RNA–Protein interactions for RNA: ENST00000560631.1

RNF31-222, Transcript of ring finger protein 31, human

TSL 2

Gene RNF31, Length 320 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-222	ENST00000560631	PRAMEF22	A3QJZ6	481 aa		10.47	□□□□□ -0.73
RNF31-222	ENST00000560631	ATMIN	O43313	823 aa	Predicted RBP	10.47	□□□□□ -0.73
RNF31-222	ENST00000560631	ZBTB7A	O95365	584 aa		10.47	□□□□□ -0.73
RNF31-222	ENST00000560631	A1BG	P04217	495 aa		10.47	□□□□□ -0.73
RNF31-222	ENST00000560631	ERBB4	Q15303	1308 aa		10.47	□□□□□ -0.73
RNF31-222	ENST00000560631	ZNF521	Q96K83	1311 aa		10.47	□□□□□ -0.73
RNF31-222	ENST00000560631		A0A087WZG4	1122 aa		10.46	□□□□□ -0.73
RNF31-222	ENST00000560631	RGL2	O15211	777 aa		10.46	□□□□□ -0.73
RNF31-222	ENST00000560631	PHF14	O94880	888 aa		10.46	□□□□□ -0.73
RNF31-222	ENST00000560631	RFC4	P35249	363 aa		10.46	□□□□□ -0.73
RNF31-222	ENST00000560631	MAMSTR	Q6ZN01	415 aa		10.46	□□□□□ -0.73
RNF31-222	ENST00000560631	SMIM5	Q71RC9	77 aa		10.46	□□□□□ -0.73
RNF31-222	ENST00000560631	MBIP	Q9NS73	344 aa		10.46	□□□□□ -0.73
RNF31-222	ENST00000560631	PCDH10	Q9P2E7	1040 aa		10.46	□□□□□ -0.73
RNF31-222	ENST00000560631	COL15A1	P39059	1388 aa		10.46	□□□□□ -0.74
RNF31-222	ENST00000560631	USP42	Q9H9J4	1324 aa	Known RBP	10.45	□□□□□ -0.74
RNF31-222	ENST00000560631	GYS1	P13807	737 aa		10.45	□□□□□ -0.74
RNF31-222	ENST00000560631	NLGN1	Q8N2Q7	840 aa		10.45	□□□□□ -0.74
RNF31-222	ENST00000560631	NARF	Q9UHQ1	456 aa		10.45	□□□□□ -0.74
RNF31-222	ENST00000560631	LAS1L	Q9Y4W2	734 aa	Known RBP	10.45	□□□□□ -0.74
RNF31-222	ENST00000560631	NBPF26	B4DH59	902 aa		10.44	□□□□□ -0.74
RNF31-222	ENST00000560631	CANX	P27824	592 aa	Known RBP	10.44	□□□□□ -0.74
RNF31-222	ENST00000560631	NBPF10	Q6P3W6	841 aa	Known RBP	10.44	□□□□□ -0.74
RNF31-222	ENST00000560631	NBPF15	Q8N660	670 aa		10.44	□□□□□ -0.74
RNF31-222	ENST00000560631	KIF12	Q96FN5	646 aa		10.44	□□□□□ -0.74
RNF31-222	ENST00000560631	CHMP4A	Q9BY43	222 aa		10.44	□□□□□ -0.74
RNF31-222	ENST00000560631	NUP98	P52948	1817 aa		10.44	□□□□□ -0.74
RNF31-222	ENST00000560631	ZPR1	O75312	459 aa		10.43	□□□□□ -0.74
RNF31-222	ENST00000560631	POLD1	P28340	1107 aa		10.43	□□□□□ -0.74
RNF31-222	ENST00000560631	TM4SF1	P30408	202 aa		10.43	□□□□□ -0.74
RNF31-222	ENST00000560631	DUSP27	Q5VZP5	1158 aa		10.43	□□□□□ -0.74
RNF31-222	ENST00000560631	CLEC4G	Q6UXB4	293 aa		10.43	□□□□□ -0.74
RNF31-222	ENST00000560631	LRP10	Q7Z4F1	713 aa		10.43	□□□□□ -0.74
RNF31-222	ENST00000560631	ARX	Q96QS3	562 aa		10.43	□□□□□ -0.74
RNF31-222	ENST00000560631	BCOR	Q6W2J9	1755 aa		10.43	□□□□□ -0.74
RNF31-222	ENST00000560631	CAMTA2	O94983	1202 aa		10.42	□□□□□ -0.74
RNF31-222	ENST00000560631	PDIA6	Q15084	440 aa		10.42	□□□□□ -0.74
RNF31-222	ENST00000560631	KRT24	Q2M2I5	525 aa		10.42	□□□□□ -0.74
RNF31-222	ENST00000560631	BCL2L12	Q9HB09	334 aa		10.42	□□□□□ -0.74
RNF31-222	ENST00000560631	DDX21	Q9NR30	783 aa	Known RBP eCLIP	10.42	□□□□□ -0.74
RNF31-222	ENST00000560631	SRP68	Q9UHB9	627 aa	Known RBP	10.42	□□□□□ -0.74
RNF31-222	ENST00000560631	AFDN	P55196	1824 aa	Known RBP	10.42	□□□□□ -0.74
RNF31-222	ENST00000560631	KIF13B	Q9NQT8	1826 aa		10.42	□□□□□ -0.74
RNF31-222	ENST00000560631	SCN7A	Q01118	1682 aa		10.41	□□□□□ -0.74
RNF31-222	ENST00000560631	ERVV-1	B6SEH8	477 aa		10.41	□□□□□ -0.74
RNF31-222	ENST00000560631	EIF2S2	P20042	333 aa	Known RBP	10.41	□□□□□ -0.74
RNF31-222	ENST00000560631	FKBP8	Q14318	412 aa		10.41	□□□□□ -0.74
RNF31-222	ENST00000560631	USPL1	Q5W0Q7	1092 aa		10.41	□□□□□ -0.74
RNF31-222	ENST00000560631	MSL1	Q68DK7	614 aa		10.41	□□□□□ -0.74
RNF31-222	ENST00000560631	NPM2	Q86SE8	214 aa	Known RBP	10.41	□□□□□ -0.74
RNF31-222	ENST00000560631	DZIP3	Q86Y13	1208 aa	Known RBP	10.41	□□□□□ -0.74
RNF31-222	ENST00000560631	RASEF	Q8IZ41	740 aa		10.41	□□□□□ -0.74
RNF31-222	ENST00000560631	C8orf58	Q8NAV2	365 aa		10.41	□□□□□ -0.74
RNF31-222	ENST00000560631	SALL2	Q9Y467	1007 aa	Predicted RBP	10.41	□□□□□ -0.74
RNF31-222	ENST00000560631	NRXN2	Q9P2S2	1712 aa		10.41	□□□□□ -0.74
RNF31-222	ENST00000560631	POTEJ	P0CG39	1038 aa		10.4	□□□□□ -0.74
RNF31-222	ENST00000560631	PIP4K2A	P48426	406 aa	Predicted RBP	10.4	□□□□□ -0.74
RNF31-222	ENST00000560631	HDGFL1	Q5TGJ6	251 aa		10.4	□□□□□ -0.74
RNF31-222	ENST00000560631	PPP1R1B	Q9UD71	204 aa	Predicted RBP	10.4	□□□□□ -0.74
RNF31-222	ENST00000560631	TBC1D2B	Q9UPU7	963 aa		10.4	□□□□□ -0.74
RNF31-222	ENST00000560631	FANCI	Q9NVI1	1328 aa		10.39	□□□□□ -0.75
RNF31-222	ENST00000560631	SENP3-EIF4A1	A0A087X0R7	540 aa		10.39	□□□□□ -0.75
RNF31-222	ENST00000560631		E9PSI1	815 aa		10.39	□□□□□ -0.75
RNF31-222	ENST00000560631	POLRMT	O00411	1230 aa	Known RBP	10.39	□□□□□ -0.75
RNF31-222	ENST00000560631	MMP10	P09238	476 aa		10.39	□□□□□ -0.75
RNF31-222	ENST00000560631	GOLGA2	Q08379	1002 aa		10.39	□□□□□ -0.75
RNF31-222	ENST00000560631	SLFN5	Q08AF3	891 aa		10.39	□□□□□ -0.75
RNF31-222	ENST00000560631	CCDC30	Q5VVM6	783 aa		10.39	□□□□□ -0.75
RNF31-222	ENST00000560631	TRMT2A	Q8IZ69	625 aa	Known RBP	10.39	□□□□□ -0.75
RNF31-222	ENST00000560631	TSPYL6	Q8N831	410 aa		10.39	□□□□□ -0.75
RNF31-222	ENST00000560631	TSR2	Q969E8	191 aa	Known RBP	10.39	□□□□□ -0.75
RNF31-222	ENST00000560631	MYH16	Q9H6N6	1097 aa		10.39	□□□□□ -0.75
RNF31-222	ENST00000560631	SCUBE2	Q9NQ36	999 aa		10.39	□□□□□ -0.75
RNF31-222	ENST00000560631	DBF4	Q9UBU7	674 aa	Predicted RBP	10.39	□□□□□ -0.75
RNF31-222	ENST00000560631	MAP3K15	Q6ZN16	1313 aa		10.38	□□□□□ -0.75
RNF31-222	ENST00000560631	VAMP4	O75379	141 aa		10.38	□□□□□ -0.75
RNF31-222	ENST00000560631	ATN1	P54259	1190 aa	Predicted RBP	10.38	□□□□□ -0.75
RNF31-222	ENST00000560631	NFIX	Q14938	502 aa		10.38	□□□□□ -0.75
RNF31-222	ENST00000560631	PROSER3	Q2NL68	480 aa		10.38	□□□□□ -0.75
RNF31-222	ENST00000560631	TWISTNB	Q3B726	338 aa	Predicted RBP	10.38	□□□□□ -0.75
RNF31-222	ENST00000560631	SYT17	Q9BSW7	474 aa		10.38	□□□□□ -0.75
RNF31-222	ENST00000560631	HYPK	Q9NX55	129 aa		10.38	□□□□□ -0.75
RNF31-222	ENST00000560631	ZNF652	Q9Y2D9	606 aa		10.38	□□□□□ -0.75
RNF31-222	ENST00000560631	CD2AP	Q9Y5K6	639 aa		10.38	□□□□□ -0.75
RNF31-222	ENST00000560631	PARP3	Q9Y6F1	533 aa		10.38	□□□□□ -0.75
RNF31-222	ENST00000560631	MYL6B	P14649	208 aa		10.37	□□□□□ -0.75
RNF31-222	ENST00000560631	DDR1	Q08345	913 aa		10.37	□□□□□ -0.75
RNF31-222	ENST00000560631	TBC1D9B	Q66K14	1250 aa		10.37	□□□□□ -0.75
RNF31-222	ENST00000560631	GIGYF2	Q6Y7W6	1299 aa	Known RBP	10.37	□□□□□ -0.75
RNF31-222	ENST00000560631	TTLL7	Q6ZT98	887 aa		10.37	□□□□□ -0.75
RNF31-222	ENST00000560631	FHDC1	Q9C0D6	1143 aa	Predicted RBP	10.37	□□□□□ -0.75
RNF31-222	ENST00000560631	CHPF2	Q9P2E5	772 aa		10.37	□□□□□ -0.75
RNF31-222	ENST00000560631	TRPC6	Q9Y210	931 aa		10.37	□□□□□ -0.75
RNF31-222	ENST00000560631	ZNF330	Q9Y3S2	320 aa	Predicted RBP	10.37	□□□□□ -0.75
RNF31-222	ENST00000560631	ATP10D	Q9P241	1426 aa		10.36	□□□□□ -0.75
RNF31-222	ENST00000560631	ELL2	O00472	640 aa	Predicted RBP	10.36	□□□□□ -0.75
RNF31-222	ENST00000560631	MAP3K13	O43283	966 aa		10.36	□□□□□ -0.75
RNF31-222	ENST00000560631	ANXA1	P04083	346 aa		10.36	□□□□□ -0.75
RNF31-222	ENST00000560631	EXOSC9	Q06265	439 aa	Known RBP	10.36	□□□□□ -0.75
RNF31-222	ENST00000560631	KIF6	Q6ZMV9	814 aa		10.36	□□□□□ -0.75

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