RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 MAP3K15Q6ZN16 1313 aa27■■□□□ 1.91
TPM1-232ENST00000561425 TTLL7Q6ZT98 887 aa27■■□□□ 1.91
TPM1-232ENST00000561425 H0YIN7 160 aa26.98■■□□□ 1.91
TPM1-232ENST00000561425 MYL6BP14649 208 aa26.98■■□□□ 1.91
TPM1-232ENST00000561425 PDE6BP35913 854 aa26.98■■□□□ 1.91
TPM1-232ENST00000561425 KRT24Q2M2I5 525 aa26.98■■□□□ 1.91
TPM1-232ENST00000561425 NCBP3Q53F19 620 aaKnown RBP26.98■■□□□ 1.91
TPM1-232ENST00000561425 C2CD5Q86YS7 1000 aa26.98■■□□□ 1.91
TPM1-232ENST00000561425 CNBD1Q8NA66 436 aa26.98■■□□□ 1.91
TPM1-232ENST00000561425 HOXB7P09629 217 aa26.97■■□□□ 1.91
TPM1-232ENST00000561425 NIP7Q9Y221 180 aaKnown RBP eCLIP26.97■■□□□ 1.91
TPM1-232ENST00000561425 EIF2S2P20042 333 aaKnown RBP26.96■■□□□ 1.91
TPM1-232ENST00000561425 ARHGAP27Q6ZUM4 889 aa26.96■■□□□ 1.91
TPM1-232ENST00000561425 NGEFQ8N5V2 710 aa26.96■■□□□ 1.91
TPM1-232ENST00000561425 MRS2Q9HD23 443 aa26.96■■□□□ 1.91
TPM1-232ENST00000561425 MBIPQ9NS73 344 aa26.96■■□□□ 1.91
TPM1-232ENST00000561425 IFT57Q9NWB7 429 aa26.96■■□□□ 1.91
TPM1-232ENST00000561425 LAS1LQ9Y4W2 734 aaKnown RBP26.96■■□□□ 1.91
TPM1-232ENST00000561425 ARFGEF1Q9Y6D6 1849 aa26.95■■□□□ 1.91
TPM1-232ENST00000561425 KLRG2A4D1S0 409 aaPredicted RBP26.95■■□□□ 1.9
TPM1-232ENST00000561425 CALD1Q05682 793 aaKnown RBP26.95■■□□□ 1.9
TPM1-232ENST00000561425 CCDC27Q2M243 656 aa26.95■■□□□ 1.9
TPM1-232ENST00000561425 PROSER3Q2NL68 480 aa26.95■■□□□ 1.9
TPM1-232ENST00000561425 TPTE2Q6XPS3 522 aa26.95■■□□□ 1.9
TPM1-232ENST00000561425 CCDC24Q8N4L8 307 aa26.95■■□□□ 1.9
TPM1-232ENST00000561425 ANKRD31Q8N7Z5 1873 aa26.94■■□□□ 1.9
TPM1-232ENST00000561425 ATP10DQ9P241 1426 aa26.94■■□□□ 1.9
TPM1-232ENST00000561425 KIF6Q6ZMV9 814 aa26.94■■□□□ 1.9
TPM1-232ENST00000561425 NBPF5PQ86XG9 351 aaPredicted RBP26.94■■□□□ 1.9
TPM1-232ENST00000561425 TTLL6Q8N841 843 aa26.94■■□□□ 1.9
TPM1-232ENST00000561425 GNAI1P63096 354 aa26.93■■□□□ 1.9
TPM1-232ENST00000561425 ST5P78524 1137 aa26.93■■□□□ 1.9
TPM1-232ENST00000561425 GIGYF2Q6Y7W6 1299 aaKnown RBP26.93■■□□□ 1.9
TPM1-232ENST00000561425 DDX21Q9NR30 783 aaKnown RBP eCLIP26.93■■□□□ 1.9
TPM1-232ENST00000561425 DLEC1Q9Y238 1755 aa26.93■■□□□ 1.9
TPM1-232ENST00000561425 ZNF34Q8IZ26 560 aa26.92■■□□□ 1.9
TPM1-232ENST00000561425 SRGNP10124 158 aa26.91■■□□□ 1.9
TPM1-232ENST00000561425 ANXA1P04083 346 aa26.9■■□□□ 1.9
TPM1-232ENST00000561425 ZBTB3Q9H5J0 574 aa26.9■■□□□ 1.9
TPM1-232ENST00000561425 DUSP27Q5VZP5 1158 aa26.89■■□□□ 1.9
TPM1-232ENST00000561425 STYK1Q6J9G0 422 aa26.89■■□□□ 1.9
TPM1-232ENST00000561425 IBTKQ9P2D0 1353 aaPredicted RBP26.88■■□□□ 1.89
TPM1-232ENST00000561425 COPS6Q7L5N1 327 aa26.88■■□□□ 1.89
TPM1-232ENST00000561425 WWC1Q8IX03 1113 aa26.88■■□□□ 1.89
TPM1-232ENST00000561425 UBN2Q6ZU65 1347 aa26.88■■□□□ 1.89
TPM1-232ENST00000561425 MASTLQ96GX5 879 aa26.87■■□□□ 1.89
TPM1-232ENST00000561425 NUP98P52948 1817 aa26.86■■□□□ 1.89
TPM1-232ENST00000561425 HDGFL1Q5TGJ6 251 aa26.86■■□□□ 1.89
TPM1-232ENST00000561425 XAGE3Q8WTP9 111 aa26.86■■□□□ 1.89
TPM1-232ENST00000561425 NECTIN2Q92692 538 aa26.86■■□□□ 1.89
TPM1-232ENST00000561425 ZNF622Q969S3 477 aaKnown RBP eCLIP26.86■■□□□ 1.891e-6■■■□□ 16.7
TPM1-232ENST00000561425 NYXQ9GZU5 481 aa26.86■■□□□ 1.89
TPM1-232ENST00000561425 CHPF2Q9P2E5 772 aa26.86■■□□□ 1.89
TPM1-232ENST00000561425 NPHP1O15259 732 aa26.85■■□□□ 1.89
TPM1-232ENST00000561425 SUSD4Q5VX71 490 aa26.85■■□□□ 1.89
TPM1-232ENST00000561425 CNKSR1Q969H4 720 aa26.85■■□□□ 1.89
TPM1-232ENST00000561425 DBF4Q9UBU7 674 aaPredicted RBP26.85■■□□□ 1.89
TPM1-232ENST00000561425 COL11A2P13942 1736 aaPredicted RBP26.84■■□□□ 1.89
TPM1-232ENST00000561425 PARP10Q53GL7 1025 aa26.83■■□□□ 1.89
TPM1-232ENST00000561425 C9orf131Q5VYM1 1079 aa26.83■■□□□ 1.89
TPM1-232ENST00000561425 RIC1Q4ADV7 1423 aa26.82■■□□□ 1.88
TPM1-232ENST00000561425 FAM177BA6PVY3 158 aa26.82■■□□□ 1.88
TPM1-232ENST00000561425 NTSR2O95665 410 aa26.82■■□□□ 1.88
TPM1-232ENST00000561425 NPR1P16066 1061 aa26.82■■□□□ 1.88
TPM1-232ENST00000561425 GPTP24298 496 aa26.82■■□□□ 1.88
TPM1-232ENST00000561425 CRY2Q49AN0 593 aa26.82■■□□□ 1.88
TPM1-232ENST00000561425 C8orf58Q8NAV2 365 aa26.82■■□□□ 1.88
TPM1-232ENST00000561425 C7orf43Q8WVR3 580 aa26.82■■□□□ 1.88
TPM1-232ENST00000561425 IL16Q14005 1332 aa26.82■■□□□ 1.88
TPM1-232ENST00000561425 ERFEQ4G0M1 354 aa26.81■■□□□ 1.88
TPM1-232ENST00000561425 NFKBIEO00221 500 aa26.8■■□□□ 1.88
TPM1-232ENST00000561425 PRELPP51888 382 aa26.8■■□□□ 1.88
TPM1-232ENST00000561425 TCIRG1Q13488 830 aa26.8■■□□□ 1.88
TPM1-232ENST00000561425 HSP90AB3PQ58FF7 597 aa26.8■■□□□ 1.88
TPM1-232ENST00000561425 SLC10A5Q5PT55 438 aa26.8■■□□□ 1.88
TPM1-232ENST00000561425 NUTM1Q86Y26 1132 aa26.8■■□□□ 1.88
TPM1-232ENST00000561425 HYPKQ9NX55 129 aa26.8■■□□□ 1.88
TPM1-232ENST00000561425 ABCC12Q96J65 1359 aa26.8■■□□□ 1.88
TPM1-232ENST00000561425 GTF2E1P29083 439 aaPredicted RBP26.79■■□□□ 1.88
TPM1-232ENST00000561425 AIMP1Q12904 312 aaKnown RBP26.79■■□□□ 1.88
TPM1-232ENST00000561425 PRPF40BQ6NWY9 871 aaKnown RBP26.79■■□□□ 1.88
TPM1-232ENST00000561425 PPP1R42Q7Z4L9 355 aa26.79■■□□□ 1.88
TPM1-232ENST00000561425 PLBD2Q8NHP8 589 aa26.79■■□□□ 1.88
TPM1-232ENST00000561425 GPBP1L1Q9HC44 474 aaPredicted RBP26.79■■□□□ 1.88
TPM1-232ENST00000561425 C21orf2O43822 256 aa26.78■■□□□ 1.88
TPM1-232ENST00000561425 RASSF7Q02833 373 aa26.77■■□□□ 1.88
TPM1-232ENST00000561425 ANKRD13DQ6ZTN6 518 aa26.77■■□□□ 1.88
TPM1-232ENST00000561425 RNF123Q5XPI4 1314 aa26.76■■□□□ 1.87
TPM1-232ENST00000561425 LTBP3Q9NS15 1303 aa26.76■■□□□ 1.87
TPM1-232ENST00000561425 ELL2O00472 640 aaPredicted RBP26.76■■□□□ 1.87
TPM1-232ENST00000561425 HOXA10P31260 410 aaPredicted RBP26.76■■□□□ 1.87
TPM1-232ENST00000561425 NLRP10Q86W26 655 aa26.76■■□□□ 1.87
TPM1-232ENST00000561425 WDR63Q8IWG1 891 aa26.76■■□□□ 1.87
TPM1-232ENST00000561425 TSPYL6Q8N831 410 aa26.76■■□□□ 1.87
TPM1-232ENST00000561425 RNF181Q9P0P0 153 aa26.76■■□□□ 1.87
TPM1-232ENST00000561425 SBF1O95248 1867 aa26.75■■□□□ 1.87
TPM1-232ENST00000561425 SLX4Q8IY92 1834 aa26.75■■□□□ 1.87
TPM1-232ENST00000561425 SENP3-EIF4A1A0A087X0R7 540 aa26.75■■□□□ 1.87
TPM1-232ENST00000561425 LMNB1P20700 586 aa26.75■■□□□ 1.87
TPM1-232ENST00000561425 C1QTNF8P60827 252 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms