RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 ARHGAP27Q6ZUM4 889 aa13.36□□□□□ -0.27
TPM1-212ENST00000558347 CCDC24Q8N4L8 307 aa13.36□□□□□ -0.27
TPM1-212ENST00000558347 TSPYL4Q9UJ04 414 aa13.36□□□□□ -0.27
TPM1-212ENST00000558347 PRR5LQ6MZQ0 368 aa13.35□□□□□ -0.27
TPM1-212ENST00000558347 COL11A2P13942 1736 aaPredicted RBP13.35□□□□□ -0.27
TPM1-212ENST00000558347 RNF123Q5XPI4 1314 aa13.35□□□□□ -0.27
TPM1-212ENST00000558347 LMOD3Q0VAK6 560 aa13.34□□□□□ -0.27
TPM1-212ENST00000558347 SETDB2Q96T68 719 aa13.34□□□□□ -0.27
TPM1-212ENST00000558347 TRIM35Q9UPQ4 493 aa13.34□□□□□ -0.27
TPM1-212ENST00000558347 HLFQ16534 295 aa13.34□□□□□ -0.27
TPM1-212ENST00000558347 CLEC4GQ6UXB4 293 aa13.34□□□□□ -0.27
TPM1-212ENST00000558347 C2CD5Q86YS7 1000 aa13.34□□□□□ -0.27
TPM1-212ENST00000558347 NGEFQ8N5V2 710 aa13.34□□□□□ -0.27
TPM1-212ENST00000558347 ANP32EQ9BTT0 268 aa13.34□□□□□ -0.27
TPM1-212ENST00000558347 CNBD1Q8NA66 436 aa13.33□□□□□ -0.28
TPM1-212ENST00000558347 ZNF526Q8TF50 670 aaPredicted RBP13.33□□□□□ -0.28
TPM1-212ENST00000558347 BRIP1Q9BX63 1249 aa13.33□□□□□ -0.28
TPM1-212ENST00000558347 H0YIN7 160 aa13.32□□□□□ -0.28
TPM1-212ENST00000558347 MYL6BP14649 208 aa13.32□□□□□ -0.28
TPM1-212ENST00000558347 NCBP3Q53F19 620 aaKnown RBP13.32□□□□□ -0.28
TPM1-212ENST00000558347 BABAM1Q9NWV8 329 aa13.32□□□□□ -0.28
TPM1-212ENST00000558347 ZNF652Q9Y2D9 606 aa13.32□□□□□ -0.28
TPM1-212ENST00000558347 NUP98P52948 1817 aa13.32□□□□□ -0.28
TPM1-212ENST00000558347 C1QTNF8P60827 252 aa13.31□□□□□ -0.28
TPM1-212ENST00000558347 TTLL7Q6ZT98 887 aa13.31□□□□□ -0.28
TPM1-212ENST00000558347 NIP7Q9Y221 180 aaKnown RBP eCLIP13.31□□□□□ -0.28
TPM1-212ENST00000558347 SBF1O95248 1867 aa13.3□□□□□ -0.28
TPM1-212ENST00000558347 CHL1O00533 1208 aa13.3□□□□□ -0.28
TPM1-212ENST00000558347 RGL2O15211 777 aa13.3□□□□□ -0.28
TPM1-212ENST00000558347 NPHP1O15259 732 aa13.3□□□□□ -0.28
TPM1-212ENST00000558347 PDE6BP35913 854 aa13.3□□□□□ -0.28
TPM1-212ENST00000558347 KRT24Q2M2I5 525 aa13.3□□□□□ -0.28
TPM1-212ENST00000558347 NBPF5PQ86XG9 351 aaPredicted RBP13.3□□□□□ -0.28
TPM1-212ENST00000558347 TTLL6Q8N841 843 aa13.3□□□□□ -0.28
TPM1-212ENST00000558347 GPBP1L1Q9HC44 474 aaPredicted RBP13.3□□□□□ -0.28
TPM1-212ENST00000558347 MAP3K15Q6ZN16 1313 aa13.3□□□□□ -0.28
TPM1-212ENST00000558347 FANCIQ9NVI1 1328 aa13.3□□□□□ -0.28
TPM1-212ENST00000558347 EIF2S2P20042 333 aaKnown RBP13.29□□□□□ -0.28
TPM1-212ENST00000558347 ST5P78524 1137 aa13.29□□□□□ -0.28
TPM1-212ENST00000558347 PDIA6Q15084 440 aa13.29□□□□□ -0.28
TPM1-212ENST00000558347 C9orf131Q5VYM1 1079 aa13.29□□□□□ -0.28
TPM1-212ENST00000558347 LRP10Q7Z4F1 713 aa13.29□□□□□ -0.28
TPM1-212ENST00000558347 ZNF622Q969S3 477 aaKnown RBP eCLIP13.29□□□□□ -0.286e-7■■□□□ 13.8
TPM1-212ENST00000558347 LAS1LQ9Y4W2 734 aaKnown RBP13.29□□□□□ -0.28
TPM1-212ENST00000558347 CACNA1SQ13698 1873 aa13.29□□□□□ -0.28
TPM1-212ENST00000558347 ERBB4Q15303 1308 aa13.29□□□□□ -0.28
TPM1-212ENST00000558347 FAM177BA6PVY3 158 aa13.29□□□□□ -0.28
TPM1-212ENST00000558347 ERVV-1B6SEH8 477 aa13.29□□□□□ -0.28
TPM1-212ENST00000558347 APAF1O14727 1248 aa13.29□□□□□ -0.28
TPM1-212ENST00000558347 ANXA1P04083 346 aa13.29□□□□□ -0.28
TPM1-212ENST00000558347 RASSF7Q02833 373 aa13.29□□□□□ -0.28
TPM1-212ENST00000558347 PROSER3Q2NL68 480 aa13.29□□□□□ -0.28
TPM1-212ENST00000558347 ZBTB3Q9H5J0 574 aa13.29□□□□□ -0.28
TPM1-212ENST00000558347 PDZRN3Q9UPQ7 1066 aa13.29□□□□□ -0.28
TPM1-212ENST00000558347 PRELPP51888 382 aa13.28□□□□□ -0.28
TPM1-212ENST00000558347 IRX6P78412 446 aaPredicted RBP13.28□□□□□ -0.28
TPM1-212ENST00000558347 KIF6Q6ZMV9 814 aa13.28□□□□□ -0.28
TPM1-212ENST00000558347 NECTIN2Q92692 538 aa13.28□□□□□ -0.28
TPM1-212ENST00000558347 ARFGEF2Q9Y6D5 1785 aa13.27□□□□□ -0.28
TPM1-212ENST00000558347 SLX4Q8IY92 1834 aa13.27□□□□□ -0.29
TPM1-212ENST00000558347 TNRC6CQ9HCJ0 1690 aaKnown RBP13.27□□□□□ -0.29
TPM1-212ENST00000558347 SRGNP10124 158 aa13.27□□□□□ -0.29
TPM1-212ENST00000558347 TPTE2Q6XPS3 522 aa13.27□□□□□ -0.29
TPM1-212ENST00000558347 RNF181Q9P0P0 153 aa13.27□□□□□ -0.29
TPM1-212ENST00000558347 ZNF219Q9P2Y4 722 aaPredicted RBP13.27□□□□□ -0.29
TPM1-212ENST00000558347 UBN2Q6ZU65 1347 aa13.27□□□□□ -0.29
TPM1-212ENST00000558347 ZNF521Q96K83 1311 aa13.27□□□□□ -0.29
TPM1-212ENST00000558347 NFKBIEO00221 500 aa13.26□□□□□ -0.29
TPM1-212ENST00000558347 MASTLQ96GX5 879 aa13.26□□□□□ -0.29
TPM1-212ENST00000558347 CFAP44Q96MT7 982 aa13.26□□□□□ -0.29
TPM1-212ENST00000558347 FER1L6Q2WGJ9 1857 aa13.25□□□□□ -0.29
TPM1-212ENST00000558347 CCDC88AQ3V6T2 1871 aa13.25□□□□□ -0.29
TPM1-212ENST00000558347 KLRG2A4D1S0 409 aaPredicted RBP13.25□□□□□ -0.29
TPM1-212ENST00000558347 KIF3CO14782 793 aa13.25□□□□□ -0.29
TPM1-212ENST00000558347 C21orf2O43822 256 aa13.25□□□□□ -0.29
TPM1-212ENST00000558347 GPTP24298 496 aa13.25□□□□□ -0.29
TPM1-212ENST00000558347 CCDC27Q2M243 656 aa13.25□□□□□ -0.29
TPM1-212ENST00000558347 STYK1Q6J9G0 422 aa13.25□□□□□ -0.29
TPM1-212ENST00000558347 GIGYF2Q6Y7W6 1299 aaKnown RBP13.25□□□□□ -0.29
TPM1-212ENST00000558347 MBIPQ9NS73 344 aa13.25□□□□□ -0.29
TPM1-212ENST00000558347 ABCC12Q96J65 1359 aa13.25□□□□□ -0.29
TPM1-212ENST00000558347 ZNF853P0CG23 659 aa13.24□□□□□ -0.29
TPM1-212ENST00000558347 PRPF40BQ6NWY9 871 aaKnown RBP13.24□□□□□ -0.29
TPM1-212ENST00000558347 NUTM1Q86Y26 1132 aa13.24□□□□□ -0.29
TPM1-212ENST00000558347 ZNF34Q8IZ26 560 aa13.24□□□□□ -0.29
TPM1-212ENST00000558347 CNKSR1Q969H4 720 aa13.24□□□□□ -0.29
TPM1-212ENST00000558347 TIAM2Q8IVF5 1701 aa13.24□□□□□ -0.29
TPM1-212ENST00000558347 SENP3-EIF4A1A0A087X0R7 540 aa13.23□□□□□ -0.29
TPM1-212ENST00000558347 SUSD4Q5VX71 490 aa13.23□□□□□ -0.29
TPM1-212ENST00000558347 HOXB7P09629 217 aa13.23□□□□□ -0.29
TPM1-212ENST00000558347 NPR1P16066 1061 aa13.23□□□□□ -0.29
TPM1-212ENST00000558347 LMNB1P20700 586 aa13.23□□□□□ -0.29
TPM1-212ENST00000558347 GTF2E1P29083 439 aaPredicted RBP13.23□□□□□ -0.29
TPM1-212ENST00000558347 AIMP1Q12904 312 aaKnown RBP13.23□□□□□ -0.29
TPM1-212ENST00000558347 ERFEQ4G0M1 354 aa13.23□□□□□ -0.29
TPM1-212ENST00000558347 HDGFL1Q5TGJ6 251 aa13.23□□□□□ -0.29
TPM1-212ENST00000558347 COPS6Q7L5N1 327 aa13.23□□□□□ -0.29
TPM1-212ENST00000558347 XAGE3Q8WTP9 111 aa13.23□□□□□ -0.29
TPM1-212ENST00000558347 NYXQ9GZU5 481 aa13.23□□□□□ -0.29
TPM1-212ENST00000558347 NMRK2Q9NPI5 230 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms