RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 ARFGEF2Q9Y6D5 1785 aa19.92■□□□□ 0.78
SNRPA1-210ENST00000560383 HSPA6P17066 643 aa19.91■□□□□ 0.78
SNRPA1-210ENST00000560383 CLEC4GQ6UXB4 293 aa19.91■□□□□ 0.78
SNRPA1-210ENST00000560383 C2CD5Q86YS7 1000 aa19.91■□□□□ 0.78
SNRPA1-210ENST00000560383 RNF181Q9P0P0 153 aa19.91■□□□□ 0.78
SNRPA1-210ENST00000560383 TIAM2Q8IVF5 1701 aa19.9■□□□□ 0.78
SNRPA1-210ENST00000560383 PDE6BP35913 854 aa19.9■□□□□ 0.78
SNRPA1-210ENST00000560383 NEUROD2Q15784 382 aa19.9■□□□□ 0.78
SNRPA1-210ENST00000560383 PRR5LQ6MZQ0 368 aa19.9■□□□□ 0.78
SNRPA1-210ENST00000560383 SETDB2Q96T68 719 aa19.9■□□□□ 0.78
SNRPA1-210ENST00000560383 TSPYL4Q9UJ04 414 aa19.9■□□□□ 0.78
SNRPA1-210ENST00000560383 NBPF26B4DH59 902 aa19.89■□□□□ 0.77
SNRPA1-210ENST00000560383 NBPF10Q6P3W6 841 aaKnown RBP19.89■□□□□ 0.77
SNRPA1-210ENST00000560383 NBPF15Q8N660 670 aa19.89■□□□□ 0.77
SNRPA1-210ENST00000560383 CNBD1Q8NA66 436 aa19.89■□□□□ 0.77
SNRPA1-210ENST00000560383 ZNF652Q9Y2D9 606 aa19.89■□□□□ 0.77
SNRPA1-210ENST00000560383 KDM2BQ8NHM5 1336 aa19.88■□□□□ 0.77
SNRPA1-210ENST00000560383 CHL1O00533 1208 aa19.88■□□□□ 0.77
SNRPA1-210ENST00000560383 TOMM70O94826 608 aa19.88■□□□□ 0.77
SNRPA1-210ENST00000560383 FER1L6Q2WGJ9 1857 aa19.88■□□□□ 0.77
SNRPA1-210ENST00000560383 APAF1O14727 1248 aa19.87■□□□□ 0.77
SNRPA1-210ENST00000560383 NMRK2Q9NPI5 230 aa19.87■□□□□ 0.77
SNRPA1-210ENST00000560383 CCDC88AQ3V6T2 1871 aa19.87■□□□□ 0.77
SNRPA1-210ENST00000560383 LMNB1P20700 586 aa19.86■□□□□ 0.77
SNRPA1-210ENST00000560383 PIP4K2AP48426 406 aaPredicted RBP19.86■□□□□ 0.77
SNRPA1-210ENST00000560383 ST5P78524 1137 aa19.86■□□□□ 0.77
SNRPA1-210ENST00000560383 DICER1Q9UPY3 1922 aaKnown RBP19.86■□□□□ 0.77
SNRPA1-210ENST00000560383 CACNA1SQ13698 1873 aa19.86■□□□□ 0.77
SNRPA1-210ENST00000560383 RASSF7Q02833 373 aa19.85■□□□□ 0.77
SNRPA1-210ENST00000560383 ERBB4Q15303 1308 aa19.84■□□□□ 0.77
SNRPA1-210ENST00000560383 NPHP1O15259 732 aa19.84■□□□□ 0.77
SNRPA1-210ENST00000560383 MRS2Q9HD23 443 aa19.84■□□□□ 0.77
SNRPA1-210ENST00000560383 NFKBIEO00221 500 aa19.83■□□□□ 0.77
SNRPA1-210ENST00000560383 STYK1Q6J9G0 422 aa19.83■□□□□ 0.77
SNRPA1-210ENST00000560383 RBM46Q8TBY0 533 aaKnown RBP19.83■□□□□ 0.77
SNRPA1-210ENST00000560383 ZNF622Q969S3 477 aaKnown RBP eCLIP19.83■□□□□ 0.77
SNRPA1-210ENST00000560383 CFAP44Q96MT7 982 aa19.83■□□□□ 0.77
SNRPA1-210ENST00000560383 LTBP3Q9NS15 1303 aa19.82■□□□□ 0.76
SNRPA1-210ENST00000560383 SLX4Q8IY92 1834 aa19.82■□□□□ 0.76
SNRPA1-210ENST00000560383 ZNF853P0CG23 659 aa19.82■□□□□ 0.76
SNRPA1-210ENST00000560383 SRGNP10124 158 aa19.82■□□□□ 0.76
SNRPA1-210ENST00000560383 NUP98P52948 1817 aa19.81■□□□□ 0.76
SNRPA1-210ENST00000560383 PRELPP51888 382 aa19.81■□□□□ 0.76
SNRPA1-210ENST00000560383 NBPF5PQ86XG9 351 aaPredicted RBP19.81■□□□□ 0.76
SNRPA1-210ENST00000560383 CNKSR1Q969H4 720 aa19.81■□□□□ 0.76
SNRPA1-210ENST00000560383 APLP1P51693 650 aa19.8■□□□□ 0.76
SNRPA1-210ENST00000560383 NCBP3Q53F19 620 aaKnown RBP19.8■□□□□ 0.76
SNRPA1-210ENST00000560383 SOGA3Q5TF21 947 aa19.8■□□□□ 0.76
SNRPA1-210ENST00000560383 C16orf71Q8IYS4 520 aaPredicted RBP19.8■□□□□ 0.76
SNRPA1-210ENST00000560383 CCDC24Q8N4L8 307 aa19.8■□□□□ 0.76
SNRPA1-210ENST00000560383 MASTLQ96GX5 879 aa19.8■□□□□ 0.76
SNRPA1-210ENST00000560383 WDR90Q96KV7 1748 aa19.79■□□□□ 0.76
SNRPA1-210ENST00000560383 CALD1Q05682 793 aaKnown RBP19.79■□□□□ 0.76
SNRPA1-210ENST00000560383 PDIA6Q15084 440 aa19.79■□□□□ 0.76
SNRPA1-210ENST00000560383 LRP10Q7Z4F1 713 aa19.79■□□□□ 0.76
SNRPA1-210ENST00000560383 NIP7Q9Y221 180 aaKnown RBP eCLIP19.79■□□□□ 0.76
SNRPA1-210ENST00000560383 KLRG2A4D1S0 409 aaPredicted RBP19.78■□□□□ 0.76
SNRPA1-210ENST00000560383 GLTPD2A6NH11 291 aa19.78■□□□□ 0.76
SNRPA1-210ENST00000560383 ERVV-1B6SEH8 477 aa19.78■□□□□ 0.76
SNRPA1-210ENST00000560383 C21orf2O43822 256 aa19.78■□□□□ 0.76
SNRPA1-210ENST00000560383 HOXB7P09629 217 aa19.78■□□□□ 0.76
SNRPA1-210ENST00000560383 FSTL1Q12841 308 aa19.78■□□□□ 0.76
SNRPA1-210ENST00000560383 CCDC27Q2M243 656 aa19.78■□□□□ 0.76
SNRPA1-210ENST00000560383 PRPF40BQ6NWY9 871 aaKnown RBP19.78■□□□□ 0.76
SNRPA1-210ENST00000560383 TPTE2Q6XPS3 522 aa19.78■□□□□ 0.76
SNRPA1-210ENST00000560383 IFT57Q9NWB7 429 aa19.78■□□□□ 0.76
SNRPA1-210ENST00000560383 MBIPQ9NS73 344 aa19.77■□□□□ 0.76
SNRPA1-210ENST00000560383 LAS1LQ9Y4W2 734 aaKnown RBP19.77■□□□□ 0.76
SNRPA1-210ENST00000560383 IBTKQ9P2D0 1353 aaPredicted RBP19.77■□□□□ 0.76
SNRPA1-210ENST00000560383 MAP3K15Q6ZN16 1313 aa19.76■□□□□ 0.75
SNRPA1-210ENST00000560383 RIC1Q4ADV7 1423 aa19.76■□□□□ 0.75
SNRPA1-210ENST00000560383 NPR1P16066 1061 aa19.76■□□□□ 0.75
SNRPA1-210ENST00000560383 GNAI1P63096 354 aa19.76■□□□□ 0.75
SNRPA1-210ENST00000560383 KRT24Q2M2I5 525 aa19.76■□□□□ 0.75
SNRPA1-210ENST00000560383 RRAGCQ9HB90 399 aa19.76■□□□□ 0.75
SNRPA1-210ENST00000560383 MYL6BP14649 208 aa19.75■□□□□ 0.75
SNRPA1-210ENST00000560383 EIF2S2P20042 333 aaKnown RBP19.75■□□□□ 0.75
SNRPA1-210ENST00000560383 HLFQ16534 295 aa19.75■□□□□ 0.75
SNRPA1-210ENST00000560383 TTLL7Q6ZT98 887 aa19.75■□□□□ 0.75
SNRPA1-210ENST00000560383 TAOK3Q9H2K8 898 aa19.75■□□□□ 0.75
SNRPA1-210ENST00000560383 KIF6Q6ZMV9 814 aa19.74■□□□□ 0.75
SNRPA1-210ENST00000560383 NYXQ9GZU5 481 aa19.74■□□□□ 0.75
SNRPA1-210ENST00000560383 VEGFAP15692 232 aaPredicted RBP19.73■□□□□ 0.75
SNRPA1-210ENST00000560383 PROSER3Q2NL68 480 aa19.73■□□□□ 0.75
SNRPA1-210ENST00000560383 WWC1Q8IX03 1113 aa19.73■□□□□ 0.75
SNRPA1-210ENST00000560383 NGEFQ8N5V2 710 aa19.73■□□□□ 0.75
SNRPA1-210ENST00000560383 C7orf43Q8WVR3 580 aa19.73■□□□□ 0.75
SNRPA1-210ENST00000560383 ERFEQ4G0M1 354 aa19.72■□□□□ 0.75
SNRPA1-210ENST00000560383 DPY19L2Q6NUT2 758 aa19.72■□□□□ 0.75
SNRPA1-210ENST00000560383 SMC1BQ8NDV3 1235 aa19.72■□□□□ 0.75
SNRPA1-210ENST00000560383 DDX21Q9NR30 783 aaKnown RBP eCLIP19.72■□□□□ 0.75
SNRPA1-210ENST00000560383 ZNF219Q9P2Y4 722 aaPredicted RBP19.72■□□□□ 0.75
SNRPA1-210ENST00000560383 ANKRD36CQ5JPF3 1778 aa19.71■□□□□ 0.75
SNRPA1-210ENST00000560383 CRY2Q49AN0 593 aa19.71■□□□□ 0.75
SNRPA1-210ENST00000560383 CCDC93Q567U6 631 aa19.71■□□□□ 0.75
SNRPA1-210ENST00000560383 DUSP27Q5VZP5 1158 aa19.71■□□□□ 0.75
SNRPA1-210ENST00000560383 ABCC12Q96J65 1359 aa19.7■□□□□ 0.74
SNRPA1-210ENST00000560383 ANXA1P04083 346 aa19.7■□□□□ 0.74
SNRPA1-210ENST00000560383 GIGYF2Q6Y7W6 1299 aaKnown RBP19.7■□□□□ 0.74
SNRPA1-210ENST00000560383 IL16Q14005 1332 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms