RNA–Protein interactions for RNA: ENST00000556076.5

CHGA-204, Transcript of chromogranin A, humanhuman

TSL 5

Gene CHGA, Length 896 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-204ENST00000556076 PRELPP51888 382 aa21.3■■□□□ 1
CHGA-204ENST00000556076 WDR43Q15061 677 aaKnown RBP eCLIP21.3■■□□□ 1
CHGA-204ENST00000556076 CNBD1Q8NA66 436 aa21.3■■□□□ 1
CHGA-204ENST00000556076 SENP3-EIF4A1A0A087X0R7 540 aa21.29■■□□□ 1
CHGA-204ENST00000556076 TTLL7Q6ZT98 887 aa21.29■■□□□ 1
CHGA-204ENST00000556076 ZNF622Q969S3 477 aaKnown RBP eCLIP21.29■■□□□ 1
CHGA-204ENST00000556076 NPHP1O15259 732 aa21.28■■□□□ 1
CHGA-204ENST00000556076 TTLL6Q8N841 843 aa21.28■■□□□ 1
CHGA-204ENST00000556076 BRIP1Q9BX63 1249 aa21.28■■□□□ 1
CHGA-204ENST00000556076 RNF181Q9P0P0 153 aa21.28■■□□□ 1
CHGA-204ENST00000556076 TRIM35Q9UPQ4 493 aa21.28■■□□□ 1
CHGA-204ENST00000556076 NIP7Q9Y221 180 aaKnown RBP eCLIP21.28■■□□□ 1
CHGA-204ENST00000556076 NUP98P52948 1817 aa21.27■■□□□ 1
CHGA-204ENST00000556076 CCDC88AQ3V6T2 1871 aa21.27■■□□□ 1
CHGA-204ENST00000556076 ANXA1P04083 346 aa21.27■■□□□ 1
CHGA-204ENST00000556076 KRT24Q2M2I5 525 aa21.27■■□□□ 1
CHGA-204ENST00000556076 NBPF5PQ86XG9 351 aaPredicted RBP21.27■■□□□ 1
CHGA-204ENST00000556076 NECTIN2Q92692 538 aa21.27■■□□□ 1
CHGA-204ENST00000556076 RUNDC1Q96C34 613 aa21.27■■□□□ 1
CHGA-204ENST00000556076 CCDC184Q52MB2 194 aa21.26■□□□□ 0.99
CHGA-204ENST00000556076 NMRK2Q9NPI5 230 aa21.26■□□□□ 0.99
CHGA-204ENST00000556076 LAS1LQ9Y4W2 734 aaKnown RBP21.26■□□□□ 0.99
CHGA-204ENST00000556076 SLX4Q8IY92 1834 aa21.26■□□□□ 0.99
CHGA-204ENST00000556076 KIF3CO14782 793 aa21.25■□□□□ 0.99
CHGA-204ENST00000556076 EIF2S2P20042 333 aaKnown RBP21.25■□□□□ 0.99
CHGA-204ENST00000556076 PDE6BP35913 854 aa21.25■□□□□ 0.99
CHGA-204ENST00000556076 PROSER3Q2NL68 480 aa21.25■□□□□ 0.99
CHGA-204ENST00000556076 CLEC4GQ6UXB4 293 aa21.25■□□□□ 0.99
CHGA-204ENST00000556076 ZBTB3Q9H5J0 574 aa21.25■□□□□ 0.99
CHGA-204ENST00000556076 ZNF652Q9Y2D9 606 aa21.25■□□□□ 0.99
CHGA-204ENST00000556076 C21orf2O43822 256 aa21.24■□□□□ 0.99
CHGA-204ENST00000556076 ST5P78524 1137 aa21.24■□□□□ 0.99
CHGA-204ENST00000556076 NFKBIEO00221 500 aa21.23■□□□□ 0.99
CHGA-204ENST00000556076 GPTP24298 496 aa21.23■□□□□ 0.99
CHGA-204ENST00000556076 TNRC6CQ9HCJ0 1690 aaKnown RBP21.23■□□□□ 0.99
CHGA-204ENST00000556076 LMOD3Q0VAK6 560 aa21.22■□□□□ 0.99
CHGA-204ENST00000556076 PDIA6Q15084 440 aa21.22■□□□□ 0.99
CHGA-204ENST00000556076 MAP3K15Q6ZN16 1313 aa21.22■□□□□ 0.99
CHGA-204ENST00000556076 SRGNP10124 158 aa21.21■□□□□ 0.99
CHGA-204ENST00000556076 NUTM1Q86Y26 1132 aa21.21■□□□□ 0.99
CHGA-204ENST00000556076 LRP10Q7Z4F1 713 aa21.2■□□□□ 0.98
CHGA-204ENST00000556076 TIAM2Q8IVF5 1701 aa21.2■□□□□ 0.98
CHGA-204ENST00000556076 ABCC12Q96J65 1359 aa21.2■□□□□ 0.98
CHGA-204ENST00000556076 CHL1O00533 1208 aa21.19■□□□□ 0.98
CHGA-204ENST00000556076 PRPF40BQ6NWY9 871 aaKnown RBP21.19■□□□□ 0.98
CHGA-204ENST00000556076 OLFM4Q6UX06 510 aa21.19■□□□□ 0.98
CHGA-204ENST00000556076 KIF6Q6ZMV9 814 aa21.19■□□□□ 0.98
CHGA-204ENST00000556076 UBN2Q6ZU65 1347 aa21.19■□□□□ 0.98
CHGA-204ENST00000556076 FER1L6Q2WGJ9 1857 aa21.19■□□□□ 0.98
CHGA-204ENST00000556076 ARFGEF2Q9Y6D5 1785 aa21.18■□□□□ 0.98
CHGA-204ENST00000556076 APAF1O14727 1248 aa21.18■□□□□ 0.98
CHGA-204ENST00000556076 ERVV-1B6SEH8 477 aa21.17■□□□□ 0.98
CHGA-204ENST00000556076 LMNB1P20700 586 aa21.17■□□□□ 0.98
CHGA-204ENST00000556076 ERFEQ4G0M1 354 aa21.17■□□□□ 0.98
CHGA-204ENST00000556076 STYK1Q6J9G0 422 aa21.17■□□□□ 0.98
CHGA-204ENST00000556076 TPTE2Q6XPS3 522 aa21.17■□□□□ 0.98
CHGA-204ENST00000556076 ZNF428Q96B54 188 aa21.17■□□□□ 0.98
CHGA-204ENST00000556076 MASTLQ96GX5 879 aa21.17■□□□□ 0.98
CHGA-204ENST00000556076 AIMP1Q12904 312 aaKnown RBP21.16■□□□□ 0.98
CHGA-204ENST00000556076 SLC51AQ86UW1 340 aa21.16■□□□□ 0.98
CHGA-204ENST00000556076 GTF2E1P29083 439 aaPredicted RBP21.15■□□□□ 0.98
CHGA-204ENST00000556076 SUSD4Q5VX71 490 aa21.15■□□□□ 0.98
CHGA-204ENST00000556076 BABAM1Q9NWV8 329 aa21.15■□□□□ 0.98
CHGA-204ENST00000556076 PDZRN3Q9UPQ7 1066 aa21.15■□□□□ 0.98
CHGA-204ENST00000556076 ERBB4Q15303 1308 aa21.14■□□□□ 0.97
CHGA-204ENST00000556076 KLRG2A4D1S0 409 aaPredicted RBP21.14■□□□□ 0.97
CHGA-204ENST00000556076 RGL2O15211 777 aa21.14■□□□□ 0.97
CHGA-204ENST00000556076 XAGE3Q8WTP9 111 aa21.14■□□□□ 0.97
CHGA-204ENST00000556076 CNKSR1Q969H4 720 aa21.14■□□□□ 0.97
CHGA-204ENST00000556076 RRAGCQ9HB90 399 aa21.14■□□□□ 0.97
CHGA-204ENST00000556076 NPR1P16066 1061 aa21.13■□□□□ 0.97
CHGA-204ENST00000556076 GIGYF2Q6Y7W6 1299 aaKnown RBP21.13■□□□□ 0.97
CHGA-204ENST00000556076 C3orf67Q6ZVT6 689 aa21.13■□□□□ 0.97
CHGA-204ENST00000556076 ZNF34Q8IZ26 560 aa21.13■□□□□ 0.97
CHGA-204ENST00000556076 MBIPQ9NS73 344 aa21.13■□□□□ 0.97
CHGA-204ENST00000556076 CHPF2Q9P2E5 772 aa21.13■□□□□ 0.97
CHGA-204ENST00000556076 ZNF316A6NFI3 1004 aaPredicted RBP21.12■□□□□ 0.97
CHGA-204ENST00000556076 COPS6Q7L5N1 327 aa21.12■□□□□ 0.97
CHGA-204ENST00000556076 C7orf43Q8WVR3 580 aa21.12■□□□□ 0.97
CHGA-204ENST00000556076 DICER1Q9UPY3 1922 aaKnown RBP21.12■□□□□ 0.97
CHGA-204ENST00000556076 NTSR2O95665 410 aa21.11■□□□□ 0.97
CHGA-204ENST00000556076 ANKRD36CQ5JPF3 1778 aa21.1■□□□□ 0.97
CHGA-204ENST00000556076 SYNE4Q8N205 404 aa21.1■□□□□ 0.97
CHGA-204ENST00000556076 CFAP44Q96MT7 982 aa21.1■□□□□ 0.97
CHGA-204ENST00000556076 KDM2BQ8NHM5 1336 aa21.09■□□□□ 0.97
CHGA-204ENST00000556076 HSPA6P17066 643 aa21.09■□□□□ 0.97
CHGA-204ENST00000556076 HDGFL1Q5TGJ6 251 aa21.09■□□□□ 0.97
CHGA-204ENST00000556076 DUSP27Q5VZP5 1158 aa21.09■□□□□ 0.97
CHGA-204ENST00000556076 NYXQ9GZU5 481 aa21.09■□□□□ 0.97
CHGA-204ENST00000556076 TAOK3Q9H2K8 898 aa21.09■□□□□ 0.97
CHGA-204ENST00000556076 ELL2O00472 640 aaPredicted RBP21.08■□□□□ 0.97
CHGA-204ENST00000556076 TOMM70O94826 608 aa21.08■□□□□ 0.97
CHGA-204ENST00000556076 ZNF853P0CG23 659 aa21.08■□□□□ 0.97
CHGA-204ENST00000556076 DDX21Q9NR30 783 aaKnown RBP eCLIP21.08■□□□□ 0.97
CHGA-204ENST00000556076 LAMB2P55268 1798 aa21.06■□□□□ 0.96
CHGA-204ENST00000556076 GLTPD2A6NH11 291 aa21.06■□□□□ 0.96
CHGA-204ENST00000556076 TCERG1O14776 1098 aaKnown RBP21.06■□□□□ 0.96
CHGA-204ENST00000556076 CRY2Q49AN0 593 aa21.06■□□□□ 0.96
CHGA-204ENST00000556076 ZNF277Q9NRM2 450 aaPredicted RBP21.06■□□□□ 0.96
CHGA-204ENST00000556076 LTBP3Q9NS15 1303 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms