RNA–Protein interactions for RNA: ENST00000556501.1

GPHN-213, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-213ENST00000556501 BAG4O95429 457 aaKnown RBP6.58□□□□□ -1.36
GPHN-213ENST00000556501 NBPF7P0C2Y1 421 aaPredicted RBP6.58□□□□□ -1.36
GPHN-213ENST00000556501 MCM2P49736 904 aa6.58□□□□□ -1.36
GPHN-213ENST00000556501 MRE11P49959 708 aa6.58□□□□□ -1.36
GPHN-213ENST00000556501 KSR2Q6VAB6 950 aa6.58□□□□□ -1.36
GPHN-213ENST00000556501 FAM43AQ8N2R8 423 aa6.58□□□□□ -1.36
GPHN-213ENST00000556501 PI4KAP1Q8N8J0 262 aa6.58□□□□□ -1.36
GPHN-213ENST00000556501 PI4K2BQ8TCG2 481 aa6.58□□□□□ -1.36
GPHN-213ENST00000556501 SP7Q8TDD2 431 aaPredicted RBP6.58□□□□□ -1.36
GPHN-213ENST00000556501 KIF1BPQ96EK5 621 aa6.58□□□□□ -1.36
GPHN-213ENST00000556501 C19orf44Q9H6X5 657 aa6.58□□□□□ -1.36
GPHN-213ENST00000556501 HYPKQ9NX55 129 aa6.58□□□□□ -1.36
GPHN-213ENST00000556501 HDAC5Q9UQL6 1122 aa6.58□□□□□ -1.36
GPHN-213ENST00000556501 UBR2Q8IWV8 1755 aa6.58□□□□□ -1.36
GPHN-213ENST00000556501 UTYO14607 1347 aa6.57□□□□□ -1.36
GPHN-213ENST00000556501 TTC41PQ6P2S7 1318 aa6.57□□□□□ -1.36
GPHN-213ENST00000556501 RAD50Q92878 1312 aa6.57□□□□□ -1.36
GPHN-213ENST00000556501 NUP188Q5SRE5 1749 aa6.57□□□□□ -1.36
GPHN-213ENST00000556501 TRIM6-TRIM34B2RNG4 842 aa6.57□□□□□ -1.36
GPHN-213ENST00000556501 SRGAP3O43295 1099 aa6.57□□□□□ -1.36
GPHN-213ENST00000556501 SURF6O75683 361 aaKnown RBP6.57□□□□□ -1.36
GPHN-213ENST00000556501 ANXA1P04083 346 aa6.57□□□□□ -1.36
GPHN-213ENST00000556501 XRCC6P12956 609 aaKnown RBP eCLIP6.57□□□□□ -1.36
GPHN-213ENST00000556501 CUL4AQ13619 759 aa6.57□□□□□ -1.36
GPHN-213ENST00000556501 PROSER3Q2NL68 480 aa6.57□□□□□ -1.36
GPHN-213ENST00000556501 KLHL40Q2TBA0 621 aa6.57□□□□□ -1.36
GPHN-213ENST00000556501 UNC5CLQ8IV45 518 aa6.57□□□□□ -1.36
GPHN-213ENST00000556501 GZF1Q9H116 711 aaPredicted RBP6.57□□□□□ -1.36
GPHN-213ENST00000556501 IL1RAPL2Q9NP60 686 aa6.57□□□□□ -1.36
GPHN-213ENST00000556501 DDX21Q9NR30 783 aaKnown RBP eCLIP6.57□□□□□ -1.36
GPHN-213ENST00000556501 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.57□□□□□ -1.36
GPHN-213ENST00000556501 AXIN2Q9Y2T1 843 aa6.57□□□□□ -1.36
GPHN-213ENST00000556501 CPDO75976 1380 aa6.57□□□□□ -1.36
GPHN-213ENST00000556501 TMEM94Q12767 1356 aa6.57□□□□□ -1.36
GPHN-213ENST00000556501 TJP1Q07157 1748 aa6.56□□□□□ -1.36
GPHN-213ENST00000556501 SHANK3Q9BYB0 1731 aa6.56□□□□□ -1.36
GPHN-213ENST00000556501 NPHP3Q7Z494 1330 aa6.56□□□□□ -1.36
GPHN-213ENST00000556501 SGSM2O43147 1006 aa6.56□□□□□ -1.36
GPHN-213ENST00000556501 DDX58O95786 925 aaKnown RBP6.56□□□□□ -1.36
GPHN-213ENST00000556501 LMOD2Q6P5Q4 547 aa6.56□□□□□ -1.36
GPHN-213ENST00000556501 NUTM1Q86Y26 1132 aa6.56□□□□□ -1.36
GPHN-213ENST00000556501 ERC1Q8IUD2 1116 aa6.56□□□□□ -1.36
GPHN-213ENST00000556501 LINS1Q8NG48 757 aa6.56□□□□□ -1.36
GPHN-213ENST00000556501 RILPL2Q969X0 211 aa6.56□□□□□ -1.36
GPHN-213ENST00000556501 AKT1S1Q96B36 256 aa6.56□□□□□ -1.36
GPHN-213ENST00000556501 ANO2Q9NQ90 1003 aa6.56□□□□□ -1.36
GPHN-213ENST00000556501 PALD1Q9ULE6 856 aa6.56□□□□□ -1.36
GPHN-213ENST00000556501 MAP3K2Q9Y2U5 619 aa6.56□□□□□ -1.36
GPHN-213ENST00000556501 COL15A1P39059 1388 aa6.56□□□□□ -1.36
GPHN-213ENST00000556501 GLRX3O76003 335 aaKnown RBP6.55□□□□□ -1.36
GPHN-213ENST00000556501 PHKG2P15735 406 aa6.55□□□□□ -1.36
GPHN-213ENST00000556501 TATP17735 454 aaPredicted RBP6.55□□□□□ -1.36
GPHN-213ENST00000556501 HSPA4P34932 840 aa6.55□□□□□ -1.36
GPHN-213ENST00000556501 NEK4P51957 841 aa6.55□□□□□ -1.36
GPHN-213ENST00000556501 PDIA6Q15084 440 aa6.55□□□□□ -1.36
GPHN-213ENST00000556501 CNTROBQ8N137 903 aa6.55□□□□□ -1.36
GPHN-213ENST00000556501 ZGPATQ8N5A5 531 aaKnown RBP6.55□□□□□ -1.36
GPHN-213ENST00000556501 RAPGEF4Q8WZA2 1011 aa6.55□□□□□ -1.36
GPHN-213ENST00000556501 INTS4Q96HW7 963 aaKnown RBP6.55□□□□□ -1.36
GPHN-213ENST00000556501 TMX3Q96JJ7 454 aa6.55□□□□□ -1.36
GPHN-213ENST00000556501 LSG1Q9H089 658 aaKnown RBP6.55□□□□□ -1.36
GPHN-213ENST00000556501 IL25Q9H293 177 aa6.55□□□□□ -1.36
GPHN-213ENST00000556501 SLC52A2Q9HAB3 445 aa6.55□□□□□ -1.36
GPHN-213ENST00000556501 GRPEL1Q9HAV7 217 aa6.55□□□□□ -1.36
GPHN-213ENST00000556501 SPG7Q9UQ90 795 aa6.55□□□□□ -1.36
GPHN-213ENST00000556501 ZDHHC9Q9Y397 364 aa6.55□□□□□ -1.36
GPHN-213ENST00000556501 PRAMEF22A3QJZ6 481 aa6.54□□□□□ -1.36
GPHN-213ENST00000556501 GRM8O00222 908 aa6.54□□□□□ -1.36
GPHN-213ENST00000556501 STK25O00506 426 aa6.54□□□□□ -1.36
GPHN-213ENST00000556501 ATF3P18847 181 aa6.54□□□□□ -1.36
GPHN-213ENST00000556501 ZC3H6P61129 1189 aaKnown RBP6.54□□□□□ -1.36
GPHN-213ENST00000556501 OS9Q13438 667 aaPredicted RBP6.54□□□□□ -1.36
GPHN-213ENST00000556501 PKP1Q13835 747 aa6.54□□□□□ -1.36
GPHN-213ENST00000556501 CWF19L2Q2TBE0 894 aaKnown RBP6.54□□□□□ -1.36
GPHN-213ENST00000556501 ZNF790Q6PG37 636 aa6.54□□□□□ -1.36
GPHN-213ENST00000556501 GPATCH3Q96I76 525 aa6.54□□□□□ -1.36
GPHN-213ENST00000556501 PANK2Q9BZ23 570 aa6.54□□□□□ -1.36
GPHN-213ENST00000556501 LMBRD1Q9NUN5 540 aa6.54□□□□□ -1.36
GPHN-213ENST00000556501 NLRP2Q9NX02 1062 aa6.54□□□□□ -1.36
GPHN-213ENST00000556501 C9orf78Q9NZ63 289 aaPredicted RBP6.54□□□□□ -1.36
GPHN-213ENST00000556501 SPATA31A3Q5VYP0 1347 aa6.53□□□□□ -1.36
GPHN-213ENST00000556501 BRD1O95696 1058 aa6.53□□□□□ -1.36
GPHN-213ENST00000556501 MAP4K4O95819 1239 aaPredicted RBP6.53□□□□□ -1.36
GPHN-213ENST00000556501 NUBP1P53384 320 aa6.53□□□□□ -1.36
GPHN-213ENST00000556501 ZNF445P59923 1031 aa6.53□□□□□ -1.36
GPHN-213ENST00000556501 DCAF8Q5TAQ9 597 aa6.53□□□□□ -1.36
GPHN-213ENST00000556501 MCTP1Q6DN14 999 aa6.53□□□□□ -1.36
GPHN-213ENST00000556501 LARP1Q6PKG0 1096 aaKnown RBP6.53□□□□□ -1.36
GPHN-213ENST00000556501 CADPS2Q86UW7 1296 aa6.53□□□□□ -1.36
GPHN-213ENST00000556501 GAS2L3Q86XJ1 694 aa6.53□□□□□ -1.36
GPHN-213ENST00000556501 IFNL2Q8IZJ0 200 aa6.53□□□□□ -1.36
GPHN-213ENST00000556501 CLASRPQ8N2M8 674 aaKnown RBP6.53□□□□□ -1.36
GPHN-213ENST00000556501 RUFY2Q8WXA3 655 aa6.53□□□□□ -1.36
GPHN-213ENST00000556501 KAZALD1Q96I82 304 aa6.53□□□□□ -1.36
GPHN-213ENST00000556501 SUCLG2Q96I99 432 aa6.53□□□□□ -1.36
GPHN-213ENST00000556501 DCAF5Q96JK2 942 aa6.53□□□□□ -1.36
GPHN-213ENST00000556501 TTC14Q96N46 770 aa6.53□□□□□ -1.36
GPHN-213ENST00000556501 ECHDC1Q9NTX5 307 aa6.53□□□□□ -1.36
GPHN-213ENST00000556501 SNX14Q9Y5W7 946 aa6.53□□□□□ -1.36
GPHN-213ENST00000556501 DDX49Q9Y6V7 483 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms