RNA–Protein interactions for RNA: ENST00000556507.1

TGFB3-205, Transcript of transforming growth factor beta 3, humanhuman

TSL 3

Gene TGFB3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-205ENST00000556507 SERTM1A2A2V5 107 aa5.89□□□□□ -1.47
TGFB3-205ENST00000556507 M0R2N6 131 aa5.89□□□□□ -1.47
TGFB3-205ENST00000556507 ATXN7O15265 892 aaPredicted RBP5.89□□□□□ -1.47
TGFB3-205ENST00000556507 BMP4P12644 408 aa5.89□□□□□ -1.47
TGFB3-205ENST00000556507 TXLNAP40222 546 aa5.89□□□□□ -1.47
TGFB3-205ENST00000556507 CTBSQ01459 385 aa5.89□□□□□ -1.47
TGFB3-205ENST00000556507 LARP1Q6PKG0 1096 aaKnown RBP5.89□□□□□ -1.47
TGFB3-205ENST00000556507 HOMEZQ8IX15 550 aa5.89□□□□□ -1.47
TGFB3-205ENST00000556507 SIX5Q8N196 739 aa5.89□□□□□ -1.47
TGFB3-205ENST00000556507 NEDD1Q8NHV4 660 aa5.89□□□□□ -1.47
TGFB3-205ENST00000556507 SCARF2Q96GP6 870 aaPredicted RBP5.89□□□□□ -1.47
TGFB3-205ENST00000556507 ZNF777Q9ULD5 760 aaPredicted RBP5.89□□□□□ -1.47
TGFB3-205ENST00000556507 SFI1A8K8P3 1242 aa5.88□□□□□ -1.47
TGFB3-205ENST00000556507 LMOD1P29536 600 aaPredicted RBP5.88□□□□□ -1.47
TGFB3-205ENST00000556507 RANGAP1P46060 587 aaPredicted RBP5.88□□□□□ -1.47
TGFB3-205ENST00000556507 PSMA6P60900 246 aaKnown RBP5.88□□□□□ -1.47
TGFB3-205ENST00000556507 TSEN2Q8NCE0 465 aaKnown RBP5.88□□□□□ -1.47
TGFB3-205ENST00000556507 TSPAN10Q9H1Z9 355 aaPredicted RBP5.88□□□□□ -1.47
TGFB3-205ENST00000556507 LRRC4BQ9NT99 713 aa5.88□□□□□ -1.47
TGFB3-205ENST00000556507 CHMP3Q9Y3E7 222 aa5.88□□□□□ -1.47
TGFB3-205ENST00000556507 ARAP1Q96P48 1450 aa5.88□□□□□ -1.47
TGFB3-205ENST00000556507 CC2D2AQ9P2K1 1620 aa5.88□□□□□ -1.47
TGFB3-205ENST00000556507 DCDC2BA2VCK2 349 aa5.87□□□□□ -1.47
TGFB3-205ENST00000556507 C2CD2LO14523 706 aa5.87□□□□□ -1.47
TGFB3-205ENST00000556507 KHNYNO15037 678 aaKnown RBP5.87□□□□□ -1.47
TGFB3-205ENST00000556507 OIP5O43482 229 aa5.87□□□□□ -1.47
TGFB3-205ENST00000556507 DKK1O94907 266 aa5.87□□□□□ -1.47
TGFB3-205ENST00000556507 MAPTP10636 758 aaKnown RBP5.87□□□□□ -1.47
TGFB3-205ENST00000556507 SEC13P55735 322 aa5.87□□□□□ -1.47
TGFB3-205ENST00000556507 KANK4Q5T7N3 995 aaPredicted RBP5.87□□□□□ -1.47
TGFB3-205ENST00000556507 VRTNQ9H8Y1 702 aa5.87□□□□□ -1.47
TGFB3-205ENST00000556507 NEUROD4Q9HD90 331 aa5.87□□□□□ -1.47
TGFB3-205ENST00000556507 GDF2Q9UK05 429 aaPredicted RBP5.87□□□□□ -1.47
TGFB3-205ENST00000556507 CLSPNQ9HAW4 1339 aa5.87□□□□□ -1.47
TGFB3-205ENST00000556507 CARMIL1Q5VZK9 1371 aa5.87□□□□□ -1.47
TGFB3-205ENST00000556507 CUX2O14529 1486 aa5.87□□□□□ -1.47
TGFB3-205ENST00000556507 EML1O00423 815 aa5.86□□□□□ -1.47
TGFB3-205ENST00000556507 IRS1P35568 1242 aa5.86□□□□□ -1.47
TGFB3-205ENST00000556507 GSK3AP49840 483 aa5.86□□□□□ -1.47
TGFB3-205ENST00000556507 RASSF7Q02833 373 aa5.86□□□□□ -1.47
TGFB3-205ENST00000556507 TNP2Q05952 138 aa5.86□□□□□ -1.47
TGFB3-205ENST00000556507 SH3PXD2AQ5TCZ1 1133 aa5.86□□□□□ -1.47
TGFB3-205ENST00000556507 DIEXFQ68CQ4 756 aaKnown RBP5.86□□□□□ -1.47
TGFB3-205ENST00000556507 TMEM151AQ8N4L1 468 aa5.86□□□□□ -1.47
TGFB3-205ENST00000556507 GOLGA6L1Q8N7Z2 621 aa5.86□□□□□ -1.47
TGFB3-205ENST00000556507 GALNT6Q8NCL4 622 aa5.86□□□□□ -1.47
TGFB3-205ENST00000556507 FANCD2Q9BXW9 1451 aa5.85□□□□□ -1.47
TGFB3-205ENST00000556507 PPP1R12BO60237 982 aaPredicted RBP5.85□□□□□ -1.47
TGFB3-205ENST00000556507 GDF11O95390 407 aa5.85□□□□□ -1.47
TGFB3-205ENST00000556507 FAM157BP0CG42 384 aa5.85□□□□□ -1.47
TGFB3-205ENST00000556507 CD33P20138 364 aa5.85□□□□□ -1.47
TGFB3-205ENST00000556507 DPYDQ12882 1025 aa5.85□□□□□ -1.47
TGFB3-205ENST00000556507 PTK7Q13308 1070 aa5.85□□□□□ -1.47
TGFB3-205ENST00000556507 CRTC2Q53ET0 693 aaPredicted RBP5.85□□□□□ -1.47
TGFB3-205ENST00000556507 LRRC69Q6ZNQ3 347 aa5.85□□□□□ -1.47
TGFB3-205ENST00000556507 PODNQ7Z5L7 613 aa5.85□□□□□ -1.47
TGFB3-205ENST00000556507 BEND7Q8N7W2 519 aaPredicted RBP5.85□□□□□ -1.47
TGFB3-205ENST00000556507 RHPN1Q8TCX5 695 aa5.85□□□□□ -1.47
TGFB3-205ENST00000556507 HINFPQ9BQA5 517 aa5.85□□□□□ -1.47
TGFB3-205ENST00000556507 GGA1Q9UJY5 639 aa5.85□□□□□ -1.47
TGFB3-205ENST00000556507 HCN4Q9Y3Q4 1203 aa5.85□□□□□ -1.47
TGFB3-205ENST00000556507 DNMT3AQ9Y6K1 912 aaPredicted RBP5.85□□□□□ -1.47
TGFB3-205ENST00000556507 MAP3K1Q13233 1512 aa5.84□□□□□ -1.47
TGFB3-205ENST00000556507 FGD5Q6ZNL6 1462 aa5.84□□□□□ -1.47
TGFB3-205ENST00000556507 ARHGAP35Q9NRY4 1499 aa5.84□□□□□ -1.47
TGFB3-205ENST00000556507 ATAD2Q6PL18 1390 aa5.84□□□□□ -1.47
TGFB3-205ENST00000556507 CNTNAP5Q8WYK1 1306 aa5.84□□□□□ -1.47
TGFB3-205ENST00000556507 FAM196BA6NMK8 535 aa5.84□□□□□ -1.47
TGFB3-205ENST00000556507 PHF20L1A8MW92 1017 aa5.84□□□□□ -1.47
TGFB3-205ENST00000556507 FAM182BQ5T319 152 aa5.84□□□□□ -1.47
TGFB3-205ENST00000556507 SAMD5Q5TGI4 173 aa5.84□□□□□ -1.47
TGFB3-205ENST00000556507 C1orf53Q5VUE5 145 aa5.84□□□□□ -1.47
TGFB3-205ENST00000556507 KANK3Q6NY19 840 aa5.84□□□□□ -1.47
TGFB3-205ENST00000556507 C1orf229Q6ZS94 237 aaPredicted RBP5.84□□□□□ -1.47
TGFB3-205ENST00000556507 ERICH6Q7L0X2 663 aa5.84□□□□□ -1.47
TGFB3-205ENST00000556507 EDARADDQ8WWZ3 215 aa5.84□□□□□ -1.47
TGFB3-205ENST00000556507 SCG3Q8WXD2 468 aaKnown RBP5.84□□□□□ -1.47
TGFB3-205ENST00000556507 GPC6Q9Y625 555 aaPredicted RBP5.84□□□□□ -1.47
TGFB3-205ENST00000556507 RRBP1Q9P2E9 1410 aaKnown RBP5.83□□□□□ -1.48
TGFB3-205ENST00000556507 USP17L15C9J2P7 530 aa5.83□□□□□ -1.48
TGFB3-205ENST00000556507 USP17L10C9JJH3 530 aa5.83□□□□□ -1.48
TGFB3-205ENST00000556507 USP17L13C9JLJ4 530 aa5.83□□□□□ -1.48
TGFB3-205ENST00000556507 USP17L12C9JPN9 530 aa5.83□□□□□ -1.48
TGFB3-205ENST00000556507 USP17L11C9JVI0 530 aa5.83□□□□□ -1.48
TGFB3-205ENST00000556507 USP17L21D6R901 530 aa5.83□□□□□ -1.48
TGFB3-205ENST00000556507 USP17L18D6R9N7 530 aa5.83□□□□□ -1.48
TGFB3-205ENST00000556507 USP17L22D6RA61 530 aa5.83□□□□□ -1.48
TGFB3-205ENST00000556507 USP17L17D6RBQ6 530 aa5.83□□□□□ -1.48
TGFB3-205ENST00000556507 USP17L19D6RCP7 530 aa5.83□□□□□ -1.48
TGFB3-205ENST00000556507 USP17L20D6RJB6 530 aa5.83□□□□□ -1.48
TGFB3-205ENST00000556507 C21orf2O43822 256 aa5.83□□□□□ -1.48
TGFB3-205ENST00000556507 ARAFP10398 606 aa5.83□□□□□ -1.48
TGFB3-205ENST00000556507 HIRAP54198 1017 aaPredicted RBP5.83□□□□□ -1.48
TGFB3-205ENST00000556507 USP17L24Q0WX57 530 aa5.83□□□□□ -1.48
TGFB3-205ENST00000556507 CFAP70Q5T0N1 1121 aa5.83□□□□□ -1.48
TGFB3-205ENST00000556507 ANKMY2Q8IV38 441 aa5.83□□□□□ -1.48
TGFB3-205ENST00000556507 GAS2L2Q8NHY3 880 aa5.83□□□□□ -1.48
TGFB3-205ENST00000556507 CHMP7Q8WUX9 453 aaPredicted RBP5.83□□□□□ -1.48
TGFB3-205ENST00000556507 C7orf43Q8WVR3 580 aa5.83□□□□□ -1.48
TGFB3-205ENST00000556507 PHACTR1Q9C0D0 580 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms