RNA–Protein interactions for RNA: ENST00000558026.1

IGKV2D-28-202, Transcript of immunoglobulin kappa variable 2D-28, humanhuman

BASIC

Gene IGKV2D-28, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-28-202ENST00000558026 EPS15P42566 896 aa13.57□□□□□ -0.24
IGKV2D-28-202ENST00000558026 SOGA3Q5TF21 947 aa13.57□□□□□ -0.24
IGKV2D-28-202ENST00000558026 TBC1D9BQ66K14 1250 aa13.57□□□□□ -0.24
IGKV2D-28-202ENST00000558026 GPC2Q8N158 579 aa13.57□□□□□ -0.24
IGKV2D-28-202ENST00000558026 NFATC2IPQ8NCF5 419 aa13.57□□□□□ -0.24
IGKV2D-28-202ENST00000558026 C7orf43Q8WVR3 580 aa13.57□□□□□ -0.24
IGKV2D-28-202ENST00000558026 HPS5Q9UPZ3 1129 aa13.57□□□□□ -0.24
IGKV2D-28-202ENST00000558026 ZBTB1Q9Y2K1 713 aa13.57□□□□□ -0.24
IGKV2D-28-202ENST00000558026 GJA3Q9Y6H8 435 aa13.57□□□□□ -0.24
IGKV2D-28-202ENST00000558026 SCN11AQ9UI33 1791 aa13.56□□□□□ -0.24
IGKV2D-28-202ENST00000558026 SRGNP10124 158 aa13.56□□□□□ -0.24
IGKV2D-28-202ENST00000558026 FKBP4Q02790 459 aaKnown RBP eCLIP13.56□□□□□ -0.24
IGKV2D-28-202ENST00000558026 STYK1Q6J9G0 422 aa13.56□□□□□ -0.24
IGKV2D-28-202ENST00000558026 PDZRN3Q9UPQ7 1066 aa13.56□□□□□ -0.24
IGKV2D-28-202ENST00000558026 KIF20BQ96Q89 1820 aa13.55□□□□□ -0.24
IGKV2D-28-202ENST00000558026 CYP19A1P11511 503 aaPredicted RBP13.55□□□□□ -0.24
IGKV2D-28-202ENST00000558026 CCDC93Q567U6 631 aa13.55□□□□□ -0.24
IGKV2D-28-202ENST00000558026 COL4A5P29400 1685 aa13.54□□□□□ -0.24
IGKV2D-28-202ENST00000558026 ANKRD26Q9UPS8 1709 aa13.54□□□□□ -0.24
IGKV2D-28-202ENST00000558026 HSP90AB1P08238 724 aaKnown RBP13.54□□□□□ -0.24
IGKV2D-28-202ENST00000558026 SCNN1DP51172 638 aa13.54□□□□□ -0.24
IGKV2D-28-202ENST00000558026 CTU1Q7Z7A3 348 aaKnown RBP13.54□□□□□ -0.24
IGKV2D-28-202ENST00000558026 HHIPL1Q96JK4 782 aa13.54□□□□□ -0.24
IGKV2D-28-202ENST00000558026 ZNF408Q9H9D4 720 aa13.54□□□□□ -0.24
IGKV2D-28-202ENST00000558026 MKI67P46013 3256 aaKnown RBP13.53□□□□□ -0.24
IGKV2D-28-202ENST00000558026 TRPA1O75762 1119 aa13.53□□□□□ -0.24
IGKV2D-28-202ENST00000558026 LMOD1P29536 600 aaPredicted RBP13.53□□□□□ -0.24
IGKV2D-28-202ENST00000558026 NOGQ13253 232 aa13.53□□□□□ -0.24
IGKV2D-28-202ENST00000558026 ZNF530Q6P9A1 599 aaPredicted RBP13.53□□□□□ -0.24
IGKV2D-28-202ENST00000558026 PUS7Q96PZ0 661 aaKnown RBP13.53□□□□□ -0.24
IGKV2D-28-202ENST00000558026 GLIS2Q9BZE0 524 aaPredicted RBP13.53□□□□□ -0.24
IGKV2D-28-202ENST00000558026 BCORQ6W2J9 1755 aa13.53□□□□□ -0.24
IGKV2D-28-202ENST00000558026 IARSP41252 1262 aaKnown RBP13.52□□□□□ -0.25
IGKV2D-28-202ENST00000558026 SYNE4Q8N205 404 aa13.52□□□□□ -0.25
IGKV2D-28-202ENST00000558026 MASTLQ96GX5 879 aa13.52□□□□□ -0.25
IGKV2D-28-202ENST00000558026 AKAP11Q9UKA4 1901 aa13.51□□□□□ -0.25
IGKV2D-28-202ENST00000558026 ST20-MTHFSA0A0A6YYL1 179 aa13.51□□□□□ -0.25
IGKV2D-28-202ENST00000558026 CANXP27824 592 aaKnown RBP13.51□□□□□ -0.25
IGKV2D-28-202ENST00000558026 MTHFSP49914 203 aa13.51□□□□□ -0.25
IGKV2D-28-202ENST00000558026 SLC17A8Q8NDX2 589 aa13.51□□□□□ -0.25
IGKV2D-28-202ENST00000558026 CARD11Q9BXL7 1154 aa13.51□□□□□ -0.25
IGKV2D-28-202ENST00000558026 RNF186Q9NXI6 227 aa13.51□□□□□ -0.25
IGKV2D-28-202ENST00000558026 CUL9Q8IWT3 2517 aa13.51□□□□□ -0.25
IGKV2D-28-202ENST00000558026 WASHC2AQ641Q2 1341 aa13.5□□□□□ -0.25
IGKV2D-28-202ENST00000558026 USP50Q70EL3 339 aaPredicted RBP13.5□□□□□ -0.25
IGKV2D-28-202ENST00000558026 CNBD1Q8NA66 436 aa13.5□□□□□ -0.25
IGKV2D-28-202ENST00000558026 SAGE1Q9NXZ1 904 aa13.5□□□□□ -0.25
IGKV2D-28-202ENST00000558026 SZT2Q5T011 3432 aa13.49□□□□□ -0.25
IGKV2D-28-202ENST00000558026 NPHP1O15259 732 aa13.49□□□□□ -0.25
IGKV2D-28-202ENST00000558026 AKAP4Q5JQC9 854 aa13.49□□□□□ -0.25
IGKV2D-28-202ENST00000558026 SCN7AQ01118 1682 aa13.49□□□□□ -0.25
IGKV2D-28-202ENST00000558026 A0A0C4DFX4 3053 aa13.49□□□□□ -0.25
IGKV2D-28-202ENST00000558026 TRIOBPQ9H2D6 2365 aa13.48□□□□□ -0.25
IGKV2D-28-202ENST00000558026 FAM155AB1AL88 458 aaPredicted RBP13.48□□□□□ -0.25
IGKV2D-28-202ENST00000558026 EIF6P56537 245 aaKnown RBP13.48□□□□□ -0.25
IGKV2D-28-202ENST00000558026 HUNKP57058 714 aa13.48□□□□□ -0.25
IGKV2D-28-202ENST00000558026 KIF23Q02241 960 aaPredicted RBP13.48□□□□□ -0.25
IGKV2D-28-202ENST00000558026 SLC39A6Q13433 755 aa13.48□□□□□ -0.25
IGKV2D-28-202ENST00000558026 EIF4A2Q14240 407 aaKnown RBP13.48□□□□□ -0.25
IGKV2D-28-202ENST00000558026 PLEKHO1Q53GL0 409 aaPredicted RBP13.48□□□□□ -0.25
IGKV2D-28-202ENST00000558026 JDP2Q8WYK2 163 aa13.48□□□□□ -0.25
IGKV2D-28-202ENST00000558026 DLK2Q6UY11 383 aa13.47□□□□□ -0.25
IGKV2D-28-202ENST00000558026 RTKN2Q8IZC4 609 aa13.47□□□□□ -0.25
IGKV2D-28-202ENST00000558026 COLQQ9Y215 455 aaPredicted RBP13.47□□□□□ -0.25
IGKV2D-28-202ENST00000558026 ST5P78524 1137 aa13.46□□□□□ -0.25
IGKV2D-28-202ENST00000558026 TBC1D2BQ9UPU7 963 aa13.46□□□□□ -0.25
IGKV2D-28-202ENST00000558026 EIF5P55010 431 aaKnown RBP13.45□□□□□ -0.26
IGKV2D-28-202ENST00000558026 C1orf141Q5JVX7 400 aa13.45□□□□□ -0.26
IGKV2D-28-202ENST00000558026 TESK2Q96S53 571 aa13.45□□□□□ -0.26
IGKV2D-28-202ENST00000558026 SIN3AQ96ST3 1273 aa13.45□□□□□ -0.26
IGKV2D-28-202ENST00000558026 ZNF330Q9Y3S2 320 aaPredicted RBP13.45□□□□□ -0.26
IGKV2D-28-202ENST00000558026 NPR1P16066 1061 aa13.44□□□□□ -0.26
IGKV2D-28-202ENST00000558026 SETDB2Q96T68 719 aa13.44□□□□□ -0.26
IGKV2D-28-202ENST00000558026 ADARB2Q9NS39 739 aaKnown RBP13.44□□□□□ -0.26
IGKV2D-28-202ENST00000558026 SNED1Q8TER0 1413 aa13.44□□□□□ -0.26
IGKV2D-28-202ENST00000558026 RGMBQ6NW40 437 aa13.43□□□□□ -0.26
IGKV2D-28-202ENST00000558026 SLC51AQ86UW1 340 aa13.43□□□□□ -0.26
IGKV2D-28-202ENST00000558026 GPRC5DQ9NZD1 345 aa13.43□□□□□ -0.26
IGKV2D-28-202ENST00000558026 POLKQ9UBT6 870 aa13.43□□□□□ -0.26
IGKV2D-28-202ENST00000558026 POTEFA5A3E0 1075 aa13.42□□□□□ -0.26
IGKV2D-28-202ENST00000558026 PKN2Q16513 984 aaKnown RBP13.42□□□□□ -0.26
IGKV2D-28-202ENST00000558026 CSRNP1Q96S65 589 aa13.42□□□□□ -0.26
IGKV2D-28-202ENST00000558026 HDAC9Q9UKV0 1011 aa13.42□□□□□ -0.26
IGKV2D-28-202ENST00000558026 A0A087WZG4 1122 aa13.41□□□□□ -0.26
IGKV2D-28-202ENST00000558026 HIRAP54198 1017 aaPredicted RBP13.41□□□□□ -0.26
IGKV2D-28-202ENST00000558026 AMOTQ4VCS5 1084 aa13.41□□□□□ -0.26
IGKV2D-28-202ENST00000558026 AEBP1Q8IUX7 1158 aa13.41□□□□□ -0.26
IGKV2D-28-202ENST00000558026 PSMD1Q99460 953 aa13.41□□□□□ -0.26
IGKV2D-28-202ENST00000558026 PGAP2Q9UHJ9 254 aa13.41□□□□□ -0.26
IGKV2D-28-202ENST00000558026 ZNF157P51786 506 aaPredicted RBP13.4□□□□□ -0.26
IGKV2D-28-202ENST00000558026 NEUROD1Q13562 356 aa13.4□□□□□ -0.26
IGKV2D-28-202ENST00000558026 USP48Q86UV5 1035 aa13.4□□□□□ -0.26
IGKV2D-28-202ENST00000558026 LARGE2Q8N3Y3 721 aa13.4□□□□□ -0.26
IGKV2D-28-202ENST00000558026 ZNF296Q8WUU4 475 aaPredicted RBP13.4□□□□□ -0.26
IGKV2D-28-202ENST00000558026 CARD14Q9BXL6 1004 aa13.4□□□□□ -0.26
IGKV2D-28-202ENST00000558026 SLC52A2Q9HAB3 445 aa13.4□□□□□ -0.26
IGKV2D-28-202ENST00000558026 LGR6Q9HBX8 967 aa13.4□□□□□ -0.26
IGKV2D-28-202ENST00000558026 COL6A3P12111 3177 aa13.4□□□□□ -0.26
IGKV2D-28-202ENST00000558026 CAMTA2O94983 1202 aa13.39□□□□□ -0.27
IGKV2D-28-202ENST00000558026 CDC37L1Q7L3B6 337 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms