RNA–Protein interactions for RNA: ENST00000560003.1

SEMA4B-214, Transcript of semaphorin 4B, humanhuman

TSL 3

Gene SEMA4B, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-214ENST00000560003 DUSP27Q5VZP5 1158 aa11.67□□□□□ -0.54
SEMA4B-214ENST00000560003 TBC1D9BQ66K14 1250 aa11.67□□□□□ -0.54
SEMA4B-214ENST00000560003 DIEXFQ68CQ4 756 aaKnown RBP11.67□□□□□ -0.54
SEMA4B-214ENST00000560003 DDX21Q9NR30 783 aaKnown RBP eCLIP11.67□□□□□ -0.54
SEMA4B-214ENST00000560003 HYPKQ9NX55 129 aa11.67□□□□□ -0.54
SEMA4B-214ENST00000560003 PIM2Q9P1W9 311 aa11.67□□□□□ -0.54
SEMA4B-214ENST00000560003 SIPA1L3O60292 1781 aaPredicted RBP11.67□□□□□ -0.54
SEMA4B-214ENST00000560003 UBR2Q8IWV8 1755 aa11.67□□□□□ -0.54
SEMA4B-214ENST00000560003 CARMIL3Q8ND23 1372 aa11.67□□□□□ -0.54
SEMA4B-214ENST00000560003 TJP1Q07157 1748 aa11.66□□□□□ -0.54
SEMA4B-214ENST00000560003 MAP3K15Q6ZN16 1313 aa11.66□□□□□ -0.54
SEMA4B-214ENST00000560003 H0YIN7 160 aa11.66□□□□□ -0.54
SEMA4B-214ENST00000560003 GTF2E1P29083 439 aaPredicted RBP11.66□□□□□ -0.54
SEMA4B-214ENST00000560003 PIP4K2AP48426 406 aaPredicted RBP11.66□□□□□ -0.54
SEMA4B-214ENST00000560003 HSP90AB3PQ58FF7 597 aa11.66□□□□□ -0.54
SEMA4B-214ENST00000560003 NBPF5PQ86XG9 351 aaPredicted RBP11.66□□□□□ -0.54
SEMA4B-214ENST00000560003 BRIP1Q9BX63 1249 aa11.66□□□□□ -0.54
SEMA4B-214ENST00000560003 NYXQ9GZU5 481 aa11.66□□□□□ -0.54
SEMA4B-214ENST00000560003 MYH16Q9H6N6 1097 aa11.66□□□□□ -0.54
SEMA4B-214ENST00000560003 NIP7Q9Y221 180 aaKnown RBP eCLIP11.66□□□□□ -0.54
SEMA4B-214ENST00000560003 A0A0G2JLW4 131 aa11.65□□□□□ -0.54
SEMA4B-214ENST00000560003 GOLGA2Q08379 1002 aa11.65□□□□□ -0.54
SEMA4B-214ENST00000560003 CCDC30Q5VVM6 783 aa11.65□□□□□ -0.54
SEMA4B-214ENST00000560003 CNBD1Q8NA66 436 aa11.65□□□□□ -0.54
SEMA4B-214ENST00000560003 MYH14Q7Z406 1995 aaKnown RBP11.65□□□□□ -0.55
SEMA4B-214ENST00000560003 COL24A1Q17RW2 1714 aa11.64□□□□□ -0.55
SEMA4B-214ENST00000560003 DPEP1P16444 411 aa11.64□□□□□ -0.55
SEMA4B-214ENST00000560003 DALRD3Q5D0E6 543 aaKnown RBP11.64□□□□□ -0.55
SEMA4B-214ENST00000560003 COPS6Q7L5N1 327 aa11.64□□□□□ -0.55
SEMA4B-214ENST00000560003 NECTIN2Q92692 538 aa11.64□□□□□ -0.55
SEMA4B-214ENST00000560003 SALL2Q9Y467 1007 aaPredicted RBP11.64□□□□□ -0.55
SEMA4B-214ENST00000560003 TUBGCP6Q96RT7 1819 aa11.64□□□□□ -0.55
SEMA4B-214ENST00000560003 DDX58O95786 925 aaKnown RBP11.63□□□□□ -0.55
SEMA4B-214ENST00000560003 YY1P25490 414 aa11.63□□□□□ -0.55
SEMA4B-214ENST00000560003 PDIA6Q15084 440 aa11.63□□□□□ -0.55
SEMA4B-214ENST00000560003 PARP10Q53GL7 1025 aa11.63□□□□□ -0.55
SEMA4B-214ENST00000560003 GIGYF2Q6Y7W6 1299 aaKnown RBP11.63□□□□□ -0.55
SEMA4B-214ENST00000560003 PPP1R42Q7Z4L9 355 aa11.63□□□□□ -0.55
SEMA4B-214ENST00000560003 STK31Q9BXU1 1019 aa11.63□□□□□ -0.55
SEMA4B-214ENST00000560003 C10orf71Q711Q0 1435 aa11.62□□□□□ -0.55
SEMA4B-214ENST00000560003 SPDYE4A6NLX3 237 aa11.62□□□□□ -0.55
SEMA4B-214ENST00000560003 ELL2O00472 640 aaPredicted RBP11.62□□□□□ -0.55
SEMA4B-214ENST00000560003 PLCB2Q00722 1185 aa11.62□□□□□ -0.55
SEMA4B-214ENST00000560003 AIMP1Q12904 312 aaKnown RBP11.62□□□□□ -0.55
SEMA4B-214ENST00000560003 HLFQ16534 295 aa11.62□□□□□ -0.55
SEMA4B-214ENST00000560003 TTLL7Q6ZT98 887 aa11.62□□□□□ -0.55
SEMA4B-214ENST00000560003 ANKRD13DQ6ZTN6 518 aa11.62□□□□□ -0.55
SEMA4B-214ENST00000560003 C2CD5Q86YS7 1000 aa11.62□□□□□ -0.55
SEMA4B-214ENST00000560003 C8orf58Q8NAV2 365 aa11.62□□□□□ -0.55
SEMA4B-214ENST00000560003 XAGE3Q8WTP9 111 aa11.62□□□□□ -0.55
SEMA4B-214ENST00000560003 ZBTB3Q9H5J0 574 aa11.62□□□□□ -0.55
SEMA4B-214ENST00000560003 CHPF2Q9P2E5 772 aa11.62□□□□□ -0.55
SEMA4B-214ENST00000560003 BCS1LQ9Y276 419 aa11.62□□□□□ -0.55
SEMA4B-214ENST00000560003 VIRMAQ69YN4 1812 aaKnown RBP11.61□□□□□ -0.55
SEMA4B-214ENST00000560003 DLG5Q8TDM6 1919 aa11.61□□□□□ -0.55
SEMA4B-214ENST00000560003 KRT24Q2M2I5 525 aa11.61□□□□□ -0.55
SEMA4B-214ENST00000560003 TWISTNBQ3B726 338 aaPredicted RBP11.61□□□□□ -0.55
SEMA4B-214ENST00000560003 PRR5LQ6MZQ0 368 aa11.61□□□□□ -0.55
SEMA4B-214ENST00000560003 TTLL6Q8N841 843 aa11.61□□□□□ -0.55
SEMA4B-214ENST00000560003 PLBD2Q8NHP8 589 aa11.61□□□□□ -0.55
SEMA4B-214ENST00000560003 CNKSR1Q969H4 720 aa11.61□□□□□ -0.55
SEMA4B-214ENST00000560003 RNF39Q9H2S5 420 aa11.61□□□□□ -0.55
SEMA4B-214ENST00000560003 HSP90B1P14625 803 aaKnown RBP11.6□□□□□ -0.55
SEMA4B-214ENST00000560003 YBX3P16989 372 aaKnown RBP eCLIP11.6□□□□□ -0.55
SEMA4B-214ENST00000560003 KCNA3P22001 575 aa11.6□□□□□ -0.55
SEMA4B-214ENST00000560003 TCIRG1Q13488 830 aa11.6□□□□□ -0.55
SEMA4B-214ENST00000560003 ARHGAP27Q6ZUM4 889 aa11.6□□□□□ -0.55
SEMA4B-214ENST00000560003 LRP10Q7Z4F1 713 aa11.6□□□□□ -0.55
SEMA4B-214ENST00000560003 RIC3Q7Z5B4 369 aa11.6□□□□□ -0.55
SEMA4B-214ENST00000560003 ZNF34Q8IZ26 560 aa11.6□□□□□ -0.55
SEMA4B-214ENST00000560003 TSR2Q969E8 191 aaKnown RBP11.6□□□□□ -0.55
SEMA4B-214ENST00000560003 RNF123Q5XPI4 1314 aa11.6□□□□□ -0.55
SEMA4B-214ENST00000560003 CHRNA5P30532 468 aa11.59□□□□□ -0.55
SEMA4B-214ENST00000560003 ALDH1B1P30837 517 aa11.59□□□□□ -0.55
SEMA4B-214ENST00000560003 PROSER3Q2NL68 480 aa11.59□□□□□ -0.55
SEMA4B-214ENST00000560003 SOGA3Q5TF21 947 aa11.59□□□□□ -0.55
SEMA4B-214ENST00000560003 STYK1Q6J9G0 422 aa11.59□□□□□ -0.55
SEMA4B-214ENST00000560003 ZNF622Q969S3 477 aaKnown RBP eCLIP11.59□□□□□ -0.55
SEMA4B-214ENST00000560003 MASTLQ96GX5 879 aa11.59□□□□□ -0.55
SEMA4B-214ENST00000560003 UTP14AQ9BVJ6 771 aaKnown RBP11.59□□□□□ -0.55
SEMA4B-214ENST00000560003 C4AP0C0L4 1744 aa11.59□□□□□ -0.55
SEMA4B-214ENST00000560003 KDM3BQ7LBC6 1761 aa11.59□□□□□ -0.55
SEMA4B-214ENST00000560003 PXDNLA1KZ92 1463 aa11.58□□□□□ -0.56
SEMA4B-214ENST00000560003 SENP3-EIF4A1A0A087X0R7 540 aa11.58□□□□□ -0.56
SEMA4B-214ENST00000560003 FAM177BA6PVY3 158 aa11.58□□□□□ -0.56
SEMA4B-214ENST00000560003 E9PSI1 815 aa11.58□□□□□ -0.56
SEMA4B-214ENST00000560003 ANXA1P04083 346 aa11.58□□□□□ -0.56
SEMA4B-214ENST00000560003 NPR1P16066 1061 aa11.58□□□□□ -0.56
SEMA4B-214ENST00000560003 GPTP24298 496 aa11.58□□□□□ -0.56
SEMA4B-214ENST00000560003 ATP10DQ9P241 1426 aa11.58□□□□□ -0.56
SEMA4B-214ENST00000560003 FANCIQ9NVI1 1328 aa11.58□□□□□ -0.56
SEMA4B-214ENST00000560003 IBTKQ9P2D0 1353 aaPredicted RBP11.57□□□□□ -0.56
SEMA4B-214ENST00000560003 KLRG2A4D1S0 409 aaPredicted RBP11.57□□□□□ -0.56
SEMA4B-214ENST00000560003 SRGNP10124 158 aa11.57□□□□□ -0.56
SEMA4B-214ENST00000560003 TRIM28Q13263 835 aaKnown RBP11.57□□□□□ -0.56
SEMA4B-214ENST00000560003 SUSD4Q5VX71 490 aa11.57□□□□□ -0.56
SEMA4B-214ENST00000560003 NLRP3Q96P20 1036 aa11.57□□□□□ -0.56
SEMA4B-214ENST00000560003 TMX4Q9H1E5 349 aaPredicted RBP11.57□□□□□ -0.56
SEMA4B-214ENST00000560003 EXOSC9Q06265 439 aaKnown RBP11.56□□□□□ -0.56
SEMA4B-214ENST00000560003 NEXNQ0ZGT2 675 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms