RNA–Protein interactions for RNA: ENST00000562785.1

CHD9-205, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-205ENST00000562785 DCTN4Q9UJW0 460 aa9.6□□□□□ -0.87
CHD9-205ENST00000562785 DNMT3LQ9UJW3 386 aa9.6□□□□□ -0.87
CHD9-205ENST00000562785 FIGNL2A6NMB9 653 aa9.59□□□□□ -0.87
CHD9-205ENST00000562785 HIF1AQ16665 826 aa9.59□□□□□ -0.87
CHD9-205ENST00000562785 ETFBKMTQ8IXQ9 262 aa9.59□□□□□ -0.87
CHD9-205ENST00000562785 TIMMDC1Q9NPL8 285 aa9.59□□□□□ -0.87
CHD9-205ENST00000562785 MAPK1P28482 360 aa9.58□□□□□ -0.88
CHD9-205ENST00000562785 IFT43Q96FT9 208 aa9.58□□□□□ -0.88
CHD9-205ENST00000562785 ZBTB39O15060 712 aa9.57□□□□□ -0.88
CHD9-205ENST00000562785 MSX1P28360 303 aa9.57□□□□□ -0.88
CHD9-205ENST00000562785 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.57□□□□□ -0.88
CHD9-205ENST00000562785 BCS1LQ9Y276 419 aa9.57□□□□□ -0.88
CHD9-205ENST00000562785 TGFBR3LH3BV60 316 aa9.56□□□□□ -0.88
CHD9-205ENST00000562785 FZD6O60353 706 aa9.56□□□□□ -0.88
CHD9-205ENST00000562785 IER5Q5VY09 327 aa9.56□□□□□ -0.88
CHD9-205ENST00000562785 FOXD4L4Q8WXT5 416 aaPredicted RBP9.56□□□□□ -0.88
CHD9-205ENST00000562785 KLRG1Q96E93 195 aa9.56□□□□□ -0.88
CHD9-205ENST00000562785 ASB16Q96NS5 453 aa9.56□□□□□ -0.88
CHD9-205ENST00000562785 AMOTL2Q9Y2J4 779 aa9.56□□□□□ -0.88
CHD9-205ENST00000562785 DYRK1BQ9Y463 629 aa9.56□□□□□ -0.88
CHD9-205ENST00000562785 NDUFB5O43674 189 aa9.55□□□□□ -0.88
CHD9-205ENST00000562785 RGL4Q8IZJ4 473 aa9.55□□□□□ -0.88
CHD9-205ENST00000562785 SUSD3Q96L08 255 aa9.55□□□□□ -0.88
CHD9-205ENST00000562785 ZIC5Q96T25 663 aa9.55□□□□□ -0.88
CHD9-205ENST00000562785 RBCK1Q9BYM8 510 aa9.55□□□□□ -0.88
CHD9-205ENST00000562785 IRX2Q9BZI1 471 aaPredicted RBP9.55□□□□□ -0.88
CHD9-205ENST00000562785 DACH1Q9UI36 760 aa9.55□□□□□ -0.88
CHD9-205ENST00000562785 ZCCHC6Q5VYS8 1495 aaKnown RBP9.54□□□□□ -0.88
CHD9-205ENST00000562785 MAN1A2O60476 641 aa9.54□□□□□ -0.88
CHD9-205ENST00000562785 ZAP70P43403 619 aa9.54□□□□□ -0.88
CHD9-205ENST00000562785 BICDL1Q6ZP65 573 aa9.54□□□□□ -0.88
CHD9-205ENST00000562785 ATCAYQ86WG3 371 aa9.54□□□□□ -0.88
CHD9-205ENST00000562785 TREML1Q86YW5 311 aa9.54□□□□□ -0.88
CHD9-205ENST00000562785 CITED4Q96RK1 184 aa9.54□□□□□ -0.88
CHD9-205ENST00000562785 CRISPLD1Q9H336 500 aa9.54□□□□□ -0.88
CHD9-205ENST00000562785 BRPF3Q9ULD4 1205 aa9.54□□□□□ -0.88
CHD9-205ENST00000562785 SENP3-EIF4A1A0A087X0R7 540 aa9.53□□□□□ -0.88
CHD9-205ENST00000562785 ANKRD33BA6NCL7 494 aa9.53□□□□□ -0.88
CHD9-205ENST00000562785 NPAS4Q8IUM7 802 aa9.53□□□□□ -0.88
CHD9-205ENST00000562785 ZSCAN29Q8IWY8 852 aaPredicted RBP9.53□□□□□ -0.88
CHD9-205ENST00000562785 ZNF280CQ8ND82 737 aa9.53□□□□□ -0.88
CHD9-205ENST00000562785 HSH2DQ96JZ2 352 aa9.53□□□□□ -0.88
CHD9-205ENST00000562785 CCDC87Q9NVE4 849 aa9.53□□□□□ -0.88
CHD9-205ENST00000562785 ANKIB1Q9P2G1 1089 aa9.53□□□□□ -0.88
CHD9-205ENST00000562785 DMGDHQ9UI17 866 aaKnown RBP9.53□□□□□ -0.88
CHD9-205ENST00000562785 MICAL2O94851 1124 aa9.52□□□□□ -0.89
CHD9-205ENST00000562785 F11P03951 625 aa9.52□□□□□ -0.89
CHD9-205ENST00000562785 AAMPQ13685 434 aa9.52□□□□□ -0.89
CHD9-205ENST00000562785 ARSJQ5FYB0 599 aaPredicted RBP9.52□□□□□ -0.89
CHD9-205ENST00000562785 SENP2Q9HC62 589 aa9.52□□□□□ -0.89
CHD9-205ENST00000562785 A0A1W2PNR3 127 aa9.51□□□□□ -0.89
CHD9-205ENST00000562785 MZF1P28698 734 aaPredicted RBP9.51□□□□□ -0.89
CHD9-205ENST00000562785 KIFC2Q96AC6 838 aa9.51□□□□□ -0.89
CHD9-205ENST00000562785 GPAMQ9HCL2 828 aa9.51□□□□□ -0.89
CHD9-205ENST00000562785 TMC7Q7Z402 723 aa9.5□□□□□ -0.89
CHD9-205ENST00000562785 EDEM1Q92611 657 aa9.5□□□□□ -0.89
CHD9-205ENST00000562785 FAM129BQ96TA1 746 aa9.5□□□□□ -0.89
CHD9-205ENST00000562785 RUBCNLQ9H714 662 aa9.5□□□□□ -0.89
CHD9-205ENST00000562785 FAM13BQ9NYF5 915 aa9.5□□□□□ -0.89
CHD9-205ENST00000562785 SOBPA7XYQ1 873 aa9.49□□□□□ -0.89
CHD9-205ENST00000562785 IGHA2P01877 340 aa9.49□□□□□ -0.89
CHD9-205ENST00000562785 PDGFAP04085 211 aa9.49□□□□□ -0.89
CHD9-205ENST00000562785 USP5P45974 858 aa9.49□□□□□ -0.89
CHD9-205ENST00000562785 IDH3AP50213 366 aa9.49□□□□□ -0.89
CHD9-205ENST00000562785 LRRC69Q6ZNQ3 347 aa9.49□□□□□ -0.89
CHD9-205ENST00000562785 BTLAQ7Z6A9 289 aa9.49□□□□□ -0.89
CHD9-205ENST00000562785 NPM2Q86SE8 214 aaKnown RBP9.49□□□□□ -0.89
CHD9-205ENST00000562785 NLRP8Q86W28 1048 aa9.49□□□□□ -0.89
CHD9-205ENST00000562785 GJD3Q8N144 294 aa9.49□□□□□ -0.89
CHD9-205ENST00000562785 TRIM47Q96LD4 638 aa9.49□□□□□ -0.89
CHD9-205ENST00000562785 NEUROD4Q9HD90 331 aa9.49□□□□□ -0.89
CHD9-205ENST00000562785 POLIQ9UNA4 740 aa9.49□□□□□ -0.89
CHD9-205ENST00000562785 SLC35F4A4IF30 521 aa9.48□□□□□ -0.89
CHD9-205ENST00000562785 OPLAHO14841 1288 aa9.48□□□□□ -0.89
CHD9-205ENST00000562785 PTSQ03393 145 aa9.48□□□□□ -0.89
CHD9-205ENST00000562785 DNM1Q05193 864 aaKnown RBP9.48□□□□□ -0.89
CHD9-205ENST00000562785 PDE3BQ13370 1112 aa9.48□□□□□ -0.89
CHD9-205ENST00000562785 LBRQ14739 615 aaKnown RBP9.48□□□□□ -0.89
CHD9-205ENST00000562785 COL19A1Q14993 1142 aa9.48□□□□□ -0.89
CHD9-205ENST00000562785 SAMD5Q5TGI4 173 aa9.48□□□□□ -0.89
CHD9-205ENST00000562785 PGBD3Q8N328 593 aa9.48□□□□□ -0.89
CHD9-205ENST00000562785 DMRTB1Q96MA1 342 aa9.48□□□□□ -0.89
CHD9-205ENST00000562785 GAS2L1Q99501 681 aaPredicted RBP9.48□□□□□ -0.89
CHD9-205ENST00000562785 RBM47A0AV96 593 aaKnown RBP9.47□□□□□ -0.89
CHD9-205ENST00000562785 INPP5BP32019 993 aa9.47□□□□□ -0.89
CHD9-205ENST00000562785 ARSDP51689 593 aa9.47□□□□□ -0.89
CHD9-205ENST00000562785 TYRO3Q06418 890 aa9.47□□□□□ -0.89
CHD9-205ENST00000562785 GPR152Q8TDT2 470 aa9.47□□□□□ -0.89
CHD9-205ENST00000562785 TREHO43280 583 aa9.46□□□□□ -0.9
CHD9-205ENST00000562785 EFHC2Q5JST6 749 aa9.46□□□□□ -0.9
CHD9-205ENST00000562785 ALKBH8Q96BT7 664 aaKnown RBP9.46□□□□□ -0.9
CHD9-205ENST00000562785 NUDT16Q96DE0 195 aaKnown RBP9.46□□□□□ -0.9
CHD9-205ENST00000562785 GJA3Q9Y6H8 435 aa9.46□□□□□ -0.9
CHD9-205ENST00000562785 DCAF1Q9Y4B6 1507 aa9.46□□□□□ -0.9
CHD9-205ENST00000562785 GPR182O15218 404 aa9.45□□□□□ -0.9
CHD9-205ENST00000562785 RPLP1P05386 114 aaKnown RBP9.45□□□□□ -0.9
CHD9-205ENST00000562785 THBS1P07996 1170 aa9.45□□□□□ -0.9
CHD9-205ENST00000562785 PCSK2P16519 638 aa9.45□□□□□ -0.9
CHD9-205ENST00000562785 FBXO33Q7Z6M2 555 aa9.45□□□□□ -0.9
CHD9-205ENST00000562785 PIK3R5Q8WYR1 880 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms