RNA–Protein interactions for RNA: ENST00000561169.5

KNSTRN-213, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 2

Gene KNSTRN, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-213ENST00000561169 PARP3Q9Y6F1 533 aa22.22■■□□□ 1.15
KNSTRN-213ENST00000561169 ELL2O00472 640 aaPredicted RBP22.21■■□□□ 1.15
KNSTRN-213ENST00000561169 HOXB7P09629 217 aa22.21■■□□□ 1.15
KNSTRN-213ENST00000561169 PXDNLA1KZ92 1463 aa22.2■■□□□ 1.14
KNSTRN-213ENST00000561169 ANKRD36CQ5JPF3 1778 aa22.2■■□□□ 1.14
KNSTRN-213ENST00000561169 FANCIQ9NVI1 1328 aa22.2■■□□□ 1.14
KNSTRN-213ENST00000561169 HLFQ16534 295 aa22.2■■□□□ 1.14
KNSTRN-213ENST00000561169 HDGFL1Q5TGJ6 251 aa22.2■■□□□ 1.14
KNSTRN-213ENST00000561169 NPM2Q86SE8 214 aaKnown RBP22.2■■□□□ 1.14
KNSTRN-213ENST00000561169 WDR63Q8IWG1 891 aa22.2■■□□□ 1.14
KNSTRN-213ENST00000561169 CHPF2Q9P2E5 772 aa22.2■■□□□ 1.14
KNSTRN-213ENST00000561169 CARMIL3Q8ND23 1372 aa22.19■■□□□ 1.14
KNSTRN-213ENST00000561169 MAP3K15Q6ZN16 1313 aa22.17■■□□□ 1.14
KNSTRN-213ENST00000561169 CACNA1FO60840 1977 aa22.17■■□□□ 1.14
KNSTRN-213ENST00000561169 DDX21Q9NR30 783 aaKnown RBP eCLIP22.17■■□□□ 1.14
KNSTRN-213ENST00000561169 DLEC1Q9Y238 1755 aa22.17■■□□□ 1.14
KNSTRN-213ENST00000561169 COL11A2P13942 1736 aaPredicted RBP22.17■■□□□ 1.14
KNSTRN-213ENST00000561169 SERPINB2P05120 415 aa22.16■■□□□ 1.14
KNSTRN-213ENST00000561169 ZBTB3Q9H5J0 574 aa22.16■■□□□ 1.14
KNSTRN-213ENST00000561169 ARFGEF2Q9Y6D5 1785 aa22.16■■□□□ 1.14
KNSTRN-213ENST00000561169 XAGE3Q8WTP9 111 aa22.15■■□□□ 1.14
KNSTRN-213ENST00000561169 CLEC4GQ6UXB4 293 aa22.14■■□□□ 1.14
KNSTRN-213ENST00000561169 WWC3Q9ULE0 1092 aa22.14■■□□□ 1.14
KNSTRN-213ENST00000561169 ATP10DQ9P241 1426 aa22.14■■□□□ 1.13
KNSTRN-213ENST00000561169 CHD4Q14839 1912 aa22.13■■□□□ 1.13
KNSTRN-213ENST00000561169 CCDC24Q8N4L8 307 aa22.13■■□□□ 1.13
KNSTRN-213ENST00000561169 ERVV-1B6SEH8 477 aa22.12■■□□□ 1.13
KNSTRN-213ENST00000561169 RGL2O15211 777 aa22.12■■□□□ 1.13
KNSTRN-213ENST00000561169 YBX3P16989 372 aaKnown RBP eCLIP22.12■■□□□ 1.13
KNSTRN-213ENST00000561169 KIF6Q6ZMV9 814 aa22.12■■□□□ 1.13
KNSTRN-213ENST00000561169 COPS6Q7L5N1 327 aa22.12■■□□□ 1.13
KNSTRN-213ENST00000561169 ZNF652Q9Y2D9 606 aa22.12■■□□□ 1.13
KNSTRN-213ENST00000561169 AIMP1Q12904 312 aaKnown RBP22.12■■□□□ 1.13
KNSTRN-213ENST00000561169 PRR5LQ6MZQ0 368 aa22.12■■□□□ 1.13
KNSTRN-213ENST00000561169 SETDB2Q96T68 719 aa22.12■■□□□ 1.13
KNSTRN-213ENST00000561169 DBF4Q9UBU7 674 aaPredicted RBP22.12■■□□□ 1.13
KNSTRN-213ENST00000561169 NIP7Q9Y221 180 aaKnown RBP eCLIP22.12■■□□□ 1.13
KNSTRN-213ENST00000561169 CACNA1SQ13698 1873 aa22.11■■□□□ 1.13
KNSTRN-213ENST00000561169 TNRC6CQ9HCJ0 1690 aaKnown RBP22.11■■□□□ 1.13
KNSTRN-213ENST00000561169 A0A0G2JLW4 131 aa22.11■■□□□ 1.13
KNSTRN-213ENST00000561169 DPEP1P16444 411 aa22.11■■□□□ 1.13
KNSTRN-213ENST00000561169 EXOSC9Q06265 439 aaKnown RBP22.11■■□□□ 1.13
KNSTRN-213ENST00000561169 ARFGEF1Q9Y6D6 1849 aa22.1■■□□□ 1.13
KNSTRN-213ENST00000561169 UBN2Q6ZU65 1347 aa22.1■■□□□ 1.13
KNSTRN-213ENST00000561169 TCERG1O14776 1098 aaKnown RBP22.1■■□□□ 1.13
KNSTRN-213ENST00000561169 TWISTNBQ3B726 338 aaPredicted RBP22.1■■□□□ 1.13
KNSTRN-213ENST00000561169 KCNA3P22001 575 aa22.09■■□□□ 1.13
KNSTRN-213ENST00000561169 GPTP24298 496 aa22.09■■□□□ 1.13
KNSTRN-213ENST00000561169 CHRNA5P30532 468 aa22.09■■□□□ 1.13
KNSTRN-213ENST00000561169 GIGYF2Q6Y7W6 1299 aaKnown RBP22.09■■□□□ 1.13
KNSTRN-213ENST00000561169 PELP1Q8IZL8 1130 aaKnown RBP22.09■■□□□ 1.13
KNSTRN-213ENST00000561169 PHAXQ9H814 394 aaKnown RBP22.09■■□□□ 1.13
KNSTRN-213ENST00000561169 TGFB2P61812 414 aa22.08■■□□□ 1.12
KNSTRN-213ENST00000561169 FAM177BA6PVY3 158 aa22.07■■□□□ 1.12
KNSTRN-213ENST00000561169 GOLGA2Q08379 1002 aa22.07■■□□□ 1.12
KNSTRN-213ENST00000561169 ZNF34Q8IZ26 560 aa22.07■■□□□ 1.12
KNSTRN-213ENST00000561169 CNBD1Q8NA66 436 aa22.07■■□□□ 1.12
KNSTRN-213ENST00000561169 CDCA7LQ96GN5 454 aa22.07■■□□□ 1.12
KNSTRN-213ENST00000561169 HYPKQ9NX55 129 aa22.07■■□□□ 1.12
KNSTRN-213ENST00000561169 GPR162Q16538 588 aa22.06■■□□□ 1.12
KNSTRN-213ENST00000561169 CCDC30Q5VVM6 783 aa22.06■■□□□ 1.12
KNSTRN-213ENST00000561169 NBPF5PQ86XG9 351 aaPredicted RBP22.06■■□□□ 1.12
KNSTRN-213ENST00000561169 MYH16Q9H6N6 1097 aa22.06■■□□□ 1.12
KNSTRN-213ENST00000561169 ABCC12Q96J65 1359 aa22.05■■□□□ 1.12
KNSTRN-213ENST00000561169 VAMP4O75379 141 aa22.05■■□□□ 1.12
KNSTRN-213ENST00000561169 LAMB2P55268 1798 aa22.05■■□□□ 1.12
KNSTRN-213ENST00000561169 SLFN5Q08AF3 891 aa22.03■■□□□ 1.12
KNSTRN-213ENST00000561169 SUSD4Q5VX71 490 aa22.03■■□□□ 1.12
KNSTRN-213ENST00000561169 G2E3Q7L622 706 aa22.03■■□□□ 1.12
KNSTRN-213ENST00000561169 PLBD2Q8NHP8 589 aa22.03■■□□□ 1.12
KNSTRN-213ENST00000561169 SLX4Q8IY92 1834 aa22.03■■□□□ 1.12
KNSTRN-213ENST00000561169 NUTM1Q86Y26 1132 aa22.02■■□□□ 1.12
KNSTRN-213ENST00000561169 BRIP1Q9BX63 1249 aa22.02■■□□□ 1.12
KNSTRN-213ENST00000561169 NTSR2O95665 410 aa22.01■■□□□ 1.11
KNSTRN-213ENST00000561169 ANKRD13DQ6ZTN6 518 aa22.01■■□□□ 1.11
KNSTRN-213ENST00000561169 ZNF428Q96B54 188 aa22.01■■□□□ 1.11
KNSTRN-213ENST00000561169 IBTKQ9P2D0 1353 aaPredicted RBP22.01■■□□□ 1.11
KNSTRN-213ENST00000561169 DDX60Q8IY21 1712 aaKnown RBP22.01■■□□□ 1.11
KNSTRN-213ENST00000561169 E9PSI1 815 aa22■■□□□ 1.11
KNSTRN-213ENST00000561169 TCIRG1Q13488 830 aa22■■□□□ 1.11
KNSTRN-213ENST00000561169 C2CD5Q86YS7 1000 aa22■■□□□ 1.11
KNSTRN-213ENST00000561169 DCAF8L1A6NGE4 600 aa21.99■■□□□ 1.11
KNSTRN-213ENST00000561169 NPHP1O15259 732 aa21.99■■□□□ 1.11
KNSTRN-213ENST00000561169 ST5P78524 1137 aa21.99■■□□□ 1.11
KNSTRN-213ENST00000561169 ERFEQ4G0M1 354 aa21.99■■□□□ 1.11
KNSTRN-213ENST00000561169 NLRP10Q86W26 655 aa21.99■■□□□ 1.11
KNSTRN-213ENST00000561169 ADCY9O60503 1353 aa21.99■■□□□ 1.11
KNSTRN-213ENST00000561169 SLC4A2P04920 1241 aa21.99■■□□□ 1.11
KNSTRN-213ENST00000561169 TPTE2Q6XPS3 522 aa21.99■■□□□ 1.11
KNSTRN-213ENST00000561169 TRMT2AQ8IZ69 625 aaKnown RBP21.99■■□□□ 1.11
KNSTRN-213ENST00000561169 STK31Q9BXU1 1019 aa21.99■■□□□ 1.11
KNSTRN-213ENST00000561169 BCS1LQ9Y276 419 aa21.99■■□□□ 1.11
KNSTRN-213ENST00000561169 ATP5J2-PTCD1G3V325 749 aa21.98■■□□□ 1.11
KNSTRN-213ENST00000561169 PARP10Q53GL7 1025 aa21.98■■□□□ 1.11
KNSTRN-213ENST00000561169 SYNE4Q8N205 404 aa21.98■■□□□ 1.11
KNSTRN-213ENST00000561169 ISCA1Q9BUE6 129 aa21.98■■□□□ 1.11
KNSTRN-213ENST00000561169 PIM2Q9P1W9 311 aa21.98■■□□□ 1.11
KNSTRN-213ENST00000561169 TAF1P21675 1872 aa21.97■■□□□ 1.11
KNSTRN-213ENST00000561169 SBF1O95248 1867 aa21.97■■□□□ 1.11
KNSTRN-213ENST00000561169 HSP90AB3PQ58FF7 597 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms