RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 ERBB4Q15303 1308 aa24.3■■□□□ 1.48
CASC4-209ENST00000559222 WDR63Q8IWG1 891 aa24.29■■□□□ 1.48
CASC4-209ENST00000559222 ANKRD31Q8N7Z5 1873 aa24.29■■□□□ 1.48
CASC4-209ENST00000559222 CARMIL3Q8ND23 1372 aa24.28■■□□□ 1.48
CASC4-209ENST00000559222 HOXB7P09629 217 aa24.27■■□□□ 1.48
CASC4-209ENST00000559222 NPM2Q86SE8 214 aaKnown RBP24.27■■□□□ 1.48
CASC4-209ENST00000559222 ANKRD36CQ5JPF3 1778 aa24.26■■□□□ 1.47
CASC4-209ENST00000559222 PXDNLA1KZ92 1463 aa24.26■■□□□ 1.47
CASC4-209ENST00000559222 ZBTB3Q9H5J0 574 aa24.26■■□□□ 1.47
CASC4-209ENST00000559222 CD2APQ9Y5K6 639 aa24.26■■□□□ 1.47
CASC4-209ENST00000559222 BRCA1P38398 1863 aaKnown RBP24.26■■□□□ 1.47
CASC4-209ENST00000559222 DDX21Q9NR30 783 aaKnown RBP eCLIP24.25■■□□□ 1.47
CASC4-209ENST00000559222 WWC3Q9ULE0 1092 aa24.25■■□□□ 1.47
CASC4-209ENST00000559222 MAP3K15Q6ZN16 1313 aa24.25■■□□□ 1.47
CASC4-209ENST00000559222 ARFGEF2Q9Y6D5 1785 aa24.24■■□□□ 1.47
CASC4-209ENST00000559222 SERPINB2P05120 415 aa24.24■■□□□ 1.47
CASC4-209ENST00000559222 CCDC24Q8N4L8 307 aa24.24■■□□□ 1.47
CASC4-209ENST00000559222 XAGE3Q8WTP9 111 aa24.24■■□□□ 1.47
CASC4-209ENST00000559222 COL11A2P13942 1736 aaPredicted RBP24.24■■□□□ 1.47
CASC4-209ENST00000559222 TCERG1O14776 1098 aaKnown RBP24.23■■□□□ 1.47
CASC4-209ENST00000559222 AIMP1Q12904 312 aaKnown RBP24.23■■□□□ 1.47
CASC4-209ENST00000559222 EXOSC9Q06265 439 aaKnown RBP24.22■■□□□ 1.47
CASC4-209ENST00000559222 COPS6Q7L5N1 327 aa24.22■■□□□ 1.47
CASC4-209ENST00000559222 KIF6Q6ZMV9 814 aa24.21■■□□□ 1.47
CASC4-209ENST00000559222 DLEC1Q9Y238 1755 aa24.21■■□□□ 1.47
CASC4-209ENST00000559222 TWISTNBQ3B726 338 aaPredicted RBP24.2■■□□□ 1.46
CASC4-209ENST00000559222 TNRC6CQ9HCJ0 1690 aaKnown RBP24.2■■□□□ 1.46
CASC4-209ENST00000559222 ATP10DQ9P241 1426 aa24.19■■□□□ 1.46
CASC4-209ENST00000559222 UBN2Q6ZU65 1347 aa24.19■■□□□ 1.46
CASC4-209ENST00000559222 ERVV-1B6SEH8 477 aa24.19■■□□□ 1.46
CASC4-209ENST00000559222 CLEC4GQ6UXB4 293 aa24.19■■□□□ 1.46
CASC4-209ENST00000559222 CDCA7LQ96GN5 454 aa24.19■■□□□ 1.46
CASC4-209ENST00000559222 PHAXQ9H814 394 aaKnown RBP24.19■■□□□ 1.46
CASC4-209ENST00000559222 DBF4Q9UBU7 674 aaPredicted RBP24.19■■□□□ 1.46
CASC4-209ENST00000559222 NIP7Q9Y221 180 aaKnown RBP eCLIP24.19■■□□□ 1.46
CASC4-209ENST00000559222 A0A0G2JLW4 131 aa24.18■■□□□ 1.46
CASC4-209ENST00000559222 FAM177BA6PVY3 158 aa24.18■■□□□ 1.46
CASC4-209ENST00000559222 PRR5LQ6MZQ0 368 aa24.18■■□□□ 1.46
CASC4-209ENST00000559222 SETDB2Q96T68 719 aa24.18■■□□□ 1.46
CASC4-209ENST00000559222 ZNF652Q9Y2D9 606 aa24.18■■□□□ 1.46
CASC4-209ENST00000559222 DPEP1P16444 411 aa24.17■■□□□ 1.46
CASC4-209ENST00000559222 YBX3P16989 372 aaKnown RBP eCLIP24.17■■□□□ 1.46
CASC4-209ENST00000559222 GPTP24298 496 aa24.17■■□□□ 1.46
CASC4-209ENST00000559222 PELP1Q8IZL8 1130 aaKnown RBP24.17■■□□□ 1.46
CASC4-209ENST00000559222 CHRNA5P30532 468 aa24.16■■□□□ 1.46
CASC4-209ENST00000559222 GOLGA2Q08379 1002 aa24.16■■□□□ 1.46
CASC4-209ENST00000559222 GIGYF2Q6Y7W6 1299 aaKnown RBP24.16■■□□□ 1.46
CASC4-209ENST00000559222 MYH16Q9H6N6 1097 aa24.15■■□□□ 1.46
CASC4-209ENST00000559222 CACNA1SQ13698 1873 aa24.15■■□□□ 1.46
CASC4-209ENST00000559222 RGL2O15211 777 aa24.14■■□□□ 1.45
CASC4-209ENST00000559222 VAMP4O75379 141 aa24.14■■□□□ 1.45
CASC4-209ENST00000559222 KCNA3P22001 575 aa24.14■■□□□ 1.45
CASC4-209ENST00000559222 CCDC30Q5VVM6 783 aa24.14■■□□□ 1.45
CASC4-209ENST00000559222 ZNF428Q96B54 188 aa24.14■■□□□ 1.45
CASC4-209ENST00000559222 HYPKQ9NX55 129 aa24.14■■□□□ 1.45
CASC4-209ENST00000559222 SLFN5Q08AF3 891 aa24.13■■□□□ 1.45
CASC4-209ENST00000559222 G2E3Q7L622 706 aa24.13■■□□□ 1.45
CASC4-209ENST00000559222 ZNF34Q8IZ26 560 aa24.13■■□□□ 1.45
CASC4-209ENST00000559222 CNBD1Q8NA66 436 aa24.13■■□□□ 1.45
CASC4-209ENST00000559222 ABCC12Q96J65 1359 aa24.13■■□□□ 1.45
CASC4-209ENST00000559222 TGFB2P61812 414 aa24.12■■□□□ 1.45
CASC4-209ENST00000559222 NBPF5PQ86XG9 351 aaPredicted RBP24.12■■□□□ 1.45
CASC4-209ENST00000559222 SUSD4Q5VX71 490 aa24.11■■□□□ 1.45
CASC4-209ENST00000559222 CACNA1FO60840 1977 aa24.11■■□□□ 1.45
CASC4-209ENST00000559222 ARFGEF1Q9Y6D6 1849 aa24.1■■□□□ 1.45
CASC4-209ENST00000559222 GPR162Q16538 588 aa24.1■■□□□ 1.45
CASC4-209ENST00000559222 NUTM1Q86Y26 1132 aa24.1■■□□□ 1.45
CASC4-209ENST00000559222 PLBD2Q8NHP8 589 aa24.1■■□□□ 1.45
CASC4-209ENST00000559222 LAMB2P55268 1798 aa24.09■■□□□ 1.45
CASC4-209ENST00000559222 E9PSI1 815 aa24.09■■□□□ 1.45
CASC4-209ENST00000559222 HNRNPUQ00839 825 aaKnown RBP eCLIP24.09■■□□□ 1.45
CASC4-209ENST00000559222 ANKRD13DQ6ZTN6 518 aa24.09■■□□□ 1.45
CASC4-209ENST00000559222 GOLGB1Q14789 3259 aaKnown RBP24.08■■□□□ 1.45
CASC4-209ENST00000559222 NTSR2O95665 410 aa24.08■■□□□ 1.45
CASC4-209ENST00000559222 ADCY9O60503 1353 aa24.07■■□□□ 1.44
CASC4-209ENST00000559222 NPHP1O15259 732 aa24.07■■□□□ 1.44
CASC4-209ENST00000559222 TCIRG1Q13488 830 aa24.07■■□□□ 1.44
CASC4-209ENST00000559222 ERFEQ4G0M1 354 aa24.07■■□□□ 1.44
CASC4-209ENST00000559222 C2CD5Q86YS7 1000 aa24.07■■□□□ 1.44
CASC4-209ENST00000559222 TRMT2AQ8IZ69 625 aaKnown RBP24.07■■□□□ 1.44
CASC4-209ENST00000559222 DDX60Q8IY21 1712 aaKnown RBP24.07■■□□□ 1.44
CASC4-209ENST00000559222 ATP5J2-PTCD1G3V325 749 aa24.06■■□□□ 1.44
CASC4-209ENST00000559222 SLC4A2P04920 1241 aa24.06■■□□□ 1.44
CASC4-209ENST00000559222 ST5P78524 1137 aa24.06■■□□□ 1.44
CASC4-209ENST00000559222 BRIP1Q9BX63 1249 aa24.06■■□□□ 1.44
CASC4-209ENST00000559222 STK31Q9BXU1 1019 aa24.06■■□□□ 1.44
CASC4-209ENST00000559222 IBTKQ9P2D0 1353 aaPredicted RBP24.05■■□□□ 1.44
CASC4-209ENST00000559222 YY1P25490 414 aa24.05■■□□□ 1.44
CASC4-209ENST00000559222 NLRP10Q86W26 655 aa24.05■■□□□ 1.44
CASC4-209ENST00000559222 SYNE4Q8N205 404 aa24.05■■□□□ 1.44
CASC4-209ENST00000559222 CHD4Q14839 1912 aa24.04■■□□□ 1.44
CASC4-209ENST00000559222 ISCA1Q9BUE6 129 aa24.04■■□□□ 1.44
CASC4-209ENST00000559222 BCS1LQ9Y276 419 aa24.04■■□□□ 1.44
CASC4-209ENST00000559222 SLX4Q8IY92 1834 aa24.03■■□□□ 1.44
CASC4-209ENST00000559222 TPTE2Q6XPS3 522 aa24.03■■□□□ 1.44
CASC4-209ENST00000559222 C3orf67Q6ZVT6 689 aa24.03■■□□□ 1.44
CASC4-209ENST00000559222 RIC3Q7Z5B4 369 aa24.03■■□□□ 1.44
CASC4-209ENST00000559222 PARP10Q53GL7 1025 aa24.02■■□□□ 1.44
CASC4-209ENST00000559222 HSP90AB3PQ58FF7 597 aa24.02■■□□□ 1.44
CASC4-209ENST00000559222 MYD88Q99836 296 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms