RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 TBC1D9Q6ZT07 1266 aa13.55□□□□□ -0.24
CSPG4P12-201ENST00000558282 GTF3C6Q969F1 213 aa13.55□□□□□ -0.24
CSPG4P12-201ENST00000558282 GDPD2Q9HCC8 539 aa13.55□□□□□ -0.24
CSPG4P12-201ENST00000558282 JADE2Q9NQC1 790 aa13.55□□□□□ -0.24
CSPG4P12-201ENST00000558282 SLC4A2P04920 1241 aa13.54□□□□□ -0.24
CSPG4P12-201ENST00000558282 UBE4AQ14139 1066 aa13.54□□□□□ -0.24
CSPG4P12-201ENST00000558282 CNNM3Q8NE01 707 aa13.54□□□□□ -0.24
CSPG4P12-201ENST00000558282 CCDC158Q5M9N0 1113 aa13.54□□□□□ -0.24
CSPG4P12-201ENST00000558282 CCDC129Q6ZRS4 1044 aa13.54□□□□□ -0.24
CSPG4P12-201ENST00000558282 PPFIBP2Q8ND30 876 aa13.54□□□□□ -0.24
CSPG4P12-201ENST00000558282 CTAGE1Q96RT6 745 aa13.54□□□□□ -0.24
CSPG4P12-201ENST00000558282 PYM1Q9BRP8 204 aaKnown RBP13.54□□□□□ -0.24
CSPG4P12-201ENST00000558282 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.54□□□□□ -0.24
CSPG4P12-201ENST00000558282 LUC7L2Q9Y383 392 aaKnown RBP13.54□□□□□ -0.24
CSPG4P12-201ENST00000558282 IFI16Q16666 785 aaKnown RBP13.54□□□□□ -0.24
CSPG4P12-201ENST00000558282 ANO6Q4KMQ2 910 aa13.54□□□□□ -0.24
CSPG4P12-201ENST00000558282 AFAP1L1Q8TED9 768 aa13.54□□□□□ -0.24
CSPG4P12-201ENST00000558282 THOC2Q8NI27 1593 aaKnown RBP13.54□□□□□ -0.24
CSPG4P12-201ENST00000558282 GPRASP1Q5JY77 1395 aa13.53□□□□□ -0.24
CSPG4P12-201ENST00000558282 AP1ARQ63HQ0 302 aa13.53□□□□□ -0.24
CSPG4P12-201ENST00000558282 RNF168Q8IYW5 571 aaPredicted RBP13.53□□□□□ -0.24
CSPG4P12-201ENST00000558282 FSD2A1L4K1 749 aa13.53□□□□□ -0.24
CSPG4P12-201ENST00000558282 UBASH3AP57075 661 aa13.53□□□□□ -0.24
CSPG4P12-201ENST00000558282 CTDP1Q9Y5B0 961 aaPredicted RBP13.53□□□□□ -0.24
CSPG4P12-201ENST00000558282 ZNF500O60304 480 aaPredicted RBP13.53□□□□□ -0.24
CSPG4P12-201ENST00000558282 RIOK3O14730 519 aaKnown RBP13.53□□□□□ -0.24
CSPG4P12-201ENST00000558282 C8orf76Q96K31 380 aa13.53□□□□□ -0.24
CSPG4P12-201ENST00000558282 IFT74Q96LB3 600 aa13.53□□□□□ -0.24
CSPG4P12-201ENST00000558282 STIM2Q9P246 746 aa13.53□□□□□ -0.24
CSPG4P12-201ENST00000558282 KIF4AO95239 1232 aa13.52□□□□□ -0.24
CSPG4P12-201ENST00000558282 GJB2P29033 226 aa13.52□□□□□ -0.24
CSPG4P12-201ENST00000558282 CPLX3Q8WVH0 158 aa13.52□□□□□ -0.24
CSPG4P12-201ENST00000558282 MPHOSPH10O00566 681 aaKnown RBP13.52□□□□□ -0.24
CSPG4P12-201ENST00000558282 CYLC1P35663 651 aaPredicted RBP13.52□□□□□ -0.24
CSPG4P12-201ENST00000558282 ANAPC15P60006 121 aa13.52□□□□□ -0.24
CSPG4P12-201ENST00000558282 ABCC11Q96J66 1382 aa13.52□□□□□ -0.25
CSPG4P12-201ENST00000558282 MINK1Q8N4C8 1332 aaPredicted RBP13.52□□□□□ -0.25
CSPG4P12-201ENST00000558282 PPP1R12BO60237 982 aaPredicted RBP13.52□□□□□ -0.25
CSPG4P12-201ENST00000558282 ZNF445P59923 1031 aa13.52□□□□□ -0.25
CSPG4P12-201ENST00000558282 SKAP1Q86WV1 359 aa13.52□□□□□ -0.25
CSPG4P12-201ENST00000558282 TSG101Q99816 390 aa13.52□□□□□ -0.25
CSPG4P12-201ENST00000558282 SEPT11Q9NVA2 429 aaKnown RBP13.52□□□□□ -0.25
CSPG4P12-201ENST00000558282 FEZ2Q9UHY8 353 aaPredicted RBP13.52□□□□□ -0.25
CSPG4P12-201ENST00000558282 U3KPZ7 1027 aaPredicted RBP13.52□□□□□ -0.25
CSPG4P12-201ENST00000558282 KIAA0586Q9BVV6 1533 aa13.52□□□□□ -0.25
CSPG4P12-201ENST00000558282 CPLX4Q7Z7G2 160 aa13.52□□□□□ -0.25
CSPG4P12-201ENST00000558282 KIF1BPQ96EK5 621 aa13.52□□□□□ -0.25
CSPG4P12-201ENST00000558282 GGNBP2Q9H3C7 697 aa13.52□□□□□ -0.25
CSPG4P12-201ENST00000558282 TMX1Q9H3N1 280 aa13.52□□□□□ -0.25
CSPG4P12-201ENST00000558282 EFCC1Q9HA90 598 aa13.52□□□□□ -0.25
CSPG4P12-201ENST00000558282 SYNJ2O15056 1496 aa13.51□□□□□ -0.25
CSPG4P12-201ENST00000558282 SPAG1Q07617 926 aa13.51□□□□□ -0.25
CSPG4P12-201ENST00000558282 KLHL10Q6JEL2 608 aa13.51□□□□□ -0.25
CSPG4P12-201ENST00000558282 USP48Q86UV5 1035 aa13.51□□□□□ -0.25
CSPG4P12-201ENST00000558282 PRPF40BQ6NWY9 871 aaKnown RBP13.51□□□□□ -0.25
CSPG4P12-201ENST00000558282 HFM1A2PYH4 1435 aa13.51□□□□□ -0.25
CSPG4P12-201ENST00000558282 PTGS1P23219 599 aa13.51□□□□□ -0.25
CSPG4P12-201ENST00000558282 HOOK3Q86VS8 718 aa13.51□□□□□ -0.25
CSPG4P12-201ENST00000558282 MIPOL1Q8TD10 442 aa13.51□□□□□ -0.25
CSPG4P12-201ENST00000558282 TMX3Q96JJ7 454 aa13.51□□□□□ -0.25
CSPG4P12-201ENST00000558282 RAD21O60216 631 aa13.51□□□□□ -0.25
CSPG4P12-201ENST00000558282 SYT1P21579 422 aa13.51□□□□□ -0.25
CSPG4P12-201ENST00000558282 SAMD15Q9P1V8 674 aa13.51□□□□□ -0.25
CSPG4P12-201ENST00000558282 ANKRD30BQ9BXX2 1392 aa13.51□□□□□ -0.25
CSPG4P12-201ENST00000558282 CCDC160A6NGH7 325 aa13.5□□□□□ -0.25
CSPG4P12-201ENST00000558282 POTEJP0CG39 1038 aa13.5□□□□□ -0.25
CSPG4P12-201ENST00000558282 HDAC1Q13547 482 aaPredicted RBP13.5□□□□□ -0.25
CSPG4P12-201ENST00000558282 ZSCAN26Q16670 478 aa13.5□□□□□ -0.25
CSPG4P12-201ENST00000558282 EVCP57679 992 aa13.5□□□□□ -0.25
CSPG4P12-201ENST00000558282 CCDC102BQ68D86 513 aa13.5□□□□□ -0.25
CSPG4P12-201ENST00000558282 FAM184BQ9ULE4 1060 aa13.5□□□□□ -0.25
CSPG4P12-201ENST00000558282 DESP17661 470 aa13.5□□□□□ -0.25
CSPG4P12-201ENST00000558282 TYRO3Q06418 890 aa13.5□□□□□ -0.25
CSPG4P12-201ENST00000558282 AACSQ86V21 672 aa13.5□□□□□ -0.25
CSPG4P12-201ENST00000558282 VCXQ9H320 206 aa13.5□□□□□ -0.25
CSPG4P12-201ENST00000558282 VAV2P52735 878 aa13.49□□□□□ -0.25
CSPG4P12-201ENST00000558282 SYT10Q6XYQ8 523 aa13.49□□□□□ -0.25
CSPG4P12-201ENST00000558282 MAP3K9P80192 1104 aa13.49□□□□□ -0.25
CSPG4P12-201ENST00000558282 ATP11AP98196 1134 aa13.49□□□□□ -0.25
CSPG4P12-201ENST00000558282 TDRD12Q587J7 1177 aaKnown RBP13.49□□□□□ -0.25
CSPG4P12-201ENST00000558282 EID1Q9Y6B2 187 aa13.49□□□□□ -0.25
CSPG4P12-201ENST00000558282 NDUFAB1O14561 156 aa13.49□□□□□ -0.25
CSPG4P12-201ENST00000558282 PPP2R3AQ06190 1150 aa13.49□□□□□ -0.25
CSPG4P12-201ENST00000558282 SOGA3Q5TF21 947 aa13.49□□□□□ -0.25
CSPG4P12-201ENST00000558282 DUSP27Q5VZP5 1158 aa13.49□□□□□ -0.25
CSPG4P12-201ENST00000558282 NUTM1Q86Y26 1132 aa13.49□□□□□ -0.25
CSPG4P12-201ENST00000558282 KRT83P78385 493 aa13.48□□□□□ -0.25
CSPG4P12-201ENST00000558282 RPAINQ86UA6 219 aa13.48□□□□□ -0.25
CSPG4P12-201ENST00000558282 SPATS2Q86XZ4 545 aaKnown RBP13.48□□□□□ -0.25
CSPG4P12-201ENST00000558282 CACNA2D3Q8IZS8 1091 aa13.48□□□□□ -0.25
CSPG4P12-201ENST00000558282 MRVI1Q9Y6F6 885 aa13.48□□□□□ -0.25
CSPG4P12-201ENST00000558282 IQGAP2Q13576 1575 aa13.48□□□□□ -0.25
CSPG4P12-201ENST00000558282 CCDC196A0A1B0GTZ2 297 aa13.48□□□□□ -0.25
CSPG4P12-201ENST00000558282 SRGAP3O43295 1099 aa13.48□□□□□ -0.25
CSPG4P12-201ENST00000558282 TACC1O75410 805 aa13.48□□□□□ -0.25
CSPG4P12-201ENST00000558282 NEBLO76041 1014 aa13.48□□□□□ -0.25
CSPG4P12-201ENST00000558282 TTC39AQ5SRH9 613 aa13.48□□□□□ -0.25
CSPG4P12-201ENST00000558282 ZNF526Q8TF50 670 aaPredicted RBP13.48□□□□□ -0.25
CSPG4P12-201ENST00000558282 ANKRD50Q9ULJ7 1429 aa13.48□□□□□ -0.25
CSPG4P12-201ENST00000558282 ZEB2O60315 1214 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms