RNA–Protein interactions for RNA: ENST00000561557.1

LINC00566-201, long intergenic non-protein coding RNA 566, humanhuman

TSL 1 (best) BASIC

Gene LINC00566, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00566-201ENST00000561557 VASPP50552 380 aaPredicted RBP12.53□□□□□ -0.4
LINC00566-201ENST00000561557 MTFR1LQ9H019 292 aa12.53□□□□□ -0.4
LINC00566-201ENST00000561557 SPON1Q9HCB6 807 aa12.53□□□□□ -0.4
LINC00566-201ENST00000561557 CHL1O00533 1208 aa12.52□□□□□ -0.41
LINC00566-201ENST00000561557 GNPATO15228 680 aa12.52□□□□□ -0.41
LINC00566-201ENST00000561557 TRAPPC3LQ5T215 181 aa12.52□□□□□ -0.41
LINC00566-201ENST00000561557 COL23A1Q86Y22 540 aaPredicted RBP12.52□□□□□ -0.41
LINC00566-201ENST00000561557 CFAP44Q96MT7 982 aa12.52□□□□□ -0.41
LINC00566-201ENST00000561557 CCDC87Q9NVE4 849 aa12.52□□□□□ -0.41
LINC00566-201ENST00000561557 TSPYL4Q9UJ04 414 aa12.52□□□□□ -0.41
LINC00566-201ENST00000561557 COL5A3P25940 1745 aaPredicted RBP12.51□□□□□ -0.41
LINC00566-201ENST00000561557 CASZ1Q86V15 1759 aa12.51□□□□□ -0.41
LINC00566-201ENST00000561557 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.51□□□□□ -0.41
LINC00566-201ENST00000561557 EIF4A1P60842 406 aaKnown RBP12.51□□□□□ -0.41
LINC00566-201ENST00000561557 INTS5Q6P9B9 1019 aaKnown RBP12.51□□□□□ -0.41
LINC00566-201ENST00000561557 C3orf67Q6ZVT6 689 aa12.51□□□□□ -0.41
LINC00566-201ENST00000561557 PLCD3Q8N3E9 789 aa12.51□□□□□ -0.41
LINC00566-201ENST00000561557 MIS18AQ9NYP9 233 aa12.51□□□□□ -0.41
LINC00566-201ENST00000561557 TJP1Q07157 1748 aa12.51□□□□□ -0.41
LINC00566-201ENST00000561557 ZNF853P0CG23 659 aa12.5□□□□□ -0.41
LINC00566-201ENST00000561557 GNAI1P63096 354 aa12.5□□□□□ -0.41
LINC00566-201ENST00000561557 PDGFDQ9GZP0 370 aaPredicted RBP12.5□□□□□ -0.41
LINC00566-201ENST00000561557 IFT57Q9NWB7 429 aa12.5□□□□□ -0.41
LINC00566-201ENST00000561557 KDM3BQ7LBC6 1761 aa12.5□□□□□ -0.41
LINC00566-201ENST00000561557 UBR3Q6ZT12 1888 aa12.5□□□□□ -0.41
LINC00566-201ENST00000561557 MYH14Q7Z406 1995 aaKnown RBP12.49□□□□□ -0.41
LINC00566-201ENST00000561557 IL16Q14005 1332 aa12.49□□□□□ -0.41
LINC00566-201ENST00000561557 A0A087WZG4 1122 aa12.49□□□□□ -0.41
LINC00566-201ENST00000561557 GIGYF1O75420 1035 aaPredicted RBP12.49□□□□□ -0.41
LINC00566-201ENST00000561557 WDR63Q8IWG1 891 aa12.49□□□□□ -0.41
LINC00566-201ENST00000561557 WWC1Q8IX03 1113 aa12.49□□□□□ -0.41
LINC00566-201ENST00000561557 RNF166Q96A37 237 aaPredicted RBP12.49□□□□□ -0.41
LINC00566-201ENST00000561557 USP16Q9Y5T5 823 aa12.49□□□□□ -0.41
LINC00566-201ENST00000561557 TUBGCP6Q96RT7 1819 aa12.48□□□□□ -0.41
LINC00566-201ENST00000561557 LRP5O75197 1615 aa12.48□□□□□ -0.41
LINC00566-201ENST00000561557 SOS1Q07889 1333 aaPredicted RBP12.48□□□□□ -0.41
LINC00566-201ENST00000561557 PHF14O94880 888 aa12.48□□□□□ -0.41
LINC00566-201ENST00000561557 ZBTB7AO95365 584 aa12.48□□□□□ -0.41
LINC00566-201ENST00000561557 RFC4P35249 363 aa12.48□□□□□ -0.41
LINC00566-201ENST00000561557 IL6STP40189 918 aaPredicted RBP12.48□□□□□ -0.41
LINC00566-201ENST00000561557 ARHGEF1Q92888 912 aaKnown RBP12.48□□□□□ -0.41
LINC00566-201ENST00000561557 LAS1LQ9Y4W2 734 aaKnown RBP12.48□□□□□ -0.41
LINC00566-201ENST00000561557 HOXB7P09629 217 aa12.47□□□□□ -0.41
LINC00566-201ENST00000561557 POLD1P28340 1107 aa12.47□□□□□ -0.41
LINC00566-201ENST00000561557 NUBP1P53384 320 aa12.47□□□□□ -0.41
LINC00566-201ENST00000561557 EIF5P55010 431 aaKnown RBP12.47□□□□□ -0.41
LINC00566-201ENST00000561557 NPM2Q86SE8 214 aaKnown RBP12.47□□□□□ -0.41
LINC00566-201ENST00000561557 AMIGO3Q86WK7 504 aa12.47□□□□□ -0.41
LINC00566-201ENST00000561557 NLGN1Q8N2Q7 840 aa12.47□□□□□ -0.41
LINC00566-201ENST00000561557 CHMP4AQ9BY43 222 aa12.47□□□□□ -0.41
LINC00566-201ENST00000561557 ZBTB1Q9Y2K1 713 aa12.47□□□□□ -0.41
LINC00566-201ENST00000561557 ERBB4Q15303 1308 aa12.46□□□□□ -0.41
LINC00566-201ENST00000561557 A1BGP04217 495 aa12.46□□□□□ -0.41
LINC00566-201ENST00000561557 CANXP27824 592 aaKnown RBP12.46□□□□□ -0.41
LINC00566-201ENST00000561557 PRAMEF22A3QJZ6 481 aa12.45□□□□□ -0.42
LINC00566-201ENST00000561557 ZPR1O75312 459 aa12.45□□□□□ -0.42
LINC00566-201ENST00000561557 PTGER2P43116 358 aa12.45□□□□□ -0.42
LINC00566-201ENST00000561557 MBIPQ9NS73 344 aa12.45□□□□□ -0.42
LINC00566-201ENST00000561557 NARFQ9UHQ1 456 aa12.45□□□□□ -0.42
LINC00566-201ENST00000561557 COL24A1Q17RW2 1714 aa12.45□□□□□ -0.42
LINC00566-201ENST00000561557 COL15A1P39059 1388 aa12.44□□□□□ -0.42
LINC00566-201ENST00000561557 RGL2O15211 777 aa12.44□□□□□ -0.42
LINC00566-201ENST00000561557 SMIM5Q71RC9 77 aa12.44□□□□□ -0.42
LINC00566-201ENST00000561557 USP42Q9H9J4 1324 aaKnown RBP12.43□□□□□ -0.42
LINC00566-201ENST00000561557 GYS1P13807 737 aa12.43□□□□□ -0.42
LINC00566-201ENST00000561557 FAM212AQ96EL1 285 aa12.43□□□□□ -0.42
LINC00566-201ENST00000561557 ARXQ96QS3 562 aa12.43□□□□□ -0.42
LINC00566-201ENST00000561557 PPP1R1BQ9UD71 204 aaPredicted RBP12.43□□□□□ -0.42
LINC00566-201ENST00000561557 SALL2Q9Y467 1007 aaPredicted RBP12.42□□□□□ -0.42
LINC00566-201ENST00000561557 ZNF521Q96K83 1311 aa12.41□□□□□ -0.42
LINC00566-201ENST00000561557 LAMB4A4D0S4 1761 aa12.41□□□□□ -0.42
LINC00566-201ENST00000561557 NBPF26B4DH59 902 aa12.41□□□□□ -0.42
LINC00566-201ENST00000561557 EIF2S2P20042 333 aaKnown RBP12.41□□□□□ -0.42
LINC00566-201ENST00000561557 DUSP27Q5VZP5 1158 aa12.41□□□□□ -0.42
LINC00566-201ENST00000561557 USPL1Q5W0Q7 1092 aa12.41□□□□□ -0.42
LINC00566-201ENST00000561557 NBPF10Q6P3W6 841 aaKnown RBP12.41□□□□□ -0.42
LINC00566-201ENST00000561557 NBPF15Q8N660 670 aa12.41□□□□□ -0.42
LINC00566-201ENST00000561557 PDCD7Q8N8D1 485 aaKnown RBP12.41□□□□□ -0.42
LINC00566-201ENST00000561557 GOLGA2Q08379 1002 aa12.4□□□□□ -0.42
LINC00566-201ENST00000561557 MSL1Q68DK7 614 aa12.4□□□□□ -0.42
LINC00566-201ENST00000561557 CLEC4GQ6UXB4 293 aa12.4□□□□□ -0.42
LINC00566-201ENST00000561557 DZIP3Q86Y13 1208 aaKnown RBP12.4□□□□□ -0.42
LINC00566-201ENST00000561557 MYH16Q9H6N6 1097 aa12.4□□□□□ -0.42
LINC00566-201ENST00000561557 DDX21Q9NR30 783 aaKnown RBP eCLIP12.4□□□□□ -0.42
LINC00566-201ENST00000561557 ZBTB47Q9UFB7 747 aaPredicted RBP12.4□□□□□ -0.42
LINC00566-201ENST00000561557 SRP68Q9UHB9 627 aaKnown RBP12.4□□□□□ -0.42
LINC00566-201ENST00000561557 ERVV-1B6SEH8 477 aa12.39□□□□□ -0.43
LINC00566-201ENST00000561557 TM4SF1P30408 202 aa12.39□□□□□ -0.43
LINC00566-201ENST00000561557 HDGFL1Q5TGJ6 251 aa12.39□□□□□ -0.43
LINC00566-201ENST00000561557 L3MBTL3Q96JM7 780 aaPredicted RBP12.39□□□□□ -0.43
LINC00566-201ENST00000561557 DBF4Q9UBU7 674 aaPredicted RBP12.39□□□□□ -0.43
LINC00566-201ENST00000561557 TBC1D2BQ9UPU7 963 aa12.39□□□□□ -0.43
LINC00566-201ENST00000561557 ZNF652Q9Y2D9 606 aa12.39□□□□□ -0.43
LINC00566-201ENST00000561557 ZNF330Q9Y3S2 320 aaPredicted RBP12.39□□□□□ -0.43
LINC00566-201ENST00000561557 PARP3Q9Y6F1 533 aa12.39□□□□□ -0.43
LINC00566-201ENST00000561557 C4AP0C0L4 1744 aa12.39□□□□□ -0.43
LINC00566-201ENST00000561557 SENP3-EIF4A1A0A087X0R7 540 aa12.38□□□□□ -0.43
LINC00566-201ENST00000561557 CAMTA2O94983 1202 aa12.38□□□□□ -0.43
LINC00566-201ENST00000561557 MMP10P09238 476 aa12.38□□□□□ -0.43
LINC00566-201ENST00000561557 PDIA6Q15084 440 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms