RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 ALDH1L2Q3SY69 923 aa9.77□□□□□ -0.85
LRRC28-211ENST00000558890 CENPQQ7L2Z9 268 aaPredicted RBP9.77□□□□□ -0.85
LRRC28-211ENST00000558890 AK7Q96M32 723 aa9.77□□□□□ -0.85
LRRC28-211ENST00000558890 BCL2L12Q9HB09 334 aa9.77□□□□□ -0.85
LRRC28-211ENST00000558890 SPON1Q9HCB6 807 aa9.77□□□□□ -0.85
LRRC28-211ENST00000558890 N4BP2Q86UW6 1770 aaPredicted RBP9.76□□□□□ -0.85
LRRC28-211ENST00000558890 GYS1P13807 737 aa9.76□□□□□ -0.85
LRRC28-211ENST00000558890 KRT24Q2M2I5 525 aa9.76□□□□□ -0.85
LRRC28-211ENST00000558890 TRAPPC3LQ5T215 181 aa9.76□□□□□ -0.85
LRRC28-211ENST00000558890 RTCBQ9Y3I0 505 aaKnown RBP9.76□□□□□ -0.85
LRRC28-211ENST00000558890 IBTKQ9P2D0 1353 aaPredicted RBP9.75□□□□□ -0.85
LRRC28-211ENST00000558890 STARD3NLO95772 234 aa9.75□□□□□ -0.85
LRRC28-211ENST00000558890 PDE3AQ14432 1141 aa9.75□□□□□ -0.85
LRRC28-211ENST00000558890 C20orf194Q5TEA3 1177 aa9.75□□□□□ -0.85
LRRC28-211ENST00000558890 GOLGB1Q14789 3259 aaKnown RBP9.75□□□□□ -0.85
LRRC28-211ENST00000558890 LRP5O75197 1615 aa9.74□□□□□ -0.85
LRRC28-211ENST00000558890 PHF14O94880 888 aa9.74□□□□□ -0.85
LRRC28-211ENST00000558890 TM4SF1P30408 202 aa9.74□□□□□ -0.85
LRRC28-211ENST00000558890 IL6STP40189 918 aaPredicted RBP9.74□□□□□ -0.85
LRRC28-211ENST00000558890 TWISTNBQ3B726 338 aaPredicted RBP9.74□□□□□ -0.85
LRRC28-211ENST00000558890 SRP68Q9UHB9 627 aaKnown RBP9.74□□□□□ -0.85
LRRC28-211ENST00000558890 VAMP4O75379 141 aa9.73□□□□□ -0.85
LRRC28-211ENST00000558890 PIP4K2AP48426 406 aaPredicted RBP9.73□□□□□ -0.85
LRRC28-211ENST00000558890 CCDC30Q5VVM6 783 aa9.73□□□□□ -0.85
LRRC28-211ENST00000558890 NARFQ9UHQ1 456 aa9.73□□□□□ -0.85
LRRC28-211ENST00000558890 KDM2BQ8NHM5 1336 aa9.73□□□□□ -0.85
LRRC28-211ENST00000558890 KIF16BQ96L93 1317 aa9.73□□□□□ -0.85
LRRC28-211ENST00000558890 USP42Q9H9J4 1324 aaKnown RBP9.73□□□□□ -0.85
LRRC28-211ENST00000558890 BCORQ6W2J9 1755 aa9.73□□□□□ -0.85
LRRC28-211ENST00000558890 PXDNLA1KZ92 1463 aa9.72□□□□□ -0.85
LRRC28-211ENST00000558890 SCN7AQ01118 1682 aa9.72□□□□□ -0.85
LRRC28-211ENST00000558890 CAMTA2O94983 1202 aa9.72□□□□□ -0.85
LRRC28-211ENST00000558890 EXOSC9Q06265 439 aaKnown RBP9.72□□□□□ -0.85
LRRC28-211ENST00000558890 AAMPQ13685 434 aa9.72□□□□□ -0.85
LRRC28-211ENST00000558890 MSL1Q68DK7 614 aa9.72□□□□□ -0.85
LRRC28-211ENST00000558890 C8orf58Q8NAV2 365 aa9.72□□□□□ -0.85
LRRC28-211ENST00000558890 TSR2Q969E8 191 aaKnown RBP9.72□□□□□ -0.85
LRRC28-211ENST00000558890 DBF4Q9UBU7 674 aaPredicted RBP9.72□□□□□ -0.85
LRRC28-211ENST00000558890 NOP58Q9Y2X3 529 aaKnown RBP9.72□□□□□ -0.85
LRRC28-211ENST00000558890 LAS1LQ9Y4W2 734 aaKnown RBP9.72□□□□□ -0.85
LRRC28-211ENST00000558890 BCAR3O75815 825 aa9.71□□□□□ -0.86
LRRC28-211ENST00000558890 PDE4AP27815 886 aa9.71□□□□□ -0.86
LRRC28-211ENST00000558890 RFC4P35249 363 aa9.71□□□□□ -0.86
LRRC28-211ENST00000558890 DDR1Q08345 913 aa9.71□□□□□ -0.86
LRRC28-211ENST00000558890 PROSER3Q2NL68 480 aa9.71□□□□□ -0.86
LRRC28-211ENST00000558890 USPL1Q5W0Q7 1092 aa9.71□□□□□ -0.86
LRRC28-211ENST00000558890 NLGN1Q8N2Q7 840 aa9.71□□□□□ -0.86
LRRC28-211ENST00000558890 TSPYL6Q8N831 410 aa9.71□□□□□ -0.86
LRRC28-211ENST00000558890 ARHGAP45Q92619 1136 aa9.71□□□□□ -0.86
LRRC28-211ENST00000558890 ARXQ96QS3 562 aa9.71□□□□□ -0.86
LRRC28-211ENST00000558890 DDX21Q9NR30 783 aaKnown RBP eCLIP9.71□□□□□ -0.86
LRRC28-211ENST00000558890 COL15A1P39059 1388 aa9.71□□□□□ -0.86
LRRC28-211ENST00000558890 C4AP0C0L4 1744 aa9.7□□□□□ -0.86
LRRC28-211ENST00000558890 ANKRD36CQ5JPF3 1778 aa9.7□□□□□ -0.86
LRRC28-211ENST00000558890 HDGFL1Q5TGJ6 251 aa9.7□□□□□ -0.86
LRRC28-211ENST00000558890 IPO9Q96P70 1041 aaKnown RBP9.7□□□□□ -0.86
LRRC28-211ENST00000558890 SYT17Q9BSW7 474 aa9.7□□□□□ -0.86
LRRC28-211ENST00000558890 STK31Q9BXU1 1019 aa9.7□□□□□ -0.86
LRRC28-211ENST00000558890 HYPKQ9NX55 129 aa9.7□□□□□ -0.86
LRRC28-211ENST00000558890 TBC1D2BQ9UPU7 963 aa9.7□□□□□ -0.86
LRRC28-211ENST00000558890 PTPRCP08575 1304 aa9.7□□□□□ -0.86
LRRC28-211ENST00000558890 A0A087WZG4 1122 aa9.69□□□□□ -0.86
LRRC28-211ENST00000558890 POLRMTO00411 1230 aaKnown RBP9.69□□□□□ -0.86
LRRC28-211ENST00000558890 MMP10P09238 476 aa9.69□□□□□ -0.86
LRRC28-211ENST00000558890 RARSP54136 660 aaKnown RBP9.69□□□□□ -0.86
LRRC28-211ENST00000558890 NFIXQ14938 502 aa9.69□□□□□ -0.86
LRRC28-211ENST00000558890 TTLL7Q6ZT98 887 aa9.69□□□□□ -0.86
LRRC28-211ENST00000558890 BACH2Q9BYV9 841 aa9.69□□□□□ -0.86
LRRC28-211ENST00000558890 FHDC1Q9C0D6 1143 aaPredicted RBP9.69□□□□□ -0.86
LRRC28-211ENST00000558890 ARFGEF2Q9Y6D5 1785 aa9.69□□□□□ -0.86
LRRC28-211ENST00000558890 ANXA1P04083 346 aa9.68□□□□□ -0.86
LRRC28-211ENST00000558890 EIF2S2P20042 333 aaKnown RBP9.68□□□□□ -0.86
LRRC28-211ENST00000558890 POLA2Q14181 598 aa9.68□□□□□ -0.86
LRRC28-211ENST00000558890 HLFQ16534 295 aa9.68□□□□□ -0.86
LRRC28-211ENST00000558890 CLEC4GQ6UXB4 293 aa9.68□□□□□ -0.86
LRRC28-211ENST00000558890 FRAT1Q92837 279 aaPredicted RBP9.68□□□□□ -0.86
LRRC28-211ENST00000558890 CLUAP1Q96AJ1 413 aa9.68□□□□□ -0.86
LRRC28-211ENST00000558890 ATP10DQ9P241 1426 aa9.67□□□□□ -0.86
LRRC28-211ENST00000558890 ERVV-1B6SEH8 477 aa9.67□□□□□ -0.86
LRRC28-211ENST00000558890 ELL2O00472 640 aaPredicted RBP9.67□□□□□ -0.86
LRRC28-211ENST00000558890 IPO8O15397 1037 aaKnown RBP9.67□□□□□ -0.86
LRRC28-211ENST00000558890 ZPR1O75312 459 aa9.67□□□□□ -0.86
LRRC28-211ENST00000558890 POLD1P28340 1107 aa9.67□□□□□ -0.86
LRRC28-211ENST00000558890 TBC1D9BQ66K14 1250 aa9.67□□□□□ -0.86
LRRC28-211ENST00000558890 NPM2Q86SE8 214 aaKnown RBP9.67□□□□□ -0.86
LRRC28-211ENST00000558890 DZIP3Q86Y13 1208 aaKnown RBP9.67□□□□□ -0.86
LRRC28-211ENST00000558890 DDRGK1Q96HY6 314 aa9.67□□□□□ -0.86
LRRC28-211ENST00000558890 ZBTB47Q9UFB7 747 aaPredicted RBP9.67□□□□□ -0.86
LRRC28-211ENST00000558890 CD2APQ9Y5K6 639 aa9.67□□□□□ -0.86
LRRC28-211ENST00000558890 DDX58O95786 925 aaKnown RBP9.66□□□□□ -0.86
LRRC28-211ENST00000558890 KCNA3P22001 575 aa9.66□□□□□ -0.86
LRRC28-211ENST00000558890 FAM161AQ3B820 660 aa9.66□□□□□ -0.86
LRRC28-211ENST00000558890 ZKSCAN2Q63HK3 967 aa9.66□□□□□ -0.86
LRRC28-211ENST00000558890 NLGN2Q8NFZ4 835 aa9.66□□□□□ -0.86
LRRC28-211ENST00000558890 PANK1Q8TE04 598 aa9.66□□□□□ -0.86
LRRC28-211ENST00000558890 CHPF2Q9P2E5 772 aa9.66□□□□□ -0.86
LRRC28-211ENST00000558890 COG6Q9Y2V7 657 aa9.66□□□□□ -0.86
LRRC28-211ENST00000558890 NUP98P52948 1817 aa9.66□□□□□ -0.86
LRRC28-211ENST00000558890 MAP3K15Q6ZN16 1313 aa9.65□□□□□ -0.86
LRRC28-211ENST00000558890 ABCB7O75027 752 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms