RNA–Protein interactions for RNA: ENST00000560564.1

SPG21-211, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-211ENST00000560564 ZEB1P37275 1124 aaPredicted RBP21.3■■□□□ 1
SPG21-211ENST00000560564 LMOD3Q0VAK6 560 aa21.3■■□□□ 1
SPG21-211ENST00000560564 WDR43Q15061 677 aaKnown RBP eCLIP21.3■■□□□ 1
SPG21-211ENST00000560564 HLFQ16534 295 aa21.3■■□□□ 1
SPG21-211ENST00000560564 TTLL6Q8N841 843 aa21.3■■□□□ 1
SPG21-211ENST00000560564 ZNF526Q8TF50 670 aaPredicted RBP21.3■■□□□ 1
SPG21-211ENST00000560564 CACNA1SQ13698 1873 aa21.3■■□□□ 1
SPG21-211ENST00000560564 FER1L6Q2WGJ9 1857 aa21.29■■□□□ 1
SPG21-211ENST00000560564 C9orf131Q5VYM1 1079 aa21.29■■□□□ 1
SPG21-211ENST00000560564 PDZRN3Q9UPQ7 1066 aa21.29■■□□□ 1
SPG21-211ENST00000560564 SLX4Q8IY92 1834 aa21.29■■□□□ 1
SPG21-211ENST00000560564 ERBB4Q15303 1308 aa21.29■■□□□ 1
SPG21-211ENST00000560564 PDE6BP35913 854 aa21.28■■□□□ 1
SPG21-211ENST00000560564 LRP10Q7Z4F1 713 aa21.28■■□□□ 1
SPG21-211ENST00000560564 TTLL7Q6ZT98 887 aa21.27■■□□□ 1
SPG21-211ENST00000560564 NIP7Q9Y221 180 aaKnown RBP eCLIP21.27■■□□□ 1
SPG21-211ENST00000560564 ERVV-1B6SEH8 477 aa21.26■□□□□ 0.99
SPG21-211ENST00000560564 KIF3CO14782 793 aa21.26■□□□□ 0.99
SPG21-211ENST00000560564 PRELPP51888 382 aa21.26■□□□□ 0.99
SPG21-211ENST00000560564 PDIA6Q15084 440 aa21.26■□□□□ 0.99
SPG21-211ENST00000560564 NEUROD2Q15784 382 aa21.26■□□□□ 0.99
SPG21-211ENST00000560564 MAP3K15Q6ZN16 1313 aa21.26■□□□□ 0.99
SPG21-211ENST00000560564 CHL1O00533 1208 aa21.25■□□□□ 0.99
SPG21-211ENST00000560564 ST5P78524 1137 aa21.25■□□□□ 0.99
SPG21-211ENST00000560564 RASSF7Q02833 373 aa21.25■□□□□ 0.99
SPG21-211ENST00000560564 NBPF5PQ86XG9 351 aaPredicted RBP21.25■□□□□ 0.99
SPG21-211ENST00000560564 TNRC6CQ9HCJ0 1690 aaKnown RBP21.24■□□□□ 0.99
SPG21-211ENST00000560564 DICER1Q9UPY3 1922 aaKnown RBP21.24■□□□□ 0.99
SPG21-211ENST00000560564 KLRG2A4D1S0 409 aaPredicted RBP21.24■□□□□ 0.99
SPG21-211ENST00000560564 NFKBIEO00221 500 aa21.24■□□□□ 0.99
SPG21-211ENST00000560564 SRGNP10124 158 aa21.24■□□□□ 0.99
SPG21-211ENST00000560564 MYL6BP14649 208 aa21.24■□□□□ 0.99
SPG21-211ENST00000560564 NGEFQ8N5V2 710 aa21.24■□□□□ 0.99
SPG21-211ENST00000560564 ZNF622Q969S3 477 aaKnown RBP eCLIP21.23■□□□□ 0.99
SPG21-211ENST00000560564 RNF181Q9P0P0 153 aa21.23■□□□□ 0.99
SPG21-211ENST00000560564 TIAM2Q8IVF5 1701 aa21.23■□□□□ 0.99
SPG21-211ENST00000560564 PROSER3Q2NL68 480 aa21.22■□□□□ 0.99
SPG21-211ENST00000560564 STYK1Q6J9G0 422 aa21.22■□□□□ 0.99
SPG21-211ENST00000560564 KRT24Q2M2I5 525 aa21.21■□□□□ 0.99
SPG21-211ENST00000560564 TPTE2Q6XPS3 522 aa21.21■□□□□ 0.99
SPG21-211ENST00000560564 MASTLQ96GX5 879 aa21.21■□□□□ 0.99
SPG21-211ENST00000560564 UBN2Q6ZU65 1347 aa21.21■□□□□ 0.99
SPG21-211ENST00000560564 ABCC12Q96J65 1359 aa21.21■□□□□ 0.99
SPG21-211ENST00000560564 IBTKQ9P2D0 1353 aaPredicted RBP21.21■□□□□ 0.99
SPG21-211ENST00000560564 ANKRD36CQ5JPF3 1778 aa21.2■□□□□ 0.99
SPG21-211ENST00000560564 NPHP1O15259 732 aa21.2■□□□□ 0.98
SPG21-211ENST00000560564 EIF2S2P20042 333 aaKnown RBP21.2■□□□□ 0.98
SPG21-211ENST00000560564 CCDC184Q52MB2 194 aa21.2■□□□□ 0.98
SPG21-211ENST00000560564 KIF6Q6ZMV9 814 aa21.2■□□□□ 0.98
SPG21-211ENST00000560564 ZBTB3Q9H5J0 574 aa21.2■□□□□ 0.98
SPG21-211ENST00000560564 ZC3H4Q9UPT8 1303 aaKnown RBP21.2■□□□□ 0.98
SPG21-211ENST00000560564 SENP3-EIF4A1A0A087X0R7 540 aa21.19■□□□□ 0.98
SPG21-211ENST00000560564 ANXA1P04083 346 aa21.19■□□□□ 0.98
SPG21-211ENST00000560564 LMNB1P20700 586 aa21.19■□□□□ 0.98
SPG21-211ENST00000560564 PRPF40BQ6NWY9 871 aaKnown RBP21.19■□□□□ 0.98
SPG21-211ENST00000560564 CNKSR1Q969H4 720 aa21.19■□□□□ 0.98
SPG21-211ENST00000560564 NMRK2Q9NPI5 230 aa21.19■□□□□ 0.98
SPG21-211ENST00000560564 RIC1Q4ADV7 1423 aa21.19■□□□□ 0.98
SPG21-211ENST00000560564 FAM177BA6PVY3 158 aa21.18■□□□□ 0.98
SPG21-211ENST00000560564 APAF1O14727 1248 aa21.18■□□□□ 0.98
SPG21-211ENST00000560564 C21orf2O43822 256 aa21.18■□□□□ 0.98
SPG21-211ENST00000560564 GIGYF2Q6Y7W6 1299 aaKnown RBP21.18■□□□□ 0.98
SPG21-211ENST00000560564 ZNF34Q8IZ26 560 aa21.18■□□□□ 0.98
SPG21-211ENST00000560564 C7orf43Q8WVR3 580 aa21.18■□□□□ 0.98
SPG21-211ENST00000560564 ZNF853P0CG23 659 aa21.17■□□□□ 0.98
SPG21-211ENST00000560564 CFAP44Q96MT7 982 aa21.17■□□□□ 0.98
SPG21-211ENST00000560564 LTBP3Q9NS15 1303 aa21.16■□□□□ 0.98
SPG21-211ENST00000560564 NPR1P16066 1061 aa21.16■□□□□ 0.98
SPG21-211ENST00000560564 GPTP24298 496 aa21.16■□□□□ 0.98
SPG21-211ENST00000560564 ZNF219Q9P2Y4 722 aaPredicted RBP21.16■□□□□ 0.98
SPG21-211ENST00000560564 ZNF316A6NFI3 1004 aaPredicted RBP21.15■□□□□ 0.98
SPG21-211ENST00000560564 HOXB7P09629 217 aa21.15■□□□□ 0.98
SPG21-211ENST00000560564 CRY2Q49AN0 593 aa21.15■□□□□ 0.98
SPG21-211ENST00000560564 NUTM1Q86Y26 1132 aa21.15■□□□□ 0.98
SPG21-211ENST00000560564 NYXQ9GZU5 481 aa21.15■□□□□ 0.98
SPG21-211ENST00000560564 LAS1LQ9Y4W2 734 aaKnown RBP21.15■□□□□ 0.98
SPG21-211ENST00000560564 NTSR2O95665 410 aa21.14■□□□□ 0.97
SPG21-211ENST00000560564 ERFEQ4G0M1 354 aa21.14■□□□□ 0.97
SPG21-211ENST00000560564 SUSD4Q5VX71 490 aa21.14■□□□□ 0.97
SPG21-211ENST00000560564 NECTIN2Q92692 538 aa21.14■□□□□ 0.97
SPG21-211ENST00000560564 DDX21Q9NR30 783 aaKnown RBP eCLIP21.14■□□□□ 0.97
SPG21-211ENST00000560564 MBIPQ9NS73 344 aa21.14■□□□□ 0.97
SPG21-211ENST00000560564 SNED1Q8TER0 1413 aa21.13■□□□□ 0.97
SPG21-211ENST00000560564 KDM2BQ8NHM5 1336 aa21.12■□□□□ 0.97
SPG21-211ENST00000560564 TOMM70O94826 608 aa21.12■□□□□ 0.97
SPG21-211ENST00000560564 COPS6Q7L5N1 327 aa21.12■□□□□ 0.97
SPG21-211ENST00000560564 XAGE3Q8WTP9 111 aa21.12■□□□□ 0.97
SPG21-211ENST00000560564 CHPF2Q9P2E5 772 aa21.12■□□□□ 0.97
SPG21-211ENST00000560564 LAMB2P55268 1798 aa21.11■□□□□ 0.97
SPG21-211ENST00000560564 GTF2E1P29083 439 aaPredicted RBP21.11■□□□□ 0.97
SPG21-211ENST00000560564 SOGA3Q5TF21 947 aa21.11■□□□□ 0.97
SPG21-211ENST00000560564 TAOK3Q9H2K8 898 aa21.11■□□□□ 0.97
SPG21-211ENST00000560564 IFT57Q9NWB7 429 aa21.11■□□□□ 0.97
SPG21-211ENST00000560564 HSPA6P17066 643 aa21.1■□□□□ 0.97
SPG21-211ENST00000560564 PARP10Q53GL7 1025 aa21.1■□□□□ 0.97
SPG21-211ENST00000560564 HDGFL1Q5TGJ6 251 aa21.1■□□□□ 0.97
SPG21-211ENST00000560564 WDR90Q96KV7 1748 aa21.09■□□□□ 0.97
SPG21-211ENST00000560564 GLTPD2A6NH11 291 aa21.09■□□□□ 0.97
SPG21-211ENST00000560564 HOXA10P31260 410 aaPredicted RBP21.09■□□□□ 0.97
SPG21-211ENST00000560564 DUSP27Q5VZP5 1158 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms