST00000563130 MYH14Q7Z406 1995 aaKnown RBP8.13□□□□□ -1.11
CNOT1-204ENST00000563130 CRKLP46109 303 aaKnown RBP8.12□□□□□ -1.11
CNOT1-204ENST00000563130 INTS5Q6P9B9 1019 aaKnown RBP8.12□□□□□ -1.11
CNOT1-204ENST00000563130 MTFR1LQ9H019 292 aa8.12□□□□□ -1.11
CNOT1-204ENST00000563130 MIS18AQ9NYP9 233 aa8.12□□□□□ -1.11
CNOT1-204ENST00000563130 KDM3BQ7LBC6 1761 aa8.12□□□□□ -1.11
CNOT1-204ENST00000563130 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.12□□□□□ -1.11
CNOT1-204ENST00000563130 GNPATO15228 680 aa8.12□□□□□ -1.11
CNOT1-204ENST00000563130 RPS6KA4O75676 772 aa8.12□□□□□ -1.11
CNOT1-204ENST00000563130 CCDC27Q2M243 656 aa8.12□□□□□ -1.11
CNOT1-204ENST00000563130 TPRNQ4KMQ1 711 aa8.12□□□□□ -1.11
CNOT1-204ENST00000563130 TEX13AQ9BXU3 409 aaPredicted RBP8.12□□□□□ -1.11
CNOT1-204ENST00000563130 CHL1O00533 1208 aa8.11□□□□□ -1.11
CNOT1-204ENST00000563130 ZBTB7AO95365 584 aa8.11□□□□□ -1.11
CNOT1-204ENST00000563130 PTGER2P43116 358 aa8.11□□□□□ -1.11
CNOT1-204ENST00000563130 EIF4A1P60842 406 aaKnown RBP8.11□□□□□ -1.11
CNOT1-204ENST00000563130 SMIM5Q71RC9 77 aa8.11□□□□□ -1.11
CNOT1-204ENST00000563130 SPON1Q9HCB6 807 aa8.11□□□□□ -1.11
CNOT1-204ENST00000563130 RTCBQ9Y3I0 505 aaKnown RBP8.11□□□□□ -1.11
CNOT1-204ENST00000563130 COL24A1Q17RW2 1714 aa8.11□□□□□ -1.11
CNOT1-204ENST00000563130 POTEFA5A3E0 1075 aa8.1□□□□□ -1.11
CNOT1-204ENST00000563130 SNRPA1P09661 255 aaKnown RBP8.1□□□□□ -1.11
CNOT1-204ENST00000563130 FAM9BQ8IZU0 186 aa8.1□□□□□ -1.11
CNOT1-204ENST00000563130 MFRPQ9BY79 579 aa8.1□□□□□ -1.11
CNOT1-204ENST00000563130 RYDENQ9NUL5 291 aaKnown RBP8.1□□□□□ -1.11
CNOT1-204ENST00000563130 CCDC87Q9NVE4 849 aa8.1□□□□□ -1.11
CNOT1-204ENST00000563130 USP16Q9Y5T5 823 aa8.1□□□□□ -1.11
CNOT1-204ENST00000563130 PRAMEF22A3QJZ6 481 aa8.1□□□□□ -1.11
CNOT1-204ENST00000563130 GIGYF1O75420 1035 aaPredicted RBP8.1□□□□□ -1.11
CNOT1-204ENST00000563130 STARD3NLO95772 234 aa8.1□□□□□ -1.11
CNOT1-204ENST00000563130 ZNF853P0CG23 659 aa8.1□□□□□ -1.11
CNOT1-204ENST00000563130 PDCD7Q8N8D1 485 aaKnown RBP8.1□□□□□ -1.11
CNOT1-204ENST00000563130 CFAP44Q96MT7 982 aa8.1□□□□□ -1.11
CNOT1-204ENST00000563130 ZBTB1Q9Y2K1 713 aa8.1□□□□□ -1.11
CNOT1-204ENST00000563130 SOS1Q07889 1333 aaPredicted RBP8.09□□□□□ -1.11
CNOT1-204ENST00000563130 PHF14O94880 888 aa8.09□□□□□ -1.11
CNOT1-204ENST00000563130 TRAPPC3LQ5T215 181 aa8.09□□□□□ -1.11
CNOT1-204ENST00000563130 WWC1Q8IX03 1113 aa8.09□□□□□ -1.11
CNOT1-204ENST00000563130 ARHGEF1Q92888 912 aaKnown RBP8.09□□□□□ -1.11
CNOT1-204ENST00000563130 TSPYL4Q9UJ04 414 aa8.09□□□□□ -1.11
CNOT1-204ENST00000563130 EIF5P55010 431 aaKnown RBP8.09□□□□□ -1.11
CNOT1-204ENST00000563130 CALD1Q05682 793 aaKnown RBP8.08□□□□□ -1.12
CNOT1-204ENST00000563130 NGEFQ8N5V2 710 aa8.08□□□□□ -1.12
CNOT1-204ENST00000563130 FBXO22Q8NEZ5 403 aa8.08□□□□□ -1.12
CNOT1-204ENST00000563130 IFT57Q9NWB7 429 aa8.08□□□□□ -1.12
CNOT1-204ENST00000563130 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.08□□□□□ -1.12
CNOT1-204ENST00000563130 A1BGP04217 495 aa8.08□□□□□ -1.12
CNOT1-204ENST00000563130 IL6STP40189 918 aaPredicted RBP8.08□□□□□ -1.12
CNOT1-204ENST00000563130 C4AP0C0L4 1744 aa8.07□□□□□ -1.12
CNOT1-204ENST00000563130 USP42Q9H9J4 1324 aaKnown RBP8.07□□□□□ -1.12
CNOT1-204ENST00000563130 COL15A1P39059 1388 aa8.07□□□□□ -1.12
CNOT1-204ENST00000563130 NBPF26B4DH59 902 aa8.07□□□□□ -1.12
CNOT1-204ENST00000563130 GNAI1P63096 354 aa8.07□□□□□ -1.12
CNOT1-204ENST00000563130 NBPF10Q6P3W6 841 aaKnown RBP8.07□□□□□ -1.12
CNOT1-204ENST00000563130 NBPF15Q8N660 670 aa8.07□□□□□ -1.12
CNOT1-204ENST00000563130 L3MBTL3Q96JM7 780 aaPredicted RBP8.07□□□□□ -1.12
CNOT1-204ENST00000563130 MBIPQ9NS73 344 aa8.07□□□□□ -1.12
CNOT1-204ENST00000563130 SENP3-EIF4A1A0A087X0R7 540 aa8.06□□□□□ -1.12
CNOT1-204ENST00000563130 GYS1P13807 737 aa8.06□□□□□ -1.12
CNOT1-204ENST00000563130 CANXP27824 592 aaKnown RBP8.06□□□□□ -1.12
CNOT1-204ENST00000563130 RFC4P35249 363 aa8.06□□□□□ -1.12
CNOT1-204ENST00000563130 NARFQ9UHQ1 456 aa8.06□□□□□ -1.12
CNOT1-204ENST00000563130 LAMB4A4D0S4 1761 aa8.06□□□□□ -1.12
CNOT1-204ENST00000563130 IL16Q14005 1332 aa8.06□□□□□ -1.12
CNOT1-204ENST00000563130 ZNF521Q96K83 1311 aa8.06□□□□□ -1.12
CNOT1-204ENST00000563130 TULP1O00294 542 aaPredicted RBP8.06□□□□□ -1.12
CNOT1-204ENST00000563130 WDR63Q8IWG1 891 aa8.06□□□□□ -1.12
CNOT1-204ENST00000563130 NLGN1Q8N2Q7 840 aa8.06□□□□□ -1.12
CNOT1-204ENST00000563130 MS4A4AQ96JQ5 239 aa8.06□□□□□ -1.12
CNOT1-204ENST00000563130 LAS1LQ9Y4W2 734 aaKnown RBP8.06□□□□□ -1.12
CNOT1-204ENST00000563130 HOXB7P09629 217 aa8.05□□□□□ -1.12
CNOT1-204ENST00000563130 KRT24Q2M2I5 525 aa8.05□□□□□ -1.12
CNOT1-204ENST00000563130 MSL1Q68DK7 614 aa8.05□□□□□ -1.12
CNOT1-204ENST00000563130 BCL2L12Q9HB09 334 aa8.05□□□□□ -1.12
CNOT1-204ENST00000563130 SRP68Q9UHB9 627 aaKnown RBP8.05□□□□□ -1.12
CNOT1-204ENST00000563130 ERBB4Q15303 1308 aa8.05□□□□□ -1.12
CNOT1-204ENST00000563130 G3V3G9 751 aa8.05□□□□□ -1.12
CNOT1-204ENST00000563130 POLD1P28340 1107 aa8.05□□□□□ -1.12
CNOT1-204ENST00000563130 PIP4K2AP48426 406 aaPredicted RBP8.05□□□□□ -1.12
CNOT1-204ENST00000563130 PDIA6Q15084 440 aa8.05□□□□□ -1.12
CNOT1-204ENST00000563130 LHX8Q68G74 356 aa8.05□□□□□ -1.12
CNOT1-204ENST00000563130 LRP10Q7Z4F1 713 aa8.05□□□□□ -1.12
CNOT1-204ENST00000563130 A0A087WZG4 1122 aa8.04□□□□□ -1.12
CNOT1-204ENST00000563130 USPL1Q5W0Q7 1092 aa8.04□□□□□ -1.12
CNOT1-204ENST00000563130 DPY19L2Q6NUT2 758 aa8.04□□□□□ -1.12
CNOT1-204ENST00000563130 ZPR1O75312 459 aa8.04□□□□□ -1.12
CNOT1-204ENST00000563130 TM4SF1P30408 202 aa8.04□□□□□ -1.12
CNOT1-204ENST00000563130 SALL2Q9Y467 1007 aaPredicted RBP8.04□□□□□ -1.12
CNOT1-204ENST00000563130 CAMTA2O94983 1202 aa8.03□□□□□ -1.12
CNOT1-204ENST00000563130 MMP10P09238 476 aa8.03□□□□□ -1.12
CNOT1-204ENST00000563130 DUSP27Q5VZP5 1158 aa8.03□□□□□ -1.12
CNOT1-204ENST00000563130 MAMSTRQ6ZN01 415 aa8.03□□□□□ -1.12
CNOT1-204ENST00000563130 SYT17Q9BSW7 474 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms