RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 BRCA1P38398 1863 aaKnown RBP31.09■■■□□ 2.57
CDR2-202ENST00000561630 H0YIN7 160 aa31.08■■■□□ 2.57
CDR2-202ENST00000561630 PDIA6Q15084 440 aa31.08■■■□□ 2.57
CDR2-202ENST00000561630 TTLL7Q6ZT98 887 aa31.08■■■□□ 2.57
CDR2-202ENST00000561630 C2CD5Q86YS7 1000 aa31.08■■■□□ 2.57
CDR2-202ENST00000561630 NIP7Q9Y221 180 aaKnown RBP eCLIP31.08■■■□□ 2.57
CDR2-202ENST00000561630 MAP3K15Q6ZN16 1313 aa31.07■■■□□ 2.56
CDR2-202ENST00000561630 PDE6BP35913 854 aa31.07■■■□□ 2.56
CDR2-202ENST00000561630 CALD1Q05682 793 aaKnown RBP31.07■■■□□ 2.56
CDR2-202ENST00000561630 KRT24Q2M2I5 525 aa31.07■■■□□ 2.56
CDR2-202ENST00000561630 KIF6Q6ZMV9 814 aa31.07■■■□□ 2.56
CDR2-202ENST00000561630 ARHGAP27Q6ZUM4 889 aa31.07■■■□□ 2.56
CDR2-202ENST00000561630 LRP10Q7Z4F1 713 aa31.07■■■□□ 2.56
CDR2-202ENST00000561630 NBPF5PQ86XG9 351 aaPredicted RBP31.07■■■□□ 2.56
CDR2-202ENST00000561630 CCDC24Q8N4L8 307 aa31.07■■■□□ 2.56
CDR2-202ENST00000561630 PDZRN3Q9UPQ7 1066 aa31.07■■■□□ 2.56
CDR2-202ENST00000561630 NPHP1O15259 732 aa31.06■■■□□ 2.56
CDR2-202ENST00000561630 ZNF853P0CG23 659 aa31.06■■■□□ 2.56
CDR2-202ENST00000561630 ST5P78524 1137 aa31.06■■■□□ 2.56
CDR2-202ENST00000561630 IFT57Q9NWB7 429 aa31.05■■■□□ 2.56
CDR2-202ENST00000561630 MBIPQ9NS73 344 aa31.04■■■□□ 2.56
CDR2-202ENST00000561630 ADCY9O60503 1353 aa31.04■■■□□ 2.56
CDR2-202ENST00000561630 HOXB7P09629 217 aa31.03■■■□□ 2.56
CDR2-202ENST00000561630 PROSER3Q2NL68 480 aa31.03■■■□□ 2.56
CDR2-202ENST00000561630 TPTE2Q6XPS3 522 aa31.03■■■□□ 2.56
CDR2-202ENST00000561630 TTLL6Q8N841 843 aa31.03■■■□□ 2.56
CDR2-202ENST00000561630 GNAI1P63096 354 aa31.02■■■□□ 2.56
CDR2-202ENST00000561630 NECTIN2Q92692 538 aa31.02■■■□□ 2.56
CDR2-202ENST00000561630 ZBTB3Q9H5J0 574 aa31.02■■■□□ 2.56
CDR2-202ENST00000561630 ATP10DQ9P241 1426 aa31■■■□□ 2.55
CDR2-202ENST00000561630 ANXA1P04083 346 aa31■■■□□ 2.55
CDR2-202ENST00000561630 DDX21Q9NR30 783 aaKnown RBP eCLIP30.99■■■□□ 2.55
CDR2-202ENST00000561630 ARFGEF1Q9Y6D6 1849 aa30.98■■■□□ 2.55
CDR2-202ENST00000561630 CCDC27Q2M243 656 aa30.98■■■□□ 2.55
CDR2-202ENST00000561630 GIGYF2Q6Y7W6 1299 aaKnown RBP30.98■■■□□ 2.55
CDR2-202ENST00000561630 ANKRD31Q8N7Z5 1873 aa30.97■■■□□ 2.55
CDR2-202ENST00000561630 HDGFL1Q5TGJ6 251 aa30.97■■■□□ 2.55
CDR2-202ENST00000561630 DUSP27Q5VZP5 1158 aa30.97■■■□□ 2.55
CDR2-202ENST00000561630 ZNF622Q969S3 477 aaKnown RBP eCLIP30.97■■■□□ 2.553e-8■□□□□ 8.3
CDR2-202ENST00000561630 FAM177BA6PVY3 158 aa30.96■■■□□ 2.55
CDR2-202ENST00000561630 SRGNP10124 158 aa30.96■■■□□ 2.55
CDR2-202ENST00000561630 NCBP3Q53F19 620 aaKnown RBP30.96■■■□□ 2.55
CDR2-202ENST00000561630 DLEC1Q9Y238 1755 aa30.96■■■□□ 2.55
CDR2-202ENST00000561630 KLRG2A4D1S0 409 aaPredicted RBP30.95■■■□□ 2.55
CDR2-202ENST00000561630 COPS6Q7L5N1 327 aa30.95■■■□□ 2.55
CDR2-202ENST00000561630 ZNF34Q8IZ26 560 aa30.95■■■□□ 2.55
CDR2-202ENST00000561630 NYXQ9GZU5 481 aa30.95■■■□□ 2.55
CDR2-202ENST00000561630 CHPF2Q9P2E5 772 aa30.95■■■□□ 2.55
CDR2-202ENST00000561630 STYK1Q6J9G0 422 aa30.94■■■□□ 2.54
CDR2-202ENST00000561630 XAGE3Q8WTP9 111 aa30.94■■■□□ 2.54
CDR2-202ENST00000561630 UBN2Q6ZU65 1347 aa30.94■■■□□ 2.54
CDR2-202ENST00000561630 GPTP24298 496 aa30.93■■■□□ 2.54
CDR2-202ENST00000561630 WWC1Q8IX03 1113 aa30.93■■■□□ 2.54
CDR2-202ENST00000561630 MASTLQ96GX5 879 aa30.93■■■□□ 2.54
CDR2-202ENST00000561630 SENP3-EIF4A1A0A087X0R7 540 aa30.92■■■□□ 2.54
CDR2-202ENST00000561630 GTF2E1P29083 439 aaPredicted RBP30.92■■■□□ 2.54
CDR2-202ENST00000561630 CNKSR1Q969H4 720 aa30.92■■■□□ 2.54
CDR2-202ENST00000561630 DBF4Q9UBU7 674 aaPredicted RBP30.92■■■□□ 2.54
CDR2-202ENST00000561630 IBTKQ9P2D0 1353 aaPredicted RBP30.92■■■□□ 2.54
CDR2-202ENST00000561630 AIMP1Q12904 312 aaKnown RBP30.91■■■□□ 2.54
CDR2-202ENST00000561630 C9orf131Q5VYM1 1079 aa30.91■■■□□ 2.54
CDR2-202ENST00000561630 COL11A2P13942 1736 aaPredicted RBP30.9■■■□□ 2.54
CDR2-202ENST00000561630 SUSD4Q5VX71 490 aa30.9■■■□□ 2.54
CDR2-202ENST00000561630 PARP10Q53GL7 1025 aa30.89■■■□□ 2.54
CDR2-202ENST00000561630 NUTM1Q86Y26 1132 aa30.89■■■□□ 2.54
CDR2-202ENST00000561630 NUP98P52948 1817 aa30.89■■■□□ 2.53
CDR2-202ENST00000561630 NPR1P16066 1061 aa30.88■■■□□ 2.53
CDR2-202ENST00000561630 GPBP1L1Q9HC44 474 aaPredicted RBP30.88■■■□□ 2.53
CDR2-202ENST00000561630 ELL2O00472 640 aaPredicted RBP30.87■■■□□ 2.53
CDR2-202ENST00000561630 ERFEQ4G0M1 354 aa30.87■■■□□ 2.53
CDR2-202ENST00000561630 HSP90AB3PQ58FF7 597 aa30.87■■■□□ 2.53
CDR2-202ENST00000561630 PRPF40BQ6NWY9 871 aaKnown RBP30.87■■■□□ 2.53
CDR2-202ENST00000561630 C8orf58Q8NAV2 365 aa30.87■■■□□ 2.53
CDR2-202ENST00000561630 HYPKQ9NX55 129 aa30.87■■■□□ 2.53
CDR2-202ENST00000561630 ABCC12Q96J65 1359 aa30.87■■■□□ 2.53
CDR2-202ENST00000561630 C21orf2O43822 256 aa30.86■■■□□ 2.53
CDR2-202ENST00000561630 NTSR2O95665 410 aa30.86■■■□□ 2.53
CDR2-202ENST00000561630 PPP1R42Q7Z4L9 355 aa30.86■■■□□ 2.53
CDR2-202ENST00000561630 ZNF526Q8TF50 670 aaPredicted RBP30.86■■■□□ 2.53
CDR2-202ENST00000561630 IL16Q14005 1332 aa30.86■■■□□ 2.53
CDR2-202ENST00000561630 RASSF7Q02833 373 aa30.85■■■□□ 2.53
CDR2-202ENST00000561630 RNF181Q9P0P0 153 aa30.85■■■□□ 2.53
CDR2-202ENST00000561630 FAM9BQ8IZU0 186 aa30.84■■■□□ 2.53
CDR2-202ENST00000561630 TSR2Q969E8 191 aaKnown RBP30.84■■■□□ 2.53
CDR2-202ENST00000561630 RIC1Q4ADV7 1423 aa30.83■■■□□ 2.53
CDR2-202ENST00000561630 NFKBIEO00221 500 aa30.83■■■□□ 2.53
CDR2-202ENST00000561630 TCIRG1Q13488 830 aa30.83■■■□□ 2.53
CDR2-202ENST00000561630 CRY2Q49AN0 593 aa30.83■■■□□ 2.53
CDR2-202ENST00000561630 ANKRD13DQ6ZTN6 518 aa30.83■■■□□ 2.53
CDR2-202ENST00000561630 PLBD2Q8NHP8 589 aa30.83■■■□□ 2.53
CDR2-202ENST00000561630 ZNF219Q9P2Y4 722 aaPredicted RBP30.83■■■□□ 2.53
CDR2-202ENST00000561630 LMNB1P20700 586 aa30.82■■■□□ 2.52
CDR2-202ENST00000561630 UTP14AQ9BVJ6 771 aaKnown RBP30.82■■■□□ 2.52
CDR2-202ENST00000561630 CHMP4AQ9BY43 222 aa30.82■■■□□ 2.52
CDR2-202ENST00000561630 PRELPP51888 382 aa30.81■■■□□ 2.52
CDR2-202ENST00000561630 SOGA3Q5TF21 947 aa30.8■■■□□ 2.52
CDR2-202ENST00000561630 NLRP10Q86W26 655 aa30.8■■■□□ 2.52
CDR2-202ENST00000561630 TSPYL6Q8N831 410 aa30.8■■■□□ 2.52
CDR2-202ENST00000561630 C7orf43Q8WVR3 580 aa30.8■■■□□ 2.52
CDR2-202ENST00000561630 RNF123Q5XPI4 1314 aa30.79■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms