RNA–Protein interactions for RNA: ENST00000557860.1

ACTC1-202, Transcript of actin, alpha, cardiac muscle 1, humanhuman

TSL 3

Gene ACTC1, Length 636 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTC1-202ENST00000557860 NSD3Q9BZ95 1437 aa7.79□□□□□ -1.16
ACTC1-202ENST00000557860 TOGARAM1Q9Y4F4 1720 aa7.79□□□□□ -1.16
ACTC1-202ENST00000557860 GOLGB1Q14789 3259 aaKnown RBP7.79□□□□□ -1.16
ACTC1-202ENST00000557860 PTPREP23469 700 aa7.79□□□□□ -1.16
ACTC1-202ENST00000557860 AMHR2Q16671 573 aa7.79□□□□□ -1.16
ACTC1-202ENST00000557860 TMEM132AQ24JP5 1023 aa7.79□□□□□ -1.16
ACTC1-202ENST00000557860 PADI6Q6TGC4 694 aa7.79□□□□□ -1.16
ACTC1-202ENST00000557860 SMIM5Q71RC9 77 aa7.79□□□□□ -1.16
ACTC1-202ENST00000557860 TTC13Q8NBP0 860 aa7.79□□□□□ -1.16
ACTC1-202ENST00000557860 POLR3GLQ9BT43 218 aa7.79□□□□□ -1.16
ACTC1-202ENST00000557860 PALLDQ8WX93 1383 aa7.79□□□□□ -1.16
ACTC1-202ENST00000557860 PPP1R3GB7ZBB8 358 aa7.78□□□□□ -1.16
ACTC1-202ENST00000557860 YBX3P16989 372 aaKnown RBP eCLIP7.78□□□□□ -1.16
ACTC1-202ENST00000557860 COL9A1P20849 921 aa7.78□□□□□ -1.16
ACTC1-202ENST00000557860 PRSS12P56730 875 aa7.78□□□□□ -1.16
ACTC1-202ENST00000557860 PIGBQ92521 554 aa7.78□□□□□ -1.16
ACTC1-202ENST00000557860 GPBP1L1Q9HC44 474 aaPredicted RBP7.78□□□□□ -1.16
ACTC1-202ENST00000557860 KIF24Q5T7B8 1368 aa7.78□□□□□ -1.16
ACTC1-202ENST00000557860 PKD1L3Q7Z443 1732 aa7.78□□□□□ -1.16
ACTC1-202ENST00000557860 TNNT2P45379 298 aaPredicted RBP7.77□□□□□ -1.17
ACTC1-202ENST00000557860 C1QTNF8P60827 252 aa7.77□□□□□ -1.17
ACTC1-202ENST00000557860 AMIGO3Q86WK7 504 aa7.77□□□□□ -1.17
ACTC1-202ENST00000557860 SMARCC1Q92922 1105 aaPredicted RBP7.77□□□□□ -1.17
ACTC1-202ENST00000557860 CDCA7LQ96GN5 454 aa7.77□□□□□ -1.17
ACTC1-202ENST00000557860 EYA1Q99502 592 aa7.77□□□□□ -1.17
ACTC1-202ENST00000557860 PCGF6Q9BYE7 350 aa7.77□□□□□ -1.17
ACTC1-202ENST00000557860 KDM4CQ9H3R0 1056 aa7.77□□□□□ -1.17
ACTC1-202ENST00000557860 POLKQ9UBT6 870 aa7.77□□□□□ -1.17
ACTC1-202ENST00000557860 SPG7Q9UQ90 795 aa7.77□□□□□ -1.17
ACTC1-202ENST00000557860 C4BP0C0L5 1744 aa7.77□□□□□ -1.17
ACTC1-202ENST00000557860 UBR3Q6ZT12 1888 aa7.77□□□□□ -1.17
ACTC1-202ENST00000557860 WASHC2AQ641Q2 1341 aa7.77□□□□□ -1.17
ACTC1-202ENST00000557860 ANKRD26Q9UPS8 1709 aa7.76□□□□□ -1.17
ACTC1-202ENST00000557860 SENP3-EIF4A1A0A087X0R7 540 aa7.76□□□□□ -1.17
ACTC1-202ENST00000557860 FLAD1Q8NFF5 587 aa7.76□□□□□ -1.17
ACTC1-202ENST00000557860 ASAP1Q9ULH1 1129 aa7.76□□□□□ -1.17
ACTC1-202ENST00000557860 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.75□□□□□ -1.17
ACTC1-202ENST00000557860 LOC102724428A0A0B4J2F2 783 aa7.75□□□□□ -1.17
ACTC1-202ENST00000557860 GRIN3BO60391 1043 aa7.75□□□□□ -1.17
ACTC1-202ENST00000557860 HMGB2P26583 209 aaKnown RBP7.75□□□□□ -1.17
ACTC1-202ENST00000557860 SIK1P57059 783 aa7.75□□□□□ -1.17
ACTC1-202ENST00000557860 LINC00116Q8NCU8 138 aa7.75□□□□□ -1.17
ACTC1-202ENST00000557860 WWC3Q9ULE0 1092 aa7.75□□□□□ -1.17
ACTC1-202ENST00000557860 TIMELESSQ9UNS1 1208 aa7.75□□□□□ -1.17
ACTC1-202ENST00000557860 CD2APQ9Y5K6 639 aa7.75□□□□□ -1.17
ACTC1-202ENST00000557860 ADGRG1Q9Y653 693 aa7.75□□□□□ -1.17
ACTC1-202ENST00000557860 NCAPD2Q15021 1401 aa7.75□□□□□ -1.17
ACTC1-202ENST00000557860 GIGYF1O75420 1035 aaPredicted RBP7.74□□□□□ -1.17
ACTC1-202ENST00000557860 OATP04181 439 aa7.74□□□□□ -1.17
ACTC1-202ENST00000557860 PHKG2P15735 406 aa7.74□□□□□ -1.17
ACTC1-202ENST00000557860 ATP6V1AP38606 617 aa7.74□□□□□ -1.17
ACTC1-202ENST00000557860 EMP3P54852 163 aa7.74□□□□□ -1.17
ACTC1-202ENST00000557860 EIF4A2Q14240 407 aaKnown RBP7.74□□□□□ -1.17
ACTC1-202ENST00000557860 FAM161AQ3B820 660 aa7.74□□□□□ -1.17
ACTC1-202ENST00000557860 VARS2Q5ST30 1063 aaKnown RBP7.74□□□□□ -1.17
ACTC1-202ENST00000557860 PARP9Q8IXQ6 854 aa7.74□□□□□ -1.17
ACTC1-202ENST00000557860 IFNL2Q8IZJ0 200 aa7.74□□□□□ -1.17
ACTC1-202ENST00000557860 PHOX2BQ99453 314 aa7.74□□□□□ -1.17
ACTC1-202ENST00000557860 TMOD3Q9NYL9 352 aa7.74□□□□□ -1.17
ACTC1-202ENST00000557860 FAM198AQ9UFP1 575 aa7.74□□□□□ -1.17
ACTC1-202ENST00000557860 ITPK1Q13572 414 aa7.73□□□□□ -1.17
ACTC1-202ENST00000557860 METTL3Q86U44 580 aaKnown RBP7.73□□□□□ -1.17
ACTC1-202ENST00000557860 MARVELD3Q96A59 401 aa7.73□□□□□ -1.17
ACTC1-202ENST00000557860 KCNK17Q96T54 332 aa7.73□□□□□ -1.17
ACTC1-202ENST00000557860 PCDH10Q9P2E7 1040 aa7.73□□□□□ -1.17
ACTC1-202ENST00000557860 TSKSQ9UJT2 592 aa7.73□□□□□ -1.17
ACTC1-202ENST00000557860 HSPA5P11021 654 aaKnown RBP7.72□□□□□ -1.17
ACTC1-202ENST00000557860 SSFA2P28290 1259 aa7.72□□□□□ -1.17
ACTC1-202ENST00000557860 POTEEQ6S8J3 1075 aa7.72□□□□□ -1.17
ACTC1-202ENST00000557860 PXYLP1Q8TE99 480 aa7.72□□□□□ -1.17
ACTC1-202ENST00000557860 PANK3Q9H999 370 aa7.72□□□□□ -1.17
ACTC1-202ENST00000557860 ATG3Q9NT62 314 aa7.72□□□□□ -1.17
ACTC1-202ENST00000557860 TRIM6-TRIM34B2RNG4 842 aa7.71□□□□□ -1.18
ACTC1-202ENST00000557860 EIF4G2P78344 907 aaKnown RBP eCLIP7.71□□□□□ -1.18
ACTC1-202ENST00000557860 TTLL12Q14166 644 aaPredicted RBP7.71□□□□□ -1.18
ACTC1-202ENST00000557860 ZNF526Q8TF50 670 aaPredicted RBP7.71□□□□□ -1.18
ACTC1-202ENST00000557860 SLC4A9Q96Q91 983 aa7.71□□□□□ -1.18
ACTC1-202ENST00000557860 TMUB1Q9BVT8 246 aa7.71□□□□□ -1.18
ACTC1-202ENST00000557860 REPIN1Q9BWE0 567 aaKnown RBP7.71□□□□□ -1.18
ACTC1-202ENST00000557860 IGSF1Q8N6C5 1336 aa7.71□□□□□ -1.18
ACTC1-202ENST00000557860 CLSPNQ9HAW4 1339 aa7.71□□□□□ -1.18
ACTC1-202ENST00000557860 ATP10DQ9P241 1426 aa7.7□□□□□ -1.18
ACTC1-202ENST00000557860 N4BP2Q86UW6 1770 aaPredicted RBP7.7□□□□□ -1.18
ACTC1-202ENST00000557860 FAM205CA6NFA0 338 aa7.7□□□□□ -1.18
ACTC1-202ENST00000557860 ERVV-2B6SEH9 535 aa7.7□□□□□ -1.18
ACTC1-202ENST00000557860 ARHGAP33O14559 1287 aa7.7□□□□□ -1.18
ACTC1-202ENST00000557860 PSEN2P49810 448 aa7.7□□□□□ -1.18
ACTC1-202ENST00000557860 PLEKHO1Q53GL0 409 aaPredicted RBP7.7□□□□□ -1.18
ACTC1-202ENST00000557860 TRAPPC3LQ5T215 181 aa7.7□□□□□ -1.18
ACTC1-202ENST00000557860 GIGYF2Q6Y7W6 1299 aaKnown RBP7.7□□□□□ -1.18
ACTC1-202ENST00000557860 ZNF687Q8N1G0 1237 aa7.7□□□□□ -1.18
ACTC1-202ENST00000557860 RBM46Q8TBY0 533 aaKnown RBP7.7□□□□□ -1.18
ACTC1-202ENST00000557860 DCAF5Q96JK2 942 aa7.7□□□□□ -1.18
ACTC1-202ENST00000557860 DAXXQ9UER7 740 aaPredicted RBP7.7□□□□□ -1.18
ACTC1-202ENST00000557860 MYH14Q7Z406 1995 aaKnown RBP7.7□□□□□ -1.18
ACTC1-202ENST00000557860 HSP90AB1P08238 724 aaKnown RBP7.69□□□□□ -1.18
ACTC1-202ENST00000557860 MMP10P09238 476 aa7.69□□□□□ -1.18
ACTC1-202ENST00000557860 CLCN1P35523 988 aa7.69□□□□□ -1.18
ACTC1-202ENST00000557860 CABP4P57796 275 aa7.69□□□□□ -1.18
ACTC1-202ENST00000557860 MDM2Q00987 491 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms