RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 SETDB2Q96T68 719 aa20.98■□□□□ 0.95
COMMD4-206ENST00000562610 NPHP1O15259 732 aa20.97■□□□□ 0.95
COMMD4-206ENST00000562610 DPEP1P16444 411 aa20.97■□□□□ 0.95
COMMD4-206ENST00000562610 YY1P25490 414 aa20.97■□□□□ 0.95
COMMD4-206ENST00000562610 ZNF853P0CG23 659 aa20.96■□□□□ 0.95
COMMD4-206ENST00000562610 CCDC27Q2M243 656 aa20.96■□□□□ 0.95
COMMD4-206ENST00000562610 CLEC4GQ6UXB4 293 aa20.96■□□□□ 0.95
COMMD4-206ENST00000562610 SALL2Q9Y467 1007 aaPredicted RBP20.96■□□□□ 0.95
COMMD4-206ENST00000562610 ARFGEF2Q9Y6D5 1785 aa20.95■□□□□ 0.94
COMMD4-206ENST00000562610 GRIN3BO60391 1043 aa20.95■□□□□ 0.94
COMMD4-206ENST00000562610 ANXA1P04083 346 aa20.95■□□□□ 0.94
COMMD4-206ENST00000562610 HDGFL1Q5TGJ6 251 aa20.95■□□□□ 0.94
COMMD4-206ENST00000562610 TTLL7Q6ZT98 887 aa20.95■□□□□ 0.94
COMMD4-206ENST00000562610 WWC1Q8IX03 1113 aa20.95■□□□□ 0.94
COMMD4-206ENST00000562610 ZBTB3Q9H5J0 574 aa20.95■□□□□ 0.94
COMMD4-206ENST00000562610 MAP3K15Q6ZN16 1313 aa20.95■□□□□ 0.94
COMMD4-206ENST00000562610 HOXB7P09629 217 aa20.94■□□□□ 0.94
COMMD4-206ENST00000562610 HLFQ16534 295 aa20.94■□□□□ 0.94
COMMD4-206ENST00000562610 PROSER3Q2NL68 480 aa20.94■□□□□ 0.94
COMMD4-206ENST00000562610 CNBD1Q8NA66 436 aa20.94■□□□□ 0.94
COMMD4-206ENST00000562610 NIP7Q9Y221 180 aaKnown RBP eCLIP20.94■□□□□ 0.94
COMMD4-206ENST00000562610 BCS1LQ9Y276 419 aa20.94■□□□□ 0.94
COMMD4-206ENST00000562610 CHRNA5P30532 468 aa20.93■□□□□ 0.94
COMMD4-206ENST00000562610 PDIA6Q15084 440 aa20.93■□□□□ 0.94
COMMD4-206ENST00000562610 DUSP27Q5VZP5 1158 aa20.93■□□□□ 0.94
COMMD4-206ENST00000562610 PRR5LQ6MZQ0 368 aa20.93■□□□□ 0.94
COMMD4-206ENST00000562610 RGL2O15211 777 aa20.92■□□□□ 0.94
COMMD4-206ENST00000562610 ST5P78524 1137 aa20.92■□□□□ 0.94
COMMD4-206ENST00000562610 NBPF5PQ86XG9 351 aaPredicted RBP20.92■□□□□ 0.94
COMMD4-206ENST00000562610 CCDC24Q8N4L8 307 aa20.92■□□□□ 0.94
COMMD4-206ENST00000562610 CHPF2Q9P2E5 772 aa20.92■□□□□ 0.94
COMMD4-206ENST00000562610 ATP10DQ9P241 1426 aa20.92■□□□□ 0.94
COMMD4-206ENST00000562610 TNRC6CQ9HCJ0 1690 aaKnown RBP20.92■□□□□ 0.94
COMMD4-206ENST00000562610 ERVV-1B6SEH8 477 aa20.91■□□□□ 0.94
COMMD4-206ENST00000562610 TSR2Q969E8 191 aaKnown RBP20.91■□□□□ 0.94
COMMD4-206ENST00000562610 PIM2Q9P1W9 311 aa20.91■□□□□ 0.94
COMMD4-206ENST00000562610 FAM177BA6PVY3 158 aa20.9■□□□□ 0.94
COMMD4-206ENST00000562610 ELL2O00472 640 aaPredicted RBP20.9■□□□□ 0.94
COMMD4-206ENST00000562610 AIMP1Q12904 312 aaKnown RBP20.9■□□□□ 0.94
COMMD4-206ENST00000562610 LRP10Q7Z4F1 713 aa20.9■□□□□ 0.94
COMMD4-206ENST00000562610 DDX21Q9NR30 783 aaKnown RBP eCLIP20.9■□□□□ 0.94
COMMD4-206ENST00000562610 KCNA3P22001 575 aa20.89■□□□□ 0.93
COMMD4-206ENST00000562610 NCBP3Q53F19 620 aaKnown RBP20.89■□□□□ 0.93
COMMD4-206ENST00000562610 C2CD5Q86YS7 1000 aa20.89■□□□□ 0.93
COMMD4-206ENST00000562610 XAGE3Q8WTP9 111 aa20.89■□□□□ 0.93
COMMD4-206ENST00000562610 IL16Q14005 1332 aa20.88■□□□□ 0.93
COMMD4-206ENST00000562610 GPTP24298 496 aa20.88■□□□□ 0.93
COMMD4-206ENST00000562610 DBF4Q9UBU7 674 aaPredicted RBP20.88■□□□□ 0.93
COMMD4-206ENST00000562610 CACNA1FO60840 1977 aa20.88■□□□□ 0.93
COMMD4-206ENST00000562610 H0YIN7 160 aa20.87■□□□□ 0.93
COMMD4-206ENST00000562610 PDE6BP35913 854 aa20.87■□□□□ 0.93
COMMD4-206ENST00000562610 DALRD3Q5D0E6 543 aaKnown RBP20.87■□□□□ 0.93
COMMD4-206ENST00000562610 GIGYF2Q6Y7W6 1299 aaKnown RBP20.87■□□□□ 0.93
COMMD4-206ENST00000562610 COPS6Q7L5N1 327 aa20.87■□□□□ 0.93
COMMD4-206ENST00000562610 C8orf58Q8NAV2 365 aa20.87■□□□□ 0.93
COMMD4-206ENST00000562610 BRIP1Q9BX63 1249 aa20.87■□□□□ 0.93
COMMD4-206ENST00000562610 CCDC88AQ3V6T2 1871 aa20.87■□□□□ 0.93
COMMD4-206ENST00000562610 GTF2E1P29083 439 aaPredicted RBP20.86■□□□□ 0.93
COMMD4-206ENST00000562610 LAMB2P55268 1798 aa20.86■□□□□ 0.93
COMMD4-206ENST00000562610 SBF1O95248 1867 aa20.86■□□□□ 0.93
COMMD4-206ENST00000562610 UBN2Q6ZU65 1347 aa20.85■□□□□ 0.93
COMMD4-206ENST00000562610 CCER2I3L3R5 266 aa20.85■□□□□ 0.93
COMMD4-206ENST00000562610 TPTE2Q6XPS3 522 aa20.85■□□□□ 0.93
COMMD4-206ENST00000562610 FANCIQ9NVI1 1328 aa20.84■□□□□ 0.93
COMMD4-206ENST00000562610 SLX4Q8IY92 1834 aa20.84■□□□□ 0.93
COMMD4-206ENST00000562610 WDR63Q8IWG1 891 aa20.84■□□□□ 0.93
COMMD4-206ENST00000562610 NYXQ9GZU5 481 aa20.84■□□□□ 0.93
COMMD4-206ENST00000562610 HYPKQ9NX55 129 aa20.84■□□□□ 0.93
COMMD4-206ENST00000562610 IBTKQ9P2D0 1353 aaPredicted RBP20.84■□□□□ 0.93
COMMD4-206ENST00000562610 DIEXFQ68CQ4 756 aaKnown RBP20.83■□□□□ 0.93
COMMD4-206ENST00000562610 TSPYL6Q8N831 410 aa20.83■□□□□ 0.93
COMMD4-206ENST00000562610 ZNF622Q969S3 477 aaKnown RBP eCLIP20.83■□□□□ 0.93
COMMD4-206ENST00000562610 PDZRN3Q9UPQ7 1066 aa20.83■□□□□ 0.93
COMMD4-206ENST00000562610 ABCC12Q96J65 1359 aa20.83■□□□□ 0.92
COMMD4-206ENST00000562610 ARHGAP27Q6ZUM4 889 aa20.82■□□□□ 0.92
COMMD4-206ENST00000562610 NUTM1Q86Y26 1132 aa20.82■□□□□ 0.92
COMMD4-206ENST00000562610 ZNF34Q8IZ26 560 aa20.82■□□□□ 0.92
COMMD4-206ENST00000562610 FER1L6Q2WGJ9 1857 aa20.81■□□□□ 0.92
COMMD4-206ENST00000562610 TWISTNBQ3B726 338 aaPredicted RBP20.81■□□□□ 0.92
COMMD4-206ENST00000562610 HSP90AB3PQ58FF7 597 aa20.81■□□□□ 0.92
COMMD4-206ENST00000562610 CCDC30Q5VVM6 783 aa20.81■□□□□ 0.92
COMMD4-206ENST00000562610 TTLL6Q8N841 843 aa20.81■□□□□ 0.92
COMMD4-206ENST00000562610 DDX60Q8IY21 1712 aaKnown RBP20.81■□□□□ 0.92
COMMD4-206ENST00000562610 PARP10Q53GL7 1025 aa20.8■□□□□ 0.92
COMMD4-206ENST00000562610 CHMP4AQ9BY43 222 aa20.8■□□□□ 0.92
COMMD4-206ENST00000562610 TIAM2Q8IVF5 1701 aa20.8■□□□□ 0.92
COMMD4-206ENST00000562610 ERFEQ4G0M1 354 aa20.79■□□□□ 0.92
COMMD4-206ENST00000562610 SUSD4Q5VX71 490 aa20.79■□□□□ 0.92
COMMD4-206ENST00000562610 PPP1R42Q7Z4L9 355 aa20.79■□□□□ 0.92
COMMD4-206ENST00000562610 PLBD2Q8NHP8 589 aa20.79■□□□□ 0.92
COMMD4-206ENST00000562610 NTSR2O95665 410 aa20.78■□□□□ 0.92
COMMD4-206ENST00000562610 GOLGA2Q08379 1002 aa20.78■□□□□ 0.92
COMMD4-206ENST00000562610 ANKRD13DQ6ZTN6 518 aa20.78■□□□□ 0.92
COMMD4-206ENST00000562610 STK31Q9BXU1 1019 aa20.78■□□□□ 0.92
COMMD4-206ENST00000562610 MYH16Q9H6N6 1097 aa20.78■□□□□ 0.92
COMMD4-206ENST00000562610 PHAXQ9H814 394 aaKnown RBP20.78■□□□□ 0.92
COMMD4-206ENST00000562610 RIC1Q4ADV7 1423 aa20.78■□□□□ 0.92
COMMD4-206ENST00000562610 TCERG1O14776 1098 aaKnown RBP20.77■□□□□ 0.92
COMMD4-206ENST00000562610 SRGNP10124 158 aa20.77■□□□□ 0.92
COMMD4-206ENST00000562610 STYK1Q6J9G0 422 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms