RNA–Protein interactions for RNA: ENST00000562706.5

TMX3-204, Transcript of thioredoxin related transmembrane protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMX3, Length 937 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMX3-204ENST00000562706 ZDHHC16Q969W1 377 aa10.82□□□□□ -0.68
TMX3-204ENST00000562706 KCTD12Q96CX2 325 aaKnown RBP10.82□□□□□ -0.68
TMX3-204ENST00000562706 PKD1L2Q7Z442 2459 aa10.81□□□□□ -0.68
TMX3-204ENST00000562706 LDHDQ86WU2 507 aa10.81□□□□□ -0.68
TMX3-204ENST00000562706 SLC4A5Q9BY07 1137 aa10.81□□□□□ -0.68
TMX3-204ENST00000562706 CCNL1Q9UK58 526 aaPredicted RBP10.81□□□□□ -0.68
TMX3-204ENST00000562706 USP54Q70EL1 1684 aa10.81□□□□□ -0.68
TMX3-204ENST00000562706 NBR1Q14596 966 aa10.8□□□□□ -0.68
TMX3-204ENST00000562706 L3MBTL2Q969R5 705 aa10.8□□□□□ -0.68
TMX3-204ENST00000562706 ERBB4Q15303 1308 aa10.8□□□□□ -0.68
TMX3-204ENST00000562706 CACNA1GO43497 2377 aa10.79□□□□□ -0.68
TMX3-204ENST00000562706 LMNB1P20700 586 aa10.79□□□□□ -0.68
TMX3-204ENST00000562706 AMIGO3Q86WK7 504 aa10.79□□□□□ -0.68
TMX3-204ENST00000562706 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.79□□□□□ -0.68
TMX3-204ENST00000562706 CCDC24Q8N4L8 307 aa10.79□□□□□ -0.68
TMX3-204ENST00000562706 STAC3Q96MF2 364 aa10.79□□□□□ -0.68
TMX3-204ENST00000562706 ZBED2Q9BTP6 218 aa10.79□□□□□ -0.68
TMX3-204ENST00000562706 TTC28Q96AY4 2481 aa10.79□□□□□ -0.68
TMX3-204ENST00000562706 MINK1Q8N4C8 1332 aaPredicted RBP10.79□□□□□ -0.68
TMX3-204ENST00000562706 PIEZO1Q92508 2521 aa10.78□□□□□ -0.68
TMX3-204ENST00000562706 PIM2Q9P1W9 311 aa10.78□□□□□ -0.68
TMX3-204ENST00000562706 LY75O60449 1722 aa10.78□□□□□ -0.68
TMX3-204ENST00000562706 CAMK2BQ13554 666 aa10.77□□□□□ -0.69
TMX3-204ENST00000562706 DALRD3Q5D0E6 543 aaKnown RBP10.77□□□□□ -0.69
TMX3-204ENST00000562706 PLA2G2EQ9NZK7 142 aa10.77□□□□□ -0.69
TMX3-204ENST00000562706 PCDHGA10Q9Y5H3 936 aa10.77□□□□□ -0.69
TMX3-204ENST00000562706 BRCA2P51587 3418 aa10.77□□□□□ -0.69
TMX3-204ENST00000562706 ANKARQ7Z5J8 1434 aa10.76□□□□□ -0.69
TMX3-204ENST00000562706 MMP10P09238 476 aa10.76□□□□□ -0.69
TMX3-204ENST00000562706 BRPF1P55201 1214 aaPredicted RBP10.76□□□□□ -0.69
TMX3-204ENST00000562706 WDR17Q8IZU2 1322 aa10.76□□□□□ -0.69
TMX3-204ENST00000562706 ABCC11Q96J66 1382 aa10.76□□□□□ -0.69
TMX3-204ENST00000562706 TIAM2Q8IVF5 1701 aa10.75□□□□□ -0.69
TMX3-204ENST00000562706 ZBTB7CA1YPR0 619 aa10.75□□□□□ -0.69
TMX3-204ENST00000562706 BHMG1C9JSJ3 638 aaPredicted RBP10.75□□□□□ -0.69
TMX3-204ENST00000562706 CTU1Q7Z7A3 348 aaKnown RBP10.75□□□□□ -0.69
TMX3-204ENST00000562706 NGDNQ8NEJ9 315 aaKnown RBP10.75□□□□□ -0.69
TMX3-204ENST00000562706 RBM27Q9P2N5 1060 aaKnown RBP10.75□□□□□ -0.69
TMX3-204ENST00000562706 ITSN1Q15811 1721 aa10.75□□□□□ -0.69
TMX3-204ENST00000562706 DDX10Q13206 875 aaKnown RBP10.74□□□□□ -0.69
TMX3-204ENST00000562706 CIAPIN1Q6FI81 312 aa10.74□□□□□ -0.69
TMX3-204ENST00000562706 NUP155O75694 1391 aa10.74□□□□□ -0.69
TMX3-204ENST00000562706 PHF14O94880 888 aa10.73□□□□□ -0.69
TMX3-204ENST00000562706 GCP02774 474 aa10.73□□□□□ -0.69
TMX3-204ENST00000562706 HSPA5P11021 654 aaKnown RBP10.73□□□□□ -0.69
TMX3-204ENST00000562706 CNTROBQ8N137 903 aa10.73□□□□□ -0.69
TMX3-204ENST00000562706 CARD10Q9BWT7 1032 aa10.73□□□□□ -0.69
TMX3-204ENST00000562706 ABCC6O95255 1503 aa10.73□□□□□ -0.69
TMX3-204ENST00000562706 LAMB4A4D0S4 1761 aa10.72□□□□□ -0.69
TMX3-204ENST00000562706 DPYSL4O14531 572 aa10.72□□□□□ -0.69
TMX3-204ENST00000562706 PPEF1O14829 653 aaPredicted RBP10.72□□□□□ -0.69
TMX3-204ENST00000562706 DDNO94850 711 aaPredicted RBP10.72□□□□□ -0.69
TMX3-204ENST00000562706 PPP1R3GB7ZBB8 358 aa10.71□□□□□ -0.69
TMX3-204ENST00000562706 H0YGN5 161 aa10.71□□□□□ -0.69
TMX3-204ENST00000562706 TULP1O00294 542 aaPredicted RBP10.71□□□□□ -0.69
TMX3-204ENST00000562706 CCDC88AQ3V6T2 1871 aa10.71□□□□□ -0.69
TMX3-204ENST00000562706 SYNGAP1Q96PV0 1343 aa10.71□□□□□ -0.69
TMX3-204ENST00000562706 TAF1DQ9H5J8 278 aaPredicted RBP10.71□□□□□ -0.69
TMX3-204ENST00000562706 STXBP5LQ9Y2K9 1186 aa10.71□□□□□ -0.69
TMX3-204ENST00000562706 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.7□□□□□ -0.7
TMX3-204ENST00000562706 CCER2I3L3R5 266 aa10.7□□□□□ -0.7
TMX3-204ENST00000562706 EIF4G2P78344 907 aaKnown RBP eCLIP10.7□□□□□ -0.7
TMX3-204ENST00000562706 FMR1Q06787 632 aaKnown RBP eCLIP10.7□□□□□ -0.7
TMX3-204ENST00000562706 EAPPQ56P03 285 aaPredicted RBP10.7□□□□□ -0.7
TMX3-204ENST00000562706 MAP1SQ66K74 1059 aaPredicted RBP10.7□□□□□ -0.7
TMX3-204ENST00000562706 TMEM132EQ6IEE7 984 aa10.7□□□□□ -0.7
TMX3-204ENST00000562706 TYW1BQ6NUM6 668 aa10.7□□□□□ -0.7
TMX3-204ENST00000562706 SYTL4Q96C24 671 aaPredicted RBP10.7□□□□□ -0.7
TMX3-204ENST00000562706 DDX21Q9NR30 783 aaKnown RBP eCLIP10.7□□□□□ -0.7
TMX3-204ENST00000562706 WASHC2AQ641Q2 1341 aa10.69□□□□□ -0.7
TMX3-204ENST00000562706 PRIM1P49642 420 aaKnown RBP10.69□□□□□ -0.7
TMX3-204ENST00000562706 PTPN5P54829 565 aa10.69□□□□□ -0.7
TMX3-204ENST00000562706 THSD4Q6ZMP0 1018 aa10.69□□□□□ -0.7
TMX3-204ENST00000562706 MRPL50Q8N5N7 158 aaKnown RBP10.69□□□□□ -0.7
TMX3-204ENST00000562706 FBXW7Q969H0 707 aa10.69□□□□□ -0.7
TMX3-204ENST00000562706 LAMA3Q16787 3333 aa10.68□□□□□ -0.7
TMX3-204ENST00000562706 TOGARAM1Q9Y4F4 1720 aa10.68□□□□□ -0.7
TMX3-204ENST00000562706 SOX1O00570 391 aaPredicted RBP10.68□□□□□ -0.7
TMX3-204ENST00000562706 SAFB2Q14151 953 aaKnown RBP eCLIP10.68□□□□□ -0.7
TMX3-204ENST00000562706 PROX2Q3B8N5 592 aa10.68□□□□□ -0.7
TMX3-204ENST00000562706 COL26A1Q96A83 441 aa10.68□□□□□ -0.7
TMX3-204ENST00000562706 LRCH3Q96II8 777 aa10.68□□□□□ -0.7
TMX3-204ENST00000562706 YTHDC1Q96MU7 727 aaKnown RBP10.68□□□□□ -0.7
TMX3-204ENST00000562706 NBPF3Q9H094 633 aa10.68□□□□□ -0.7
TMX3-204ENST00000562706 GTF3C3Q9Y5Q9 886 aa10.68□□□□□ -0.7
TMX3-204ENST00000562706 C5P01031 1676 aa10.68□□□□□ -0.7
TMX3-204ENST00000562706 MUC3AQ02505 3323 aa10.68□□□□□ -0.7
TMX3-204ENST00000562706 PPIP5K1Q6PFW1 1433 aa10.67□□□□□ -0.7
TMX3-204ENST00000562706 MAP3K12Q12852 859 aa10.67□□□□□ -0.7
TMX3-204ENST00000562706 TLL2Q9Y6L7 1015 aa10.67□□□□□ -0.7
TMX3-204ENST00000562706 NSD2O96028 1365 aa10.66□□□□□ -0.7
TMX3-204ENST00000562706 IQCA1LA6NCM1 817 aa10.66□□□□□ -0.7
TMX3-204ENST00000562706 ABTB2Q8N961 1025 aa10.66□□□□□ -0.7
TMX3-204ENST00000562706 WNT2BQ93097 391 aa10.66□□□□□ -0.7
TMX3-204ENST00000562706 ZIC5Q96T25 663 aa10.66□□□□□ -0.7
TMX3-204ENST00000562706 CCDC87Q9NVE4 849 aa10.66□□□□□ -0.7
TMX3-204ENST00000562706 CCDC7Q96M83 1385 aa10.65□□□□□ -0.7
TMX3-204ENST00000562706 SLIT3O75094 1523 aa10.65□□□□□ -0.7
TMX3-204ENST00000562706 TMEM265A0A087WTH1 108 aa10.65□□□□□ -0.7
TMX3-204ENST00000562706 GOLGA8CPA6NN73 597 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms