RNA–Protein interactions for RNA: ENST00000555737.5

RCCD1-204, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-204ENST00000555737 RIOK3O14730 519 aaKnown RBP21.2■□□□□ 0.98
RCCD1-204ENST00000555737 AACSQ86V21 672 aa21.2■□□□□ 0.98
RCCD1-204ENST00000555737 CWF19L2Q2TBE0 894 aaKnown RBP21.2■□□□□ 0.98
RCCD1-204ENST00000555737 LMOD2Q6P5Q4 547 aa21.2■□□□□ 0.98
RCCD1-204ENST00000555737 CDC37L1Q7L3B6 337 aa21.2■□□□□ 0.98
RCCD1-204ENST00000555737 CLASRPQ8N2M8 674 aaKnown RBP21.2■□□□□ 0.98
RCCD1-204ENST00000555737 ATP6V1DQ9Y5K8 247 aa21.2■□□□□ 0.98
RCCD1-204ENST00000555737 KLHDC4Q8TBB5 520 aa21.19■□□□□ 0.98
RCCD1-204ENST00000555737 TRIM5Q9C035 493 aa21.19■□□□□ 0.98
RCCD1-204ENST00000555737 BOLA2Q9H3K6 86 aa21.19■□□□□ 0.98
RCCD1-204ENST00000555737 MTMR6Q9Y217 621 aa21.19■□□□□ 0.98
RCCD1-204ENST00000555737 U2AF2P26368 475 aaKnown RBP eCLIP21.19■□□□□ 0.983e-10■■■□□ 17.3
RCCD1-204ENST00000555737 ATP2B3Q16720 1220 aa21.19■□□□□ 0.98
RCCD1-204ENST00000555737 KCNF1Q9H3M0 494 aa21.19■□□□□ 0.98
RCCD1-204ENST00000555737 ABTB2Q8N961 1025 aa21.18■□□□□ 0.98
RCCD1-204ENST00000555737 CCDC94Q9BW85 323 aaPredicted RBP21.18■□□□□ 0.98
RCCD1-204ENST00000555737 HYPKQ9NX55 129 aa21.18■□□□□ 0.98
RCCD1-204ENST00000555737 MPRIPQ6WCQ1 1025 aa21.18■□□□□ 0.98
RCCD1-204ENST00000555737 CCDC186Q7Z3E2 898 aa21.18■□□□□ 0.98
RCCD1-204ENST00000555737 BICD2Q8TD16 824 aa21.18■□□□□ 0.98
RCCD1-204ENST00000555737 SSH3Q8TE77 659 aa21.18■□□□□ 0.98
RCCD1-204ENST00000555737 EDC3Q96F86 508 aaKnown RBP21.18■□□□□ 0.98
RCCD1-204ENST00000555737 A2ML1A8K2U0 1454 aa21.18■□□□□ 0.98
RCCD1-204ENST00000555737 NAA30Q147X3 362 aaPredicted RBP21.18■□□□□ 0.98
RCCD1-204ENST00000555737 TTC14Q96N46 770 aa21.18■□□□□ 0.98
RCCD1-204ENST00000555737 DACT1Q9NYF0 836 aa21.18■□□□□ 0.98
RCCD1-204ENST00000555737 PRDM4Q9UKN5 801 aa21.18■□□□□ 0.98
RCCD1-204ENST00000555737 TAF6LQ9Y6J9 622 aa21.18■□□□□ 0.98
RCCD1-204ENST00000555737 CCDC192P0DO97 292 aa21.17■□□□□ 0.98
RCCD1-204ENST00000555737 TTC6Q86TZ1 520 aa21.17■□□□□ 0.98
RCCD1-204ENST00000555737 ZKSCAN1P17029 563 aaPredicted RBP21.17■□□□□ 0.98
RCCD1-204ENST00000555737 LRRC2Q9BYS8 371 aa21.16■□□□□ 0.98
RCCD1-204ENST00000555737 TPCN1Q9ULQ1 816 aa21.16■□□□□ 0.98
RCCD1-204ENST00000555737 HMGN5P82970 282 aaKnown RBP21.16■□□□□ 0.98
RCCD1-204ENST00000555737 UVSSAQ2YD98 709 aa21.16■□□□□ 0.98
RCCD1-204ENST00000555737 PDCL2Q8N4E4 241 aa21.16■□□□□ 0.98
RCCD1-204ENST00000555737 RIMS1Q86UR5 1692 aaKnown RBP21.16■□□□□ 0.98
RCCD1-204ENST00000555737 NPHP1O15259 732 aa21.16■□□□□ 0.98
RCCD1-204ENST00000555737 DNAAF4Q8WXU2 420 aa21.16■□□□□ 0.98
RCCD1-204ENST00000555737 NUP62CLQ9H1M0 184 aa21.16■□□□□ 0.98
RCCD1-204ENST00000555737 TNMDQ9H2S6 317 aa21.16■□□□□ 0.98
RCCD1-204ENST00000555737 RBM8AQ9Y5S9 174 aaKnown RBP21.16■□□□□ 0.98
RCCD1-204ENST00000555737 ANO6Q4KMQ2 910 aa21.15■□□□□ 0.98
RCCD1-204ENST00000555737 PREX1Q8TCU6 1659 aa21.15■□□□□ 0.98
RCCD1-204ENST00000555737 REREQ9P2R6 1566 aa21.15■□□□□ 0.98
RCCD1-204ENST00000555737 PRAMEF22A3QJZ6 481 aa21.14■□□□□ 0.98
RCCD1-204ENST00000555737 FGD1P98174 961 aa21.14■□□□□ 0.98
RCCD1-204ENST00000555737 MTERF4Q7Z6M4 381 aaKnown RBP21.14■□□□□ 0.98
RCCD1-204ENST00000555737 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.14■□□□□ 0.98
RCCD1-204ENST00000555737 V9GYY5 206 aaPredicted RBP21.14■□□□□ 0.98
RCCD1-204ENST00000555737 HSP90B1P14625 803 aaKnown RBP21.14■□□□□ 0.97
RCCD1-204ENST00000555737 FSD1Q9BTV5 496 aa21.14■□□□□ 0.97
RCCD1-204ENST00000555737 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.14■□□□□ 0.97
RCCD1-204ENST00000555737 CHGBP05060 677 aa21.13■□□□□ 0.97
RCCD1-204ENST00000555737 TEFQ10587 303 aa21.13■□□□□ 0.97
RCCD1-204ENST00000555737 ERCC4Q92889 916 aaPredicted RBP21.13■□□□□ 0.97
RCCD1-204ENST00000555737 LTKP29376 864 aa21.13■□□□□ 0.97
RCCD1-204ENST00000555737 MAP3K11Q16584 847 aa21.13■□□□□ 0.97
RCCD1-204ENST00000555737 RUFY2Q8WXA3 655 aa21.13■□□□□ 0.97
RCCD1-204ENST00000555737 PRIMPOLQ96LW4 560 aa21.13■□□□□ 0.97
RCCD1-204ENST00000555737 GLRX3O76003 335 aaKnown RBP21.13■□□□□ 0.97
RCCD1-204ENST00000555737 LETM1O95202 739 aaPredicted RBP21.13■□□□□ 0.97
RCCD1-204ENST00000555737 HDGFP51858 240 aaKnown RBP21.13■□□□□ 0.97
RCCD1-204ENST00000555737 KRT85P78386 507 aa21.13■□□□□ 0.97
RCCD1-204ENST00000555737 TLR7Q9NYK1 1049 aaKnown RBP21.13■□□□□ 0.97
RCCD1-204ENST00000555737 TYRO3Q06418 890 aa21.12■□□□□ 0.97
RCCD1-204ENST00000555737 NMIQ13287 307 aaPredicted RBP21.12■□□□□ 0.97
RCCD1-204ENST00000555737 SPATA32Q96LK8 384 aa21.12■□□□□ 0.97
RCCD1-204ENST00000555737 DNAJC25Q9H1X3 360 aa21.12■□□□□ 0.97
RCCD1-204ENST00000555737 AMOTL2Q9Y2J4 779 aa21.12■□□□□ 0.97
RCCD1-204ENST00000555737 LARP1Q6PKG0 1096 aaKnown RBP21.12■□□□□ 0.97
RCCD1-204ENST00000555737 PIP4K2AP48426 406 aaPredicted RBP21.11■□□□□ 0.97
RCCD1-204ENST00000555737 ST3GAL1Q11201 340 aa21.11■□□□□ 0.97
RCCD1-204ENST00000555737 LRRC59Q96AG4 307 aaKnown RBP21.11■□□□□ 0.97
RCCD1-204ENST00000555737 MAP3K2Q9Y2U5 619 aa21.11■□□□□ 0.97
RCCD1-204ENST00000555737 GOLGA6L6A8MZA4 724 aa21.11■□□□□ 0.97
RCCD1-204ENST00000555737 PROSER3Q2NL68 480 aa21.11■□□□□ 0.97
RCCD1-204ENST00000555737 KIAA1524Q8TCG1 905 aa21.11■□□□□ 0.97
RCCD1-204ENST00000555737 CLTCQ00610 1675 aaKnown RBP21.11■□□□□ 0.97
RCCD1-204ENST00000555737 CREB3L3Q68CJ9 461 aa21.11■□□□□ 0.97
RCCD1-204ENST00000555737 ECHDC1Q9NTX5 307 aa21.11■□□□□ 0.97
RCCD1-204ENST00000555737 FLT4P35916 1363 aa21.11■□□□□ 0.97
RCCD1-204ENST00000555737 JAK2O60674 1132 aa21.1■□□□□ 0.97
RCCD1-204ENST00000555737 HOXC9P31274 260 aa21.09■□□□□ 0.97
RCCD1-204ENST00000555737 BLOC1S2Q6QNY1 142 aa21.09■□□□□ 0.97
RCCD1-204ENST00000555737 SYTL4Q96C24 671 aaPredicted RBP21.09■□□□□ 0.97
RCCD1-204ENST00000555737 NEO1Q92859 1461 aa21.08■□□□□ 0.97
RCCD1-204ENST00000555737 BTBD11A6QL63 1104 aa21.08■□□□□ 0.97
RCCD1-204ENST00000555737 ARID5BQ14865 1188 aa21.08■□□□□ 0.97
RCCD1-204ENST00000555737 CBX8Q9HC52 389 aa21.08■□□□□ 0.97
RCCD1-204ENST00000555737 A0A0D9SFI3 127 aa21.08■□□□□ 0.96
RCCD1-204ENST00000555737 GUCY1B3Q02153 619 aa21.08■□□□□ 0.96
RCCD1-204ENST00000555737 FILIP1Q7Z7B0 1213 aa21.08■□□□□ 0.96
RCCD1-204ENST00000555737 GPATCH3Q96I76 525 aa21.08■□□□□ 0.96
RCCD1-204ENST00000555737 TRMT1Q9NXH9 659 aaKnown RBP21.08■□□□□ 0.96
RCCD1-204ENST00000555737 CEP170BQ9Y4F5 1589 aaPredicted RBP21.08■□□□□ 0.96
RCCD1-204ENST00000555737 USP6P35125 1406 aa21.08■□□□□ 0.96
RCCD1-204ENST00000555737 NR1I2O75469 434 aa21.07■□□□□ 0.96
RCCD1-204ENST00000555737 TPD52L1Q16890 204 aaPredicted RBP21.07■□□□□ 0.96
RCCD1-204ENST00000555737 BEND3Q5T5X7 828 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms