RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 KRTAP3-2Q9BYR7 98 aa9.05□□□□□ -0.96
PSEN1-216ENST00000556066 RIMBP2O15034 1052 aa9.04□□□□□ -0.96
PSEN1-216ENST00000556066 DIAPH1O60610 1272 aaKnown RBP9.04□□□□□ -0.96
PSEN1-216ENST00000556066 DOK7Q18PE1 504 aa9.04□□□□□ -0.96
PSEN1-216ENST00000556066 C4AP0C0L4 1744 aa9.03□□□□□ -0.96
PSEN1-216ENST00000556066 U2SURPO15042 1029 aaKnown RBP9.03□□□□□ -0.96
PSEN1-216ENST00000556066 MMP10P09238 476 aa9.03□□□□□ -0.96
PSEN1-216ENST00000556066 HSPA6P17066 643 aa9.03□□□□□ -0.96
PSEN1-216ENST00000556066 RFC4P35249 363 aa9.03□□□□□ -0.96
PSEN1-216ENST00000556066 AKAP4Q5JQC9 854 aa9.03□□□□□ -0.96
PSEN1-216ENST00000556066 RC3H1Q5TC82 1133 aaKnown RBP9.03□□□□□ -0.96
PSEN1-216ENST00000556066 ARHGEF1Q92888 912 aaKnown RBP9.03□□□□□ -0.96
PSEN1-216ENST00000556066 BOLA1Q9Y3E2 137 aa9.03□□□□□ -0.96
PSEN1-216ENST00000556066 N4BP2Q86UW6 1770 aaPredicted RBP9.03□□□□□ -0.96
PSEN1-216ENST00000556066 CNTNAP4Q9C0A0 1308 aa9.03□□□□□ -0.96
PSEN1-216ENST00000556066 TJP1Q07157 1748 aa9.02□□□□□ -0.96
PSEN1-216ENST00000556066 ADCY9O60503 1353 aa9.02□□□□□ -0.97
PSEN1-216ENST00000556066 RPS6KA4O75676 772 aa9.02□□□□□ -0.97
PSEN1-216ENST00000556066 CRKLP46109 303 aaKnown RBP9.02□□□□□ -0.97
PSEN1-216ENST00000556066 LGR6Q9HBX8 967 aa9.02□□□□□ -0.97
PSEN1-216ENST00000556066 RYDENQ9NUL5 291 aaKnown RBP9.02□□□□□ -0.97
PSEN1-216ENST00000556066 CICQ96RK0 1608 aaPredicted RBP9.02□□□□□ -0.97
PSEN1-216ENST00000556066 RNMTO43148 476 aaKnown RBP9.01□□□□□ -0.97
PSEN1-216ENST00000556066 MTHFSDQ2M296 383 aaKnown RBP9.01□□□□□ -0.97
PSEN1-216ENST00000556066 VSIG10Q8N0Z9 540 aa9.01□□□□□ -0.97
PSEN1-216ENST00000556066 NLGN1Q8N2Q7 840 aa9.01□□□□□ -0.97
PSEN1-216ENST00000556066 SLC52A2Q9HAB3 445 aa9.01□□□□□ -0.97
PSEN1-216ENST00000556066 GPBP1L1Q9HC44 474 aaPredicted RBP9.01□□□□□ -0.97
PSEN1-216ENST00000556066 KIF13BQ9NQT8 1826 aa9.01□□□□□ -0.97
PSEN1-216ENST00000556066 GYS1P13807 737 aa9□□□□□ -0.97
PSEN1-216ENST00000556066 SLC39A6Q13433 755 aa9□□□□□ -0.97
PSEN1-216ENST00000556066 ZNF526Q8TF50 670 aaPredicted RBP9□□□□□ -0.97
PSEN1-216ENST00000556066 SRP68Q9UHB9 627 aaKnown RBP9□□□□□ -0.97
PSEN1-216ENST00000556066 PARP3Q9Y6F1 533 aa9□□□□□ -0.97
PSEN1-216ENST00000556066 NPC1L1Q9UHC9 1359 aa8.99□□□□□ -0.97
PSEN1-216ENST00000556066 POTEB3A0JP26 581 aa8.99□□□□□ -0.97
PSEN1-216ENST00000556066 KIF3CO14782 793 aa8.99□□□□□ -0.97
PSEN1-216ENST00000556066 POTEBQ6S5H4 581 aa8.99□□□□□ -0.97
PSEN1-216ENST00000556066 DNAJC10Q8IXB1 793 aa8.99□□□□□ -0.97
PSEN1-216ENST00000556066 DNAJC5GQ8N7S2 189 aa8.99□□□□□ -0.97
PSEN1-216ENST00000556066 RNF166Q96A37 237 aaPredicted RBP8.99□□□□□ -0.97
PSEN1-216ENST00000556066 TSHZ2Q9NRE2 1034 aa8.99□□□□□ -0.97
PSEN1-216ENST00000556066 CCDC87Q9NVE4 849 aa8.99□□□□□ -0.97
PSEN1-216ENST00000556066 COL3A1P02461 1466 aaPredicted RBP8.99□□□□□ -0.97
PSEN1-216ENST00000556066 MRC1P22897 1456 aa8.98□□□□□ -0.97
PSEN1-216ENST00000556066 KIAA1551Q9HCM1 1747 aa8.98□□□□□ -0.97
PSEN1-216ENST00000556066 A0A0G2JLW4 131 aa8.98□□□□□ -0.97
PSEN1-216ENST00000556066 HOXB1P14653 301 aaPredicted RBP8.98□□□□□ -0.97
PSEN1-216ENST00000556066 TPRNQ4KMQ1 711 aa8.98□□□□□ -0.97
PSEN1-216ENST00000556066 INTS5Q6P9B9 1019 aaKnown RBP8.98□□□□□ -0.97
PSEN1-216ENST00000556066 CFAP53Q96M91 514 aa8.98□□□□□ -0.97
PSEN1-216ENST00000556066 ADAMTS7Q9UKP4 1686 aa8.97□□□□□ -0.97
PSEN1-216ENST00000556066 PXDNLA1KZ92 1463 aa8.97□□□□□ -0.97
PSEN1-216ENST00000556066 UBR2Q8IWV8 1755 aa8.97□□□□□ -0.97
PSEN1-216ENST00000556066 GNAT3A8MTJ3 354 aa8.97□□□□□ -0.97
PSEN1-216ENST00000556066 TULP1O00294 542 aaPredicted RBP8.97□□□□□ -0.97
PSEN1-216ENST00000556066 ZPR1O75312 459 aa8.97□□□□□ -0.97
PSEN1-216ENST00000556066 TEFQ10587 303 aa8.97□□□□□ -0.97
PSEN1-216ENST00000556066 TTC5Q8N0Z6 440 aa8.97□□□□□ -0.97
PSEN1-216ENST00000556066 BCS1LQ9Y276 419 aa8.97□□□□□ -0.97
PSEN1-216ENST00000556066 BRCA1P38398 1863 aaKnown RBP8.97□□□□□ -0.97
PSEN1-216ENST00000556066 USP42Q9H9J4 1324 aaKnown RBP8.97□□□□□ -0.97
PSEN1-216ENST00000556066 C10orf71Q711Q0 1435 aa8.97□□□□□ -0.97
PSEN1-216ENST00000556066 SIPA1L3O60292 1781 aaPredicted RBP8.96□□□□□ -0.97
PSEN1-216ENST00000556066 KCPQ6ZWJ8 1503 aa8.96□□□□□ -0.97
PSEN1-216ENST00000556066 CYP19A1P11511 503 aaPredicted RBP8.96□□□□□ -0.98
PSEN1-216ENST00000556066 DPEP1P16444 411 aa8.96□□□□□ -0.98
PSEN1-216ENST00000556066 PRKAR2BP31323 418 aa8.96□□□□□ -0.98
PSEN1-216ENST00000556066 TGFB2P61812 414 aa8.96□□□□□ -0.98
PSEN1-216ENST00000556066 EFCAB3Q8N7B9 438 aa8.96□□□□□ -0.98
PSEN1-216ENST00000556066 GAS2L2Q8NHY3 880 aa8.96□□□□□ -0.98
PSEN1-216ENST00000556066 MFRPQ9BY79 579 aa8.96□□□□□ -0.98
PSEN1-216ENST00000556066 AFDNP55196 1824 aaKnown RBP8.96□□□□□ -0.98
PSEN1-216ENST00000556066 FCHSD2O94868 740 aa8.95□□□□□ -0.98
PSEN1-216ENST00000556066 U2AF1L5P0DN76 240 aaPredicted RBP8.95□□□□□ -0.98
PSEN1-216ENST00000556066 CANXP27824 592 aaKnown RBP8.95□□□□□ -0.98
PSEN1-216ENST00000556066 U2AF1Q01081 240 aaKnown RBP eCLIP8.95□□□□□ -0.98
PSEN1-216ENST00000556066 DDR1Q08345 913 aa8.95□□□□□ -0.98
PSEN1-216ENST00000556066 USPL1Q5W0Q7 1092 aa8.95□□□□□ -0.98
PSEN1-216ENST00000556066 ARHGAP27Q6ZUM4 889 aa8.95□□□□□ -0.98
PSEN1-216ENST00000556066 IL17REQ8NFR9 667 aa8.95□□□□□ -0.98
PSEN1-216ENST00000556066 NUDCQ9Y266 331 aa8.95□□□□□ -0.98
PSEN1-216ENST00000556066 ZBTB1Q9Y2K1 713 aa8.95□□□□□ -0.98
PSEN1-216ENST00000556066 ZNF330Q9Y3S2 320 aaPredicted RBP8.95□□□□□ -0.98
PSEN1-216ENST00000556066 ARFGEF1Q9Y6D6 1849 aa8.95□□□□□ -0.98
PSEN1-216ENST00000556066 SOS1Q07889 1333 aaPredicted RBP8.95□□□□□ -0.98
PSEN1-216ENST00000556066 STARD3NLO95772 234 aa8.94□□□□□ -0.98
PSEN1-216ENST00000556066 PPP2R1AP30153 589 aa8.94□□□□□ -0.98
PSEN1-216ENST00000556066 ZEB1P37275 1124 aaPredicted RBP8.94□□□□□ -0.98
PSEN1-216ENST00000556066 APLP1P51693 650 aa8.94□□□□□ -0.98
PSEN1-216ENST00000556066 DPY19L2Q6NUT2 758 aa8.94□□□□□ -0.98
PSEN1-216ENST00000556066 ZNF790Q6PG37 636 aa8.94□□□□□ -0.98
PSEN1-216ENST00000556066 PHACTR3Q96KR7 559 aa8.94□□□□□ -0.98
PSEN1-216ENST00000556066 COL15A1P39059 1388 aa8.94□□□□□ -0.98
PSEN1-216ENST00000556066 HOXB3P14651 431 aaPredicted RBP8.93□□□□□ -0.98
PSEN1-216ENST00000556066 CHRNA5P30532 468 aa8.93□□□□□ -0.98
PSEN1-216ENST00000556066 ZNF496Q96IT1 587 aaPredicted RBP8.93□□□□□ -0.98
PSEN1-216ENST00000556066 RSPH6AQ9H0K4 717 aa8.93□□□□□ -0.98
PSEN1-216ENST00000556066 PIM2Q9P1W9 311 aa8.93□□□□□ -0.98
PSEN1-216ENST00000556066 NARFQ9UHQ1 456 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms