RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 MYL6BP14649 208 aa23.28■■□□□ 1.32
CMTM3-204ENST00000562357 NIP7Q9Y221 180 aaKnown RBP eCLIP23.28■■□□□ 1.32
CMTM3-204ENST00000562357 TTLL6Q8N841 843 aa23.27■■□□□ 1.32
CMTM3-204ENST00000562357 BRCA1P38398 1863 aaKnown RBP23.26■■□□□ 1.31
CMTM3-204ENST00000562357 EIF2S2P20042 333 aaKnown RBP23.26■■□□□ 1.31
CMTM3-204ENST00000562357 GPBP1L1Q9HC44 474 aaPredicted RBP23.26■■□□□ 1.31
CMTM3-204ENST00000562357 TRIM35Q9UPQ4 493 aa23.26■■□□□ 1.31
CMTM3-204ENST00000562357 ADCY9O60503 1353 aa23.26■■□□□ 1.31
CMTM3-204ENST00000562357 ERVV-1B6SEH8 477 aa23.25■■□□□ 1.31
CMTM3-204ENST00000562357 CALD1Q05682 793 aaKnown RBP23.25■■□□□ 1.31
CMTM3-204ENST00000562357 TPTE2Q6XPS3 522 aa23.25■■□□□ 1.31
CMTM3-204ENST00000562357 ZNF622Q969S3 477 aaKnown RBP eCLIP23.25■■□□□ 1.31
CMTM3-204ENST00000562357 CHL1O00533 1208 aa23.24■■□□□ 1.31
CMTM3-204ENST00000562357 APAF1O14727 1248 aa23.24■■□□□ 1.31
CMTM3-204ENST00000562357 CCDC24Q8N4L8 307 aa23.24■■□□□ 1.31
CMTM3-204ENST00000562357 MAP3K15Q6ZN16 1313 aa23.24■■□□□ 1.31
CMTM3-204ENST00000562357 GTF2E1P29083 439 aaPredicted RBP23.23■■□□□ 1.31
CMTM3-204ENST00000562357 IFFO2Q5TF58 517 aa23.23■■□□□ 1.31
CMTM3-204ENST00000562357 ZNF526Q8TF50 670 aaPredicted RBP23.23■■□□□ 1.31
CMTM3-204ENST00000562357 ARFGEF1Q9Y6D6 1849 aa23.23■■□□□ 1.31
CMTM3-204ENST00000562357 HLFQ16534 295 aa23.22■■□□□ 1.31
CMTM3-204ENST00000562357 FAM177BA6PVY3 158 aa23.21■■□□□ 1.31
CMTM3-204ENST00000562357 CFAP44Q96MT7 982 aa23.21■■□□□ 1.31
CMTM3-204ENST00000562357 NYXQ9GZU5 481 aa23.21■■□□□ 1.31
CMTM3-204ENST00000562357 TTLL7Q6ZT98 887 aa23.2■■□□□ 1.3
CMTM3-204ENST00000562357 CNKSR1Q969H4 720 aa23.2■■□□□ 1.3
CMTM3-204ENST00000562357 ZBTB3Q9H5J0 574 aa23.2■■□□□ 1.3
CMTM3-204ENST00000562357 MRS2Q9HD23 443 aa23.2■■□□□ 1.3
CMTM3-204ENST00000562357 C9orf131Q5VYM1 1079 aa23.19■■□□□ 1.3
CMTM3-204ENST00000562357 DLEC1Q9Y238 1755 aa23.19■■□□□ 1.3
CMTM3-204ENST00000562357 HOXB7P09629 217 aa23.18■■□□□ 1.3
CMTM3-204ENST00000562357 STYK1Q6J9G0 422 aa23.18■■□□□ 1.3
CMTM3-204ENST00000562357 NECTIN2Q92692 538 aa23.18■■□□□ 1.3
CMTM3-204ENST00000562357 MASTLQ96GX5 879 aa23.18■■□□□ 1.3
CMTM3-204ENST00000562357 RNF181Q9P0P0 153 aa23.18■■□□□ 1.3
CMTM3-204ENST00000562357 C1QTNF8P60827 252 aa23.17■■□□□ 1.3
CMTM3-204ENST00000562357 GNAI1P63096 354 aa23.17■■□□□ 1.3
CMTM3-204ENST00000562357 IFT57Q9NWB7 429 aa23.17■■□□□ 1.3
CMTM3-204ENST00000562357 SRGNP10124 158 aa23.16■■□□□ 1.3
CMTM3-204ENST00000562357 HDGFL1Q5TGJ6 251 aa23.16■■□□□ 1.3
CMTM3-204ENST00000562357 ANKRD31Q8N7Z5 1873 aa23.15■■□□□ 1.3
CMTM3-204ENST00000562357 GPTP24298 496 aa23.15■■□□□ 1.3
CMTM3-204ENST00000562357 KRT24Q2M2I5 525 aa23.15■■□□□ 1.3
CMTM3-204ENST00000562357 CCDC184Q52MB2 194 aa23.15■■□□□ 1.3
CMTM3-204ENST00000562357 SOGA3Q5TF21 947 aa23.15■■□□□ 1.3
CMTM3-204ENST00000562357 GIGYF2Q6Y7W6 1299 aaKnown RBP23.15■■□□□ 1.3
CMTM3-204ENST00000562357 DDX21Q9NR30 783 aaKnown RBP eCLIP23.15■■□□□ 1.3
CMTM3-204ENST00000562357 NPR1P16066 1061 aa23.14■■□□□ 1.29
CMTM3-204ENST00000562357 PDIA6Q15084 440 aa23.14■■□□□ 1.29
CMTM3-204ENST00000562357 MBIPQ9NS73 344 aa23.14■■□□□ 1.29
CMTM3-204ENST00000562357 C21orf2O43822 256 aa23.13■■□□□ 1.29
CMTM3-204ENST00000562357 ANXA1P04083 346 aa23.13■■□□□ 1.29
CMTM3-204ENST00000562357 LMNB1P20700 586 aa23.13■■□□□ 1.29
CMTM3-204ENST00000562357 RASSF7Q02833 373 aa23.13■■□□□ 1.29
CMTM3-204ENST00000562357 AIMP1Q12904 312 aaKnown RBP23.13■■□□□ 1.29
CMTM3-204ENST00000562357 PROSER3Q2NL68 480 aa23.13■■□□□ 1.29
CMTM3-204ENST00000562357 PARP10Q53GL7 1025 aa23.13■■□□□ 1.29
CMTM3-204ENST00000562357 HSP90AB3PQ58FF7 597 aa23.13■■□□□ 1.29
CMTM3-204ENST00000562357 PRPF40BQ6NWY9 871 aaKnown RBP23.13■■□□□ 1.29
CMTM3-204ENST00000562357 ZNF219Q9P2Y4 722 aaPredicted RBP23.13■■□□□ 1.29
CMTM3-204ENST00000562357 IBTKQ9P2D0 1353 aaPredicted RBP23.13■■□□□ 1.29
CMTM3-204ENST00000562357 COL11A2P13942 1736 aaPredicted RBP23.12■■□□□ 1.29
CMTM3-204ENST00000562357 DUSP27Q5VZP5 1158 aa23.12■■□□□ 1.29
CMTM3-204ENST00000562357 COPS6Q7L5N1 327 aa23.12■■□□□ 1.29
CMTM3-204ENST00000562357 PPP1R42Q7Z4L9 355 aa23.12■■□□□ 1.29
CMTM3-204ENST00000562357 XAGE3Q8WTP9 111 aa23.12■■□□□ 1.29
CMTM3-204ENST00000562357 CHPF2Q9P2E5 772 aa23.12■■□□□ 1.29
CMTM3-204ENST00000562357 DBF4Q9UBU7 674 aaPredicted RBP23.12■■□□□ 1.29
CMTM3-204ENST00000562357 LRP10Q7Z4F1 713 aa23.11■■□□□ 1.29
CMTM3-204ENST00000562357 CHMP4AQ9BY43 222 aa23.11■■□□□ 1.29
CMTM3-204ENST00000562357 KDM2BQ8NHM5 1336 aa23.1■■□□□ 1.29
CMTM3-204ENST00000562357 ZC3H4Q9UPT8 1303 aaKnown RBP23.1■■□□□ 1.29
CMTM3-204ENST00000562357 ZNF853P0CG23 659 aa23.1■■□□□ 1.29
CMTM3-204ENST00000562357 NUTM1Q86Y26 1132 aa23.1■■□□□ 1.29
CMTM3-204ENST00000562357 ZNF34Q8IZ26 560 aa23.1■■□□□ 1.29
CMTM3-204ENST00000562357 KLRG2A4D1S0 409 aaPredicted RBP23.09■■□□□ 1.29
CMTM3-204ENST00000562357 ALDH1B1P30837 517 aa23.09■■□□□ 1.29
CMTM3-204ENST00000562357 UBN2Q6ZU65 1347 aa23.08■■□□□ 1.29
CMTM3-204ENST00000562357 NUP98P52948 1817 aa23.08■■□□□ 1.29
CMTM3-204ENST00000562357 ERFEQ4G0M1 354 aa23.08■■□□□ 1.29
CMTM3-204ENST00000562357 SUSD4Q5VX71 490 aa23.08■■□□□ 1.29
CMTM3-204ENST00000562357 TAOK3Q9H2K8 898 aa23.08■■□□□ 1.29
CMTM3-204ENST00000562357 HYPKQ9NX55 129 aa23.08■■□□□ 1.29
CMTM3-204ENST00000562357 ABCC12Q96J65 1359 aa23.07■■□□□ 1.28
CMTM3-204ENST00000562357 NFKBIEO00221 500 aa23.07■■□□□ 1.28
CMTM3-204ENST00000562357 CCDC27Q2M243 656 aa23.07■■□□□ 1.28
CMTM3-204ENST00000562357 RPGRQ92834 1020 aaKnown RBP23.07■■□□□ 1.28
CMTM3-204ENST00000562357 UTP14AQ9BVJ6 771 aaKnown RBP23.07■■□□□ 1.28
CMTM3-204ENST00000562357 SENP3-EIF4A1A0A087X0R7 540 aa23.06■■□□□ 1.28
CMTM3-204ENST00000562357 CCDC93Q567U6 631 aa23.06■■□□□ 1.28
CMTM3-204ENST00000562357 RNF123Q5XPI4 1314 aa23.06■■□□□ 1.28
CMTM3-204ENST00000562357 NTSR2O95665 410 aa23.05■■□□□ 1.28
CMTM3-204ENST00000562357 RIC1Q4ADV7 1423 aa23.05■■□□□ 1.28
CMTM3-204ENST00000562357 LTBP3Q9NS15 1303 aa23.05■■□□□ 1.28
CMTM3-204ENST00000562357 ELL2O00472 640 aaPredicted RBP23.04■■□□□ 1.28
CMTM3-204ENST00000562357 CRY2Q49AN0 593 aa23.04■■□□□ 1.28
CMTM3-204ENST00000562357 C16orf71Q8IYS4 520 aaPredicted RBP23.04■■□□□ 1.28
CMTM3-204ENST00000562357 PLBD2Q8NHP8 589 aa23.04■■□□□ 1.28
CMTM3-204ENST00000562357 KIF3CO14782 793 aa23.03■■□□□ 1.28
CMTM3-204ENST00000562357 TCIRG1Q13488 830 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms