RNA–Protein interactions for RNA: ENST00000555436.1

CBLN3-202, Transcript of cerebellin 3 precursor, humanhuman

TSL 3 BASIC

Gene CBLN3, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBLN3-202ENST00000555436 ST5P78524 1137 aa25.53■■□□□ 1.68
CBLN3-202ENST00000555436 C9orf131Q5VYM1 1079 aa25.53■■□□□ 1.68
CBLN3-202ENST00000555436 NBPF5PQ86XG9 351 aaPredicted RBP25.52■■□□□ 1.68
CBLN3-202ENST00000555436 TRIM35Q9UPQ4 493 aa25.51■■□□□ 1.67
CBLN3-202ENST00000555436 NIP7Q9Y221 180 aaKnown RBP eCLIP25.51■■□□□ 1.67
CBLN3-202ENST00000555436 ERBB4Q15303 1308 aa25.51■■□□□ 1.67
CBLN3-202ENST00000555436 ERVV-1B6SEH8 477 aa25.5■■□□□ 1.67
CBLN3-202ENST00000555436 HLFQ16534 295 aa25.5■■□□□ 1.67
CBLN3-202ENST00000555436 NGEFQ8N5V2 710 aa25.5■■□□□ 1.67
CBLN3-202ENST00000555436 ZNF622Q969S3 477 aaKnown RBP eCLIP25.5■■□□□ 1.67
CBLN3-202ENST00000555436 DLEC1Q9Y238 1755 aa25.5■■□□□ 1.67
CBLN3-202ENST00000555436 MYL6BP14649 208 aa25.49■■□□□ 1.67
CBLN3-202ENST00000555436 ANKRD31Q8N7Z5 1873 aa25.49■■□□□ 1.67
CBLN3-202ENST00000555436 MAP3K15Q6ZN16 1313 aa25.48■■□□□ 1.67
CBLN3-202ENST00000555436 TPTE2Q6XPS3 522 aa25.48■■□□□ 1.67
CBLN3-202ENST00000555436 CHL1O00533 1208 aa25.47■■□□□ 1.67
CBLN3-202ENST00000555436 KIF6Q6ZMV9 814 aa25.47■■□□□ 1.67
CBLN3-202ENST00000555436 TTLL7Q6ZT98 887 aa25.47■■□□□ 1.67
CBLN3-202ENST00000555436 RNF181Q9P0P0 153 aa25.47■■□□□ 1.67
CBLN3-202ENST00000555436 SRGNP10124 158 aa25.46■■□□□ 1.67
CBLN3-202ENST00000555436 STYK1Q6J9G0 422 aa25.46■■□□□ 1.67
CBLN3-202ENST00000555436 EIF2S2P20042 333 aaKnown RBP25.45■■□□□ 1.66
CBLN3-202ENST00000555436 RASSF7Q02833 373 aa25.45■■□□□ 1.66
CBLN3-202ENST00000555436 KIF3CO14782 793 aa25.44■■□□□ 1.66
CBLN3-202ENST00000555436 PDIA6Q15084 440 aa25.44■■□□□ 1.66
CBLN3-202ENST00000555436 LRP10Q7Z4F1 713 aa25.44■■□□□ 1.66
CBLN3-202ENST00000555436 CNKSR1Q969H4 720 aa25.44■■□□□ 1.66
CBLN3-202ENST00000555436 MASTLQ96GX5 879 aa25.44■■□□□ 1.66
CBLN3-202ENST00000555436 SENP3-EIF4A1A0A087X0R7 540 aa25.43■■□□□ 1.66
CBLN3-202ENST00000555436 KLRG2A4D1S0 409 aaPredicted RBP25.43■■□□□ 1.66
CBLN3-202ENST00000555436 ZBTB3Q9H5J0 574 aa25.43■■□□□ 1.66
CBLN3-202ENST00000555436 COL11A2P13942 1736 aaPredicted RBP25.43■■□□□ 1.66
CBLN3-202ENST00000555436 FAM177BA6PVY3 158 aa25.42■■□□□ 1.66
CBLN3-202ENST00000555436 NFKBIEO00221 500 aa25.42■■□□□ 1.66
CBLN3-202ENST00000555436 LMNB1P20700 586 aa25.42■■□□□ 1.66
CBLN3-202ENST00000555436 LAS1LQ9Y4W2 734 aaKnown RBP25.42■■□□□ 1.66
CBLN3-202ENST00000555436 C21orf2O43822 256 aa25.41■■□□□ 1.66
CBLN3-202ENST00000555436 ZC3H4Q9UPT8 1303 aaKnown RBP25.4■■□□□ 1.66
CBLN3-202ENST00000555436 APAF1O14727 1248 aa25.4■■□□□ 1.66
CBLN3-202ENST00000555436 GTF2E1P29083 439 aaPredicted RBP25.4■■□□□ 1.66
CBLN3-202ENST00000555436 PRELPP51888 382 aa25.4■■□□□ 1.66
CBLN3-202ENST00000555436 PROSER3Q2NL68 480 aa25.4■■□□□ 1.66
CBLN3-202ENST00000555436 PRPF40BQ6NWY9 871 aaKnown RBP25.4■■□□□ 1.66
CBLN3-202ENST00000555436 NYXQ9GZU5 481 aa25.4■■□□□ 1.66
CBLN3-202ENST00000555436 ZNF316A6NFI3 1004 aaPredicted RBP25.39■■□□□ 1.66
CBLN3-202ENST00000555436 NPR1P16066 1061 aa25.39■■□□□ 1.66
CBLN3-202ENST00000555436 KRT24Q2M2I5 525 aa25.39■■□□□ 1.66
CBLN3-202ENST00000555436 GIGYF2Q6Y7W6 1299 aaKnown RBP25.39■■□□□ 1.66
CBLN3-202ENST00000555436 CFAP44Q96MT7 982 aa25.39■■□□□ 1.66
CBLN3-202ENST00000555436 ZNF219Q9P2Y4 722 aaPredicted RBP25.39■■□□□ 1.66
CBLN3-202ENST00000555436 ZNF34Q8IZ26 560 aa25.38■■□□□ 1.65
CBLN3-202ENST00000555436 NMRK2Q9NPI5 230 aa25.38■■□□□ 1.65
CBLN3-202ENST00000555436 IBTKQ9P2D0 1353 aaPredicted RBP25.38■■□□□ 1.65
CBLN3-202ENST00000555436 UBN2Q6ZU65 1347 aa25.37■■□□□ 1.65
CBLN3-202ENST00000555436 KDM2BQ8NHM5 1336 aa25.37■■□□□ 1.65
CBLN3-202ENST00000555436 ANXA1P04083 346 aa25.37■■□□□ 1.65
CBLN3-202ENST00000555436 GPTP24298 496 aa25.37■■□□□ 1.65
CBLN3-202ENST00000555436 NECTIN2Q92692 538 aa25.37■■□□□ 1.65
CBLN3-202ENST00000555436 HOXB7P09629 217 aa25.36■■□□□ 1.65
CBLN3-202ENST00000555436 SOGA3Q5TF21 947 aa25.36■■□□□ 1.65
CBLN3-202ENST00000555436 SBF1O95248 1867 aa25.36■■□□□ 1.65
CBLN3-202ENST00000555436 ABCC12Q96J65 1359 aa25.35■■□□□ 1.65
CBLN3-202ENST00000555436 CCDC184Q52MB2 194 aa25.35■■□□□ 1.65
CBLN3-202ENST00000555436 NUTM1Q86Y26 1132 aa25.35■■□□□ 1.65
CBLN3-202ENST00000555436 C7orf43Q8WVR3 580 aa25.35■■□□□ 1.65
CBLN3-202ENST00000555436 DDX21Q9NR30 783 aaKnown RBP eCLIP25.35■■□□□ 1.65
CBLN3-202ENST00000555436 LTBP3Q9NS15 1303 aa25.35■■□□□ 1.65
CBLN3-202ENST00000555436 ZNF853P0CG23 659 aa25.34■■□□□ 1.65
CBLN3-202ENST00000555436 CALD1Q05682 793 aaKnown RBP25.34■■□□□ 1.65
CBLN3-202ENST00000555436 ERFEQ4G0M1 354 aa25.34■■□□□ 1.65
CBLN3-202ENST00000555436 SUSD4Q5VX71 490 aa25.34■■□□□ 1.65
CBLN3-202ENST00000555436 COPS6Q7L5N1 327 aa25.34■■□□□ 1.65
CBLN3-202ENST00000555436 MBIPQ9NS73 344 aa25.34■■□□□ 1.65
CBLN3-202ENST00000555436 NUP98P52948 1817 aa25.33■■□□□ 1.65
CBLN3-202ENST00000555436 TOMM70O94826 608 aa25.33■■□□□ 1.65
CBLN3-202ENST00000555436 CRY2Q49AN0 593 aa25.33■■□□□ 1.65
CBLN3-202ENST00000555436 PARP10Q53GL7 1025 aa25.33■■□□□ 1.65
CBLN3-202ENST00000555436 XAGE3Q8WTP9 111 aa25.33■■□□□ 1.65
CBLN3-202ENST00000555436 TAOK3Q9H2K8 898 aa25.33■■□□□ 1.65
CBLN3-202ENST00000555436 IFT57Q9NWB7 429 aa25.33■■□□□ 1.65
CBLN3-202ENST00000555436 SLX4Q8IY92 1834 aa25.33■■□□□ 1.64
CBLN3-202ENST00000555436 RIC1Q4ADV7 1423 aa25.32■■□□□ 1.64
CBLN3-202ENST00000555436 HDGFL1Q5TGJ6 251 aa25.32■■□□□ 1.64
CBLN3-202ENST00000555436 CHPF2Q9P2E5 772 aa25.32■■□□□ 1.64
CBLN3-202ENST00000555436 NTSR2O95665 410 aa25.31■■□□□ 1.64
CBLN3-202ENST00000555436 ALDH1B1P30837 517 aa25.31■■□□□ 1.64
CBLN3-202ENST00000555436 AIMP1Q12904 312 aaKnown RBP25.31■■□□□ 1.64
CBLN3-202ENST00000555436 PPP1R42Q7Z4L9 355 aa25.31■■□□□ 1.64
CBLN3-202ENST00000555436 GNAI1P63096 354 aa25.3■■□□□ 1.64
CBLN3-202ENST00000555436 DUSP27Q5VZP5 1158 aa25.3■■□□□ 1.64
CBLN3-202ENST00000555436 GLTPD2A6NH11 291 aa25.29■■□□□ 1.64
CBLN3-202ENST00000555436 HSPA6P17066 643 aa25.29■■□□□ 1.64
CBLN3-202ENST00000555436 CCDC93Q567U6 631 aa25.29■■□□□ 1.64
CBLN3-202ENST00000555436 HSP90AB3PQ58FF7 597 aa25.29■■□□□ 1.64
CBLN3-202ENST00000555436 DBF4Q9UBU7 674 aaPredicted RBP25.29■■□□□ 1.64
CBLN3-202ENST00000555436 ARFGEF2Q9Y6D5 1785 aa25.28■■□□□ 1.64
CBLN3-202ENST00000555436 ANP32CO43423 234 aa25.28■■□□□ 1.64
CBLN3-202ENST00000555436 UTP14AQ9BVJ6 771 aaKnown RBP25.28■■□□□ 1.64
CBLN3-202ENST00000555436 RRAGCQ9HB90 399 aa25.28■■□□□ 1.64
CBLN3-202ENST00000555436 FER1L6Q2WGJ9 1857 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms