RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 IFT57Q9NWB7 429 aa5.67□□□□□ -1.5
SNX1-205ENST00000559339 WWC3Q9ULE0 1092 aa5.67□□□□□ -1.5
SNX1-205ENST00000559339 PDZRN3Q9UPQ7 1066 aa5.67□□□□□ -1.5
SNX1-205ENST00000559339 BCS1LQ9Y276 419 aa5.67□□□□□ -1.5
SNX1-205ENST00000559339 COL5A3P25940 1745 aaPredicted RBP5.67□□□□□ -1.5
SNX1-205ENST00000559339 TUBGCP6Q96RT7 1819 aa5.67□□□□□ -1.5
SNX1-205ENST00000559339 CICQ96RK0 1608 aaPredicted RBP5.66□□□□□ -1.5
SNX1-205ENST00000559339 DPEP1P16444 411 aa5.66□□□□□ -1.5
SNX1-205ENST00000559339 YBX3P16989 372 aaKnown RBP eCLIP5.66□□□□□ -1.5
SNX1-205ENST00000559339 CCDC184Q52MB2 194 aa5.66□□□□□ -1.5
SNX1-205ENST00000559339 DALRD3Q5D0E6 543 aaKnown RBP5.66□□□□□ -1.5
SNX1-205ENST00000559339 HDGFL1Q5TGJ6 251 aa5.66□□□□□ -1.5
SNX1-205ENST00000559339 BRIP1Q9BX63 1249 aa5.66□□□□□ -1.5
SNX1-205ENST00000559339 NYXQ9GZU5 481 aa5.66□□□□□ -1.5
SNX1-205ENST00000559339 BCL2L12Q9HB09 334 aa5.66□□□□□ -1.5
SNX1-205ENST00000559339 MBIPQ9NS73 344 aa5.66□□□□□ -1.5
SNX1-205ENST00000559339 DBF4Q9UBU7 674 aaPredicted RBP5.66□□□□□ -1.5
SNX1-205ENST00000559339 NIP7Q9Y221 180 aaKnown RBP eCLIP5.66□□□□□ -1.5
SNX1-205ENST00000559339 MAP3K15Q6ZN16 1313 aa5.66□□□□□ -1.5
SNX1-205ENST00000559339 MYH14Q7Z406 1995 aaKnown RBP5.66□□□□□ -1.5
SNX1-205ENST00000559339 C10orf71Q711Q0 1435 aa5.65□□□□□ -1.5
SNX1-205ENST00000559339 TJP1Q07157 1748 aa5.65□□□□□ -1.5
SNX1-205ENST00000559339 UBR2Q8IWV8 1755 aa5.65□□□□□ -1.5
SNX1-205ENST00000559339 ZNF853P0CG23 659 aa5.65□□□□□ -1.5
SNX1-205ENST00000559339 AIMP1Q12904 312 aaKnown RBP5.65□□□□□ -1.5
SNX1-205ENST00000559339 HSP90AB3PQ58FF7 597 aa5.65□□□□□ -1.5
SNX1-205ENST00000559339 DUSP27Q5VZP5 1158 aa5.65□□□□□ -1.5
SNX1-205ENST00000559339 PPP1R42Q7Z4L9 355 aa5.65□□□□□ -1.5
SNX1-205ENST00000559339 WWC1Q8IX03 1113 aa5.65□□□□□ -1.5
SNX1-205ENST00000559339 TTLL6Q8N841 843 aa5.65□□□□□ -1.5
SNX1-205ENST00000559339 NECTIN2Q92692 538 aa5.65□□□□□ -1.5
SNX1-205ENST00000559339 ZBTB3Q9H5J0 574 aa5.65□□□□□ -1.5
SNX1-205ENST00000559339 DDX21Q9NR30 783 aaKnown RBP eCLIP5.65□□□□□ -1.5
SNX1-205ENST00000559339 HYPKQ9NX55 129 aa5.65□□□□□ -1.5
SNX1-205ENST00000559339 PXDNLA1KZ92 1463 aa5.64□□□□□ -1.51
SNX1-205ENST00000559339 ELL2O00472 640 aaPredicted RBP5.64□□□□□ -1.51
SNX1-205ENST00000559339 KCNA3P22001 575 aa5.64□□□□□ -1.51
SNX1-205ENST00000559339 CHRNA5P30532 468 aa5.64□□□□□ -1.51
SNX1-205ENST00000559339 CACNB1Q02641 598 aaPredicted RBP5.64□□□□□ -1.51
SNX1-205ENST00000559339 HLFQ16534 295 aa5.64□□□□□ -1.51
SNX1-205ENST00000559339 PARP10Q53GL7 1025 aa5.64□□□□□ -1.51
SNX1-205ENST00000559339 CCDC30Q5VVM6 783 aa5.64□□□□□ -1.51
SNX1-205ENST00000559339 PRR5LQ6MZQ0 368 aa5.64□□□□□ -1.51
SNX1-205ENST00000559339 GIGYF2Q6Y7W6 1299 aaKnown RBP5.64□□□□□ -1.51
SNX1-205ENST00000559339 ANKRD13DQ6ZTN6 518 aa5.64□□□□□ -1.51
SNX1-205ENST00000559339 ARHGAP27Q6ZUM4 889 aa5.64□□□□□ -1.51
SNX1-205ENST00000559339 COPS6Q7L5N1 327 aa5.64□□□□□ -1.51
SNX1-205ENST00000559339 C2CD5Q86YS7 1000 aa5.64□□□□□ -1.51
SNX1-205ENST00000559339 WDR63Q8IWG1 891 aa5.64□□□□□ -1.51
SNX1-205ENST00000559339 CNKSR1Q969H4 720 aa5.64□□□□□ -1.51
SNX1-205ENST00000559339 ZNF622Q969S3 477 aaKnown RBP eCLIP5.64□□□□□ -1.51
SNX1-205ENST00000559339 STK31Q9BXU1 1019 aa5.64□□□□□ -1.51
SNX1-205ENST00000559339 MYH16Q9H6N6 1097 aa5.64□□□□□ -1.51
SNX1-205ENST00000559339 CHPF2Q9P2E5 772 aa5.64□□□□□ -1.51
SNX1-205ENST00000559339 SALL2Q9Y467 1007 aaPredicted RBP5.64□□□□□ -1.51
SNX1-205ENST00000559339 COL24A1Q17RW2 1714 aa5.64□□□□□ -1.51
SNX1-205ENST00000559339 IL16Q14005 1332 aa5.64□□□□□ -1.51
SNX1-205ENST00000559339 SIPA1L3O60292 1781 aaPredicted RBP5.64□□□□□ -1.51
SNX1-205ENST00000559339 C4AP0C0L4 1744 aa5.63□□□□□ -1.51
SNX1-205ENST00000559339 SENP3-EIF4A1A0A087X0R7 540 aa5.63□□□□□ -1.51
SNX1-205ENST00000559339 FAM177BA6PVY3 158 aa5.63□□□□□ -1.51
SNX1-205ENST00000559339 CCER2I3L3R5 266 aa5.63□□□□□ -1.51
SNX1-205ENST00000559339 DDX58O95786 925 aaKnown RBP5.63□□□□□ -1.51
SNX1-205ENST00000559339 GOLGA2Q08379 1002 aa5.63□□□□□ -1.51
SNX1-205ENST00000559339 PDIA6Q15084 440 aa5.63□□□□□ -1.51
SNX1-205ENST00000559339 KRT24Q2M2I5 525 aa5.63□□□□□ -1.51
SNX1-205ENST00000559339 SOGA3Q5TF21 947 aa5.63□□□□□ -1.51
SNX1-205ENST00000559339 TTLL7Q6ZT98 887 aa5.63□□□□□ -1.51
SNX1-205ENST00000559339 PLBD2Q8NHP8 589 aa5.63□□□□□ -1.51
SNX1-205ENST00000559339 XAGE3Q8WTP9 111 aa5.63□□□□□ -1.51
SNX1-205ENST00000559339 MASTLQ96GX5 879 aa5.63□□□□□ -1.51
SNX1-205ENST00000559339 UTP14AQ9BVJ6 771 aaKnown RBP5.63□□□□□ -1.51
SNX1-205ENST00000559339 TMX4Q9H1E5 349 aaPredicted RBP5.63□□□□□ -1.51
SNX1-205ENST00000559339 VIRMAQ69YN4 1812 aaKnown RBP5.62□□□□□ -1.51
SNX1-205ENST00000559339 ANXA1P04083 346 aa5.62□□□□□ -1.51
SNX1-205ENST00000559339 SRGNP10124 158 aa5.62□□□□□ -1.51
SNX1-205ENST00000559339 HSP90B1P14625 803 aaKnown RBP5.62□□□□□ -1.51
SNX1-205ENST00000559339 NPR1P16066 1061 aa5.62□□□□□ -1.51
SNX1-205ENST00000559339 GPTP24298 496 aa5.62□□□□□ -1.51
SNX1-205ENST00000559339 ALDH1B1P30837 517 aa5.62□□□□□ -1.51
SNX1-205ENST00000559339 TCIRG1Q13488 830 aa5.62□□□□□ -1.51
SNX1-205ENST00000559339 PROSER3Q2NL68 480 aa5.62□□□□□ -1.51
SNX1-205ENST00000559339 TWISTNBQ3B726 338 aaPredicted RBP5.62□□□□□ -1.51
SNX1-205ENST00000559339 DIEXFQ68CQ4 756 aaKnown RBP5.62□□□□□ -1.51
SNX1-205ENST00000559339 STYK1Q6J9G0 422 aa5.62□□□□□ -1.51
SNX1-205ENST00000559339 LRP10Q7Z4F1 713 aa5.62□□□□□ -1.51
SNX1-205ENST00000559339 RIC3Q7Z5B4 369 aa5.62□□□□□ -1.51
SNX1-205ENST00000559339 ZNF34Q8IZ26 560 aa5.62□□□□□ -1.51
SNX1-205ENST00000559339 CCDC24Q8N4L8 307 aa5.62□□□□□ -1.51
SNX1-205ENST00000559339 ZNF784Q8NCA9 323 aaPredicted RBP5.62□□□□□ -1.51
SNX1-205ENST00000559339 RPGRQ92834 1020 aaKnown RBP5.62□□□□□ -1.51
SNX1-205ENST00000559339 NLRP3Q96P20 1036 aa5.62□□□□□ -1.51
SNX1-205ENST00000559339 RNF123Q5XPI4 1314 aa5.62□□□□□ -1.51
SNX1-205ENST00000559339 ATP10DQ9P241 1426 aa5.62□□□□□ -1.51
SNX1-205ENST00000559339 DLG5Q8TDM6 1919 aa5.62□□□□□ -1.51
SNX1-205ENST00000559339 KLRG2A4D1S0 409 aaPredicted RBP5.61□□□□□ -1.51
SNX1-205ENST00000559339 NEXNQ0ZGT2 675 aa5.61□□□□□ -1.51
SNX1-205ENST00000559339 SUSD4Q5VX71 490 aa5.61□□□□□ -1.51
SNX1-205ENST00000559339 KDM3BQ7LBC6 1761 aa5.61□□□□□ -1.51
SNX1-205ENST00000559339 NUTM1Q86Y26 1132 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 804.9 ms