RNA–Protein interactions for RNA: ENST00000562616.1

CCP110-206, Transcript of centriolar coiled-coil protein 110, humanhuman

TSL 3

Gene CCP110, Length 1,679 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-206ENST00000562616 BLMP54132 1417 aaPredicted RBP11.84□□□□□ -0.51
CCP110-206ENST00000562616 EP400Q96L91 3159 aa11.84□□□□□ -0.51
CCP110-206ENST00000562616 CPDO75976 1380 aa11.84□□□□□ -0.51
CCP110-206ENST00000562616 FAM83GA6ND36 823 aa11.84□□□□□ -0.51
CCP110-206ENST00000562616 BCL2L12Q9HB09 334 aa11.84□□□□□ -0.51
CCP110-206ENST00000562616 USP21Q9UK80 565 aa11.84□□□□□ -0.51
CCP110-206ENST00000562616 RGPD5Q99666 1765 aa11.83□□□□□ -0.52
CCP110-206ENST00000562616 NRAPQ86VF7 1730 aa11.83□□□□□ -0.52
CCP110-206ENST00000562616 NWD2Q9ULI1 1742 aa11.83□□□□□ -0.52
CCP110-206ENST00000562616 LMO7Q8WWI1 1683 aa11.83□□□□□ -0.52
CCP110-206ENST00000562616 GDPD2Q9HCC8 539 aa11.83□□□□□ -0.52
CCP110-206ENST00000562616 RRS1Q15050 365 aaKnown RBP11.82□□□□□ -0.52
CCP110-206ENST00000562616 TRAF7Q6Q0C0 670 aa11.82□□□□□ -0.52
CCP110-206ENST00000562616 NUDCQ9Y266 331 aa11.82□□□□□ -0.52
CCP110-206ENST00000562616 COL18A1P39060 1754 aa11.82□□□□□ -0.52
CCP110-206ENST00000562616 SLIT2O94813 1529 aa11.82□□□□□ -0.52
CCP110-206ENST00000562616 SMG6Q86US8 1419 aaKnown RBP11.82□□□□□ -0.52
CCP110-206ENST00000562616 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.82□□□□□ -0.52
CCP110-206ENST00000562616 PPM1GO15355 546 aaPredicted RBP11.81□□□□□ -0.52
CCP110-206ENST00000562616 ARHGEF25Q86VW2 580 aa11.81□□□□□ -0.52
CCP110-206ENST00000562616 BTG4Q9NY30 223 aa11.81□□□□□ -0.52
CCP110-206ENST00000562616 TRPC5Q9UL62 973 aaPredicted RBP11.81□□□□□ -0.52
CCP110-206ENST00000562616 EMILIN1Q9Y6C2 1016 aa11.81□□□□□ -0.52
CCP110-206ENST00000562616 MAP2P11137 1827 aaKnown RBP11.81□□□□□ -0.52
CCP110-206ENST00000562616 COL3A1P02461 1466 aaPredicted RBP11.81□□□□□ -0.52
CCP110-206ENST00000562616 PEAK1Q9H792 1746 aa11.81□□□□□ -0.52
CCP110-206ENST00000562616 CAMTA1Q9Y6Y1 1673 aa11.81□□□□□ -0.52
CCP110-206ENST00000562616 MAP3K19Q56UN5 1328 aa11.81□□□□□ -0.52
CCP110-206ENST00000562616 DIAPH1O60610 1272 aaKnown RBP11.81□□□□□ -0.52
CCP110-206ENST00000562616 MTMR14Q8NCE2 650 aa11.8□□□□□ -0.52
CCP110-206ENST00000562616 PXYLP1Q8TE99 480 aa11.8□□□□□ -0.52
CCP110-206ENST00000562616 ZBED2Q9BTP6 218 aa11.8□□□□□ -0.52
CCP110-206ENST00000562616 STRN4Q9NRL3 753 aa11.8□□□□□ -0.52
CCP110-206ENST00000562616 BCL9LQ86UU0 1499 aa11.8□□□□□ -0.52
CCP110-206ENST00000562616 AMPHP49418 695 aa11.79□□□□□ -0.52
CCP110-206ENST00000562616 TYW1BQ6NUM6 668 aa11.79□□□□□ -0.52
CCP110-206ENST00000562616 ZNF454Q8N9F8 522 aa11.79□□□□□ -0.52
CCP110-206ENST00000562616 GLMNQ92990 594 aa11.79□□□□□ -0.52
CCP110-206ENST00000562616 NBPF3Q9H094 633 aa11.79□□□□□ -0.52
CCP110-206ENST00000562616 ATRNO75882 1429 aa11.79□□□□□ -0.52
CCP110-206ENST00000562616 ABCC6O95255 1503 aa11.79□□□□□ -0.52
CCP110-206ENST00000562616 COL5A2P05997 1499 aaPredicted RBP11.78□□□□□ -0.52
CCP110-206ENST00000562616 LCE2BO14633 110 aa11.78□□□□□ -0.52
CCP110-206ENST00000562616 U2AF1L5P0DN76 240 aaPredicted RBP11.78□□□□□ -0.52
CCP110-206ENST00000562616 PTPREP23469 700 aa11.78□□□□□ -0.52
CCP110-206ENST00000562616 ABL2P42684 1182 aa11.78□□□□□ -0.52
CCP110-206ENST00000562616 U2AF1Q01081 240 aaKnown RBP eCLIP11.78□□□□□ -0.52
CCP110-206ENST00000562616 KCNA1Q09470 495 aa11.78□□□□□ -0.52
CCP110-206ENST00000562616 TUSC1Q2TAM9 212 aa11.78□□□□□ -0.52
CCP110-206ENST00000562616 UNC5CLQ8IV45 518 aa11.78□□□□□ -0.52
CCP110-206ENST00000562616 SENP3-EIF4A1A0A087X0R7 540 aa11.78□□□□□ -0.52
CCP110-206ENST00000562616 U2SURPO15042 1029 aaKnown RBP11.78□□□□□ -0.52
CCP110-206ENST00000562616 EVA1CP58658 441 aa11.78□□□□□ -0.52
CCP110-206ENST00000562616 TSR1Q2NL82 804 aaKnown RBP11.78□□□□□ -0.52
CCP110-206ENST00000562616 RIC3Q7Z5B4 369 aa11.78□□□□□ -0.52
CCP110-206ENST00000562616 CCDC146Q8IYE0 955 aa11.78□□□□□ -0.52
CCP110-206ENST00000562616 RBM25P49756 843 aaKnown RBP11.77□□□□□ -0.53
CCP110-206ENST00000562616 RUNDC1Q96C34 613 aa11.77□□□□□ -0.53
CCP110-206ENST00000562616 LTV1Q96GA3 475 aaPredicted RBP11.77□□□□□ -0.53
CCP110-206ENST00000562616 ADGRG1Q9Y653 693 aa11.77□□□□□ -0.53
CCP110-206ENST00000562616 RTL1A6NKG5 1358 aa11.77□□□□□ -0.53
CCP110-206ENST00000562616 CSB-PGBD3P0DP91 1061 aa11.76□□□□□ -0.53
CCP110-206ENST00000562616 HOXC9P31274 260 aa11.76□□□□□ -0.53
CCP110-206ENST00000562616 IL13P35225 146 aa11.76□□□□□ -0.53
CCP110-206ENST00000562616 FAM161AQ3B820 660 aa11.76□□□□□ -0.53
CCP110-206ENST00000562616 CCDC125Q86Z20 511 aa11.76□□□□□ -0.53
CCP110-206ENST00000562616 NGEFQ8N5V2 710 aa11.76□□□□□ -0.53
CCP110-206ENST00000562616 NLRP7Q8WX94 980 aa11.76□□□□□ -0.53
CCP110-206ENST00000562616 IP6K1Q92551 441 aa11.76□□□□□ -0.53
CCP110-206ENST00000562616 PBXIP1Q96AQ6 731 aa11.76□□□□□ -0.53
CCP110-206ENST00000562616 LIMD1Q9UGP4 676 aa11.76□□□□□ -0.53
CCP110-206ENST00000562616 USTQ9Y2C2 406 aa11.76□□□□□ -0.53
CCP110-206ENST00000562616 SALL2Q9Y467 1007 aaPredicted RBP11.76□□□□□ -0.53
CCP110-206ENST00000562616 APAF1O14727 1248 aa11.75□□□□□ -0.53
CCP110-206ENST00000562616 BRD1O95696 1058 aa11.75□□□□□ -0.53
CCP110-206ENST00000562616 LARP1Q6PKG0 1096 aaKnown RBP11.75□□□□□ -0.53
CCP110-206ENST00000562616 PCDHGA10Q9Y5H3 936 aa11.75□□□□□ -0.53
CCP110-206ENST00000562616 FLT4P35916 1363 aa11.75□□□□□ -0.53
CCP110-206ENST00000562616 PDE3BQ13370 1112 aa11.75□□□□□ -0.53
CCP110-206ENST00000562616 FOXD4L5Q5VV16 416 aaPredicted RBP11.75□□□□□ -0.53
CCP110-206ENST00000562616 ANKRD24Q8TF21 1146 aa11.75□□□□□ -0.53
CCP110-206ENST00000562616 FOXD4L4Q8WXT5 416 aaPredicted RBP11.75□□□□□ -0.53
CCP110-206ENST00000562616 GJD4Q96KN9 370 aaPredicted RBP11.75□□□□□ -0.53
CCP110-206ENST00000562616 PNNQ9H307 717 aaKnown RBP11.75□□□□□ -0.53
CCP110-206ENST00000562616 KIF24Q5T7B8 1368 aa11.75□□□□□ -0.53
CCP110-206ENST00000562616 GLI3P10071 1580 aa11.74□□□□□ -0.53
CCP110-206ENST00000562616 RGPD2P0DJD1 1756 aa11.74□□□□□ -0.53
CCP110-206ENST00000562616 FAM208AQ9UK61 1670 aaKnown RBP11.74□□□□□ -0.53
CCP110-206ENST00000562616 VPS72Q15906 364 aa11.74□□□□□ -0.53
CCP110-206ENST00000562616 HSP90AB2PQ58FF8 381 aa11.74□□□□□ -0.53
CCP110-206ENST00000562616 PADI6Q6TGC4 694 aa11.74□□□□□ -0.53
CCP110-206ENST00000562616 TOM1L2Q6ZVM7 507 aa11.74□□□□□ -0.53
CCP110-206ENST00000562616 USP35Q9P2H5 1018 aa11.74□□□□□ -0.53
CCP110-206ENST00000562616 RBM27Q9P2N5 1060 aaKnown RBP11.74□□□□□ -0.53
CCP110-206ENST00000562616 WDR17Q8IZU2 1322 aa11.73□□□□□ -0.53
CCP110-206ENST00000562616 GFRA3O60609 400 aa11.73□□□□□ -0.53
CCP110-206ENST00000562616 EIF4A2Q14240 407 aaKnown RBP11.73□□□□□ -0.53
CCP110-206ENST00000562616 CRB1P82279 1406 aa11.73□□□□□ -0.53
CCP110-206ENST00000562616 TCP11L2Q8N4U5 519 aa11.72□□□□□ -0.53
CCP110-206ENST00000562616 PLEKHF1Q96S99 279 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms