RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 COL15A1P39059 1388 aa13.28□□□□□ -0.28
NEDD1-211ENST00000557454 PDE6BP35913 854 aa13.27□□□□□ -0.29
NEDD1-211ENST00000557454 ZIC5Q96T25 663 aa13.27□□□□□ -0.29
NEDD1-211ENST00000557454 BRIP1Q9BX63 1249 aa13.27□□□□□ -0.29
NEDD1-211ENST00000557454 PDZRN3Q9UPQ7 1066 aa13.27□□□□□ -0.29
NEDD1-211ENST00000557454 ANKRD31Q8N7Z5 1873 aa13.27□□□□□ -0.29
NEDD1-211ENST00000557454 SZT2Q5T011 3432 aa13.26□□□□□ -0.29
NEDD1-211ENST00000557454 DNAJC10Q8IXB1 793 aa13.26□□□□□ -0.29
NEDD1-211ENST00000557454 CNKSR1Q969H4 720 aa13.26□□□□□ -0.29
NEDD1-211ENST00000557454 SLX4Q8IY92 1834 aa13.25□□□□□ -0.29
NEDD1-211ENST00000557454 PRR5LQ6MZQ0 368 aa13.25□□□□□ -0.29
NEDD1-211ENST00000557454 GPC2Q8N158 579 aa13.25□□□□□ -0.29
NEDD1-211ENST00000557454 CUL9Q8IWT3 2517 aa13.25□□□□□ -0.29
NEDD1-211ENST00000557454 A0A0C4DFX4 3053 aa13.25□□□□□ -0.29
NEDD1-211ENST00000557454 PPM1GO15355 546 aaPredicted RBP13.24□□□□□ -0.29
NEDD1-211ENST00000557454 CELF2O95319 508 aaKnown RBP13.24□□□□□ -0.29
NEDD1-211ENST00000557454 HSP90AB1P08238 724 aaKnown RBP13.24□□□□□ -0.29
NEDD1-211ENST00000557454 FKBP4Q02790 459 aaKnown RBP eCLIP13.24□□□□□ -0.29
NEDD1-211ENST00000557454 CCDC93Q567U6 631 aa13.24□□□□□ -0.29
NEDD1-211ENST00000557454 PUS7Q96PZ0 661 aaKnown RBP13.24□□□□□ -0.29
NEDD1-211ENST00000557454 ZBTB1Q9Y2K1 713 aa13.24□□□□□ -0.29
NEDD1-211ENST00000557454 FZD9O00144 591 aa13.23□□□□□ -0.29
NEDD1-211ENST00000557454 STYK1Q6J9G0 422 aa13.23□□□□□ -0.29
NEDD1-211ENST00000557454 HHIPL1Q96JK4 782 aa13.23□□□□□ -0.29
NEDD1-211ENST00000557454 HPS5Q9UPZ3 1129 aa13.23□□□□□ -0.29
NEDD1-211ENST00000557454 TRPM7Q96QT4 1865 aa13.23□□□□□ -0.29
NEDD1-211ENST00000557454 SRGNP10124 158 aa13.22□□□□□ -0.29
NEDD1-211ENST00000557454 LMOD1P29536 600 aaPredicted RBP13.22□□□□□ -0.29
NEDD1-211ENST00000557454 EPS15P42566 896 aa13.22□□□□□ -0.29
NEDD1-211ENST00000557454 NOGQ13253 232 aa13.22□□□□□ -0.29
NEDD1-211ENST00000557454 TBC1D9BQ66K14 1250 aa13.22□□□□□ -0.29
NEDD1-211ENST00000557454 OLFM4Q6UX06 510 aa13.22□□□□□ -0.29
NEDD1-211ENST00000557454 CTU1Q7Z7A3 348 aaKnown RBP13.22□□□□□ -0.29
NEDD1-211ENST00000557454 NFATC2IPQ8NCF5 419 aa13.22□□□□□ -0.29
NEDD1-211ENST00000557454 C7orf43Q8WVR3 580 aa13.22□□□□□ -0.29
NEDD1-211ENST00000557454 GJA3Q9Y6H8 435 aa13.22□□□□□ -0.29
NEDD1-211ENST00000557454 CYP19A1P11511 503 aaPredicted RBP13.21□□□□□ -0.29
NEDD1-211ENST00000557454 SCNN1DP51172 638 aa13.21□□□□□ -0.29
NEDD1-211ENST00000557454 ZNF530Q6P9A1 599 aaPredicted RBP13.21□□□□□ -0.29
NEDD1-211ENST00000557454 MASTLQ96GX5 879 aa13.21□□□□□ -0.29
NEDD1-211ENST00000557454 IARSP41252 1262 aaKnown RBP13.2□□□□□ -0.3
NEDD1-211ENST00000557454 CARD11Q9BXL7 1154 aa13.2□□□□□ -0.3
NEDD1-211ENST00000557454 ZNF408Q9H9D4 720 aa13.2□□□□□ -0.3
NEDD1-211ENST00000557454 SAGE1Q9NXZ1 904 aa13.2□□□□□ -0.3
NEDD1-211ENST00000557454 CACNA1SQ13698 1873 aa13.2□□□□□ -0.3
NEDD1-211ENST00000557454 USP50Q70EL3 339 aaPredicted RBP13.19□□□□□ -0.3
NEDD1-211ENST00000557454 WASHC2AQ641Q2 1341 aa13.18□□□□□ -0.3
NEDD1-211ENST00000557454 ARFGEF2Q9Y6D5 1785 aa13.18□□□□□ -0.3
NEDD1-211ENST00000557454 ST20-MTHFSA0A0A6YYL1 179 aa13.18□□□□□ -0.3
NEDD1-211ENST00000557454 TRPA1O75762 1119 aa13.18□□□□□ -0.3
NEDD1-211ENST00000557454 MTHFSP49914 203 aa13.18□□□□□ -0.3
NEDD1-211ENST00000557454 CNBD1Q8NA66 436 aa13.18□□□□□ -0.3
NEDD1-211ENST00000557454 GLIS2Q9BZE0 524 aaPredicted RBP13.18□□□□□ -0.3
NEDD1-211ENST00000557454 ANKRD26Q9UPS8 1709 aa13.18□□□□□ -0.3
NEDD1-211ENST00000557454 NPHP1O15259 732 aa13.17□□□□□ -0.3
NEDD1-211ENST00000557454 EIF6P56537 245 aaKnown RBP13.17□□□□□ -0.3
NEDD1-211ENST00000557454 AKAP4Q5JQC9 854 aa13.17□□□□□ -0.3
NEDD1-211ENST00000557454 COL4A5P29400 1685 aa13.16□□□□□ -0.3
NEDD1-211ENST00000557454 CANXP27824 592 aaKnown RBP13.16□□□□□ -0.3
NEDD1-211ENST00000557454 ST5P78524 1137 aa13.16□□□□□ -0.3
NEDD1-211ENST00000557454 PLEKHO1Q53GL0 409 aaPredicted RBP13.16□□□□□ -0.3
NEDD1-211ENST00000557454 SYNE4Q8N205 404 aa13.16□□□□□ -0.3
NEDD1-211ENST00000557454 JDP2Q8WYK2 163 aa13.16□□□□□ -0.3
NEDD1-211ENST00000557454 RNF186Q9NXI6 227 aa13.16□□□□□ -0.3
NEDD1-211ENST00000557454 BCORQ6W2J9 1755 aa13.16□□□□□ -0.3
NEDD1-211ENST00000557454 HUNKP57058 714 aa13.15□□□□□ -0.3
NEDD1-211ENST00000557454 EIF4A2Q14240 407 aaKnown RBP13.15□□□□□ -0.3
NEDD1-211ENST00000557454 RTKN2Q8IZC4 609 aa13.15□□□□□ -0.3
NEDD1-211ENST00000557454 SLC17A8Q8NDX2 589 aa13.15□□□□□ -0.3
NEDD1-211ENST00000557454 KIF20BQ96Q89 1820 aa13.15□□□□□ -0.3
NEDD1-211ENST00000557454 TRIOBPQ9H2D6 2365 aa13.14□□□□□ -0.31
NEDD1-211ENST00000557454 C1orf141Q5JVX7 400 aa13.14□□□□□ -0.31
NEDD1-211ENST00000557454 SCN7AQ01118 1682 aa13.13□□□□□ -0.31
NEDD1-211ENST00000557454 FAM155AB1AL88 458 aaPredicted RBP13.13□□□□□ -0.31
NEDD1-211ENST00000557454 EIF5P55010 431 aaKnown RBP13.13□□□□□ -0.31
NEDD1-211ENST00000557454 KIF23Q02241 960 aaPredicted RBP13.13□□□□□ -0.31
NEDD1-211ENST00000557454 SLC39A6Q13433 755 aa13.13□□□□□ -0.31
NEDD1-211ENST00000557454 TESK2Q96S53 571 aa13.13□□□□□ -0.31
NEDD1-211ENST00000557454 U3KPZ7 1027 aaPredicted RBP13.13□□□□□ -0.31
NEDD1-211ENST00000557454 SCN11AQ9UI33 1791 aa13.12□□□□□ -0.31
NEDD1-211ENST00000557454 A0A087WZG4 1122 aa13.12□□□□□ -0.31
NEDD1-211ENST00000557454 NPR1P16066 1061 aa13.12□□□□□ -0.31
NEDD1-211ENST00000557454 ADARB2Q9NS39 739 aaKnown RBP13.12□□□□□ -0.31
NEDD1-211ENST00000557454 COL6A3P12111 3177 aa13.11□□□□□ -0.31
NEDD1-211ENST00000557454 BRCA2P51587 3418 aa13.11□□□□□ -0.31
NEDD1-211ENST00000557454 PKN2Q16513 984 aaKnown RBP13.11□□□□□ -0.31
NEDD1-211ENST00000557454 AMOTQ4VCS5 1084 aa13.11□□□□□ -0.31
NEDD1-211ENST00000557454 SETDB2Q96T68 719 aa13.11□□□□□ -0.31
NEDD1-211ENST00000557454 TBC1D2BQ9UPU7 963 aa13.11□□□□□ -0.31
NEDD1-211ENST00000557454 COLQQ9Y215 455 aaPredicted RBP13.11□□□□□ -0.31
NEDD1-211ENST00000557454 SNED1Q8TER0 1413 aa13.11□□□□□ -0.31
NEDD1-211ENST00000557454 RGMBQ6NW40 437 aa13.1□□□□□ -0.31
NEDD1-211ENST00000557454 PSMD1Q99460 953 aa13.1□□□□□ -0.31
NEDD1-211ENST00000557454 ZNF330Q9Y3S2 320 aaPredicted RBP13.1□□□□□ -0.31
NEDD1-211ENST00000557454 HTTP42858 3142 aa13.1□□□□□ -0.31
NEDD1-211ENST00000557454 SIN3AQ96ST3 1273 aa13.09□□□□□ -0.31
NEDD1-211ENST00000557454 SLC52A2Q9HAB3 445 aa13.09□□□□□ -0.31
NEDD1-211ENST00000557454 GPRC5DQ9NZD1 345 aa13.09□□□□□ -0.31
NEDD1-211ENST00000557454 POLKQ9UBT6 870 aa13.09□□□□□ -0.31
NEDD1-211ENST00000557454 HDAC9Q9UKV0 1011 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms