RNA–Protein interactions for RNA: ENST00000555170.1

TRIM9-204, Transcript of tripartite motif containing 9, humanhuman

TSL 4

Gene TRIM9, Length 554 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-204ENST00000555170 ZC3H4Q9UPT8 1303 aaKnown RBP11.05□□□□□ -0.64
TRIM9-204ENST00000555170 CNTNAP1P78357 1384 aa11.04□□□□□ -0.64
TRIM9-204ENST00000555170 LMNB1P20700 586 aa11.04□□□□□ -0.64
TRIM9-204ENST00000555170 RFC4P35249 363 aa11.04□□□□□ -0.64
TRIM9-204ENST00000555170 LMOD3Q0VAK6 560 aa11.04□□□□□ -0.64
TRIM9-204ENST00000555170 COL15A1P39059 1388 aa11.03□□□□□ -0.64
TRIM9-204ENST00000555170 POTEIP0CG38 1075 aa11.03□□□□□ -0.64
TRIM9-204ENST00000555170 POTEJP0CG39 1038 aa11.03□□□□□ -0.64
TRIM9-204ENST00000555170 CHADLQ6NUI6 762 aa11.03□□□□□ -0.64
TRIM9-204ENST00000555170 HSPA8P11142 646 aaKnown RBP11.02□□□□□ -0.65
TRIM9-204ENST00000555170 PIP4K2AP48426 406 aaPredicted RBP11.02□□□□□ -0.65
TRIM9-204ENST00000555170 EIF4A1P60842 406 aaKnown RBP11.02□□□□□ -0.65
TRIM9-204ENST00000555170 DDR1Q08345 913 aa11.02□□□□□ -0.65
TRIM9-204ENST00000555170 SRP68Q9UHB9 627 aaKnown RBP11.02□□□□□ -0.65
TRIM9-204ENST00000555170 TSPYL4Q9UJ04 414 aa11.02□□□□□ -0.65
TRIM9-204ENST00000555170 USP16Q9Y5T5 823 aa11.02□□□□□ -0.65
TRIM9-204ENST00000555170 USP42Q9H9J4 1324 aaKnown RBP11.02□□□□□ -0.65
TRIM9-204ENST00000555170 AFDNP55196 1824 aaKnown RBP11.02□□□□□ -0.65
TRIM9-204ENST00000555170 A1BGP04217 495 aa11.01□□□□□ -0.65
TRIM9-204ENST00000555170 ADRA2BP18089 450 aa11.01□□□□□ -0.65
TRIM9-204ENST00000555170 CANXP27824 592 aaKnown RBP11.01□□□□□ -0.65
TRIM9-204ENST00000555170 FKBP8Q14318 412 aa11.01□□□□□ -0.65
TRIM9-204ENST00000555170 DPY19L2Q6NUT2 758 aa11.01□□□□□ -0.65
TRIM9-204ENST00000555170 FAM9BQ8IZU0 186 aa11.01□□□□□ -0.65
TRIM9-204ENST00000555170 NRXN2Q9P2S2 1712 aa11.01□□□□□ -0.65
TRIM9-204ENST00000555170 SNRPA1P09661 255 aaKnown RBP11□□□□□ -0.65
TRIM9-204ENST00000555170 KRT24Q2M2I5 525 aa11□□□□□ -0.65
TRIM9-204ENST00000555170 NBPF26B4DH59 902 aa10.99□□□□□ -0.65
TRIM9-204ENST00000555170 CHL1O00533 1208 aa10.99□□□□□ -0.65
TRIM9-204ENST00000555170 STARD3NLO95772 234 aa10.99□□□□□ -0.65
TRIM9-204ENST00000555170 EIF5P55010 431 aaKnown RBP10.99□□□□□ -0.65
TRIM9-204ENST00000555170 NBPF10Q6P3W6 841 aaKnown RBP10.99□□□□□ -0.65
TRIM9-204ENST00000555170 NBPF15Q8N660 670 aa10.99□□□□□ -0.65
TRIM9-204ENST00000555170 TEX13AQ9BXU3 409 aaPredicted RBP10.99□□□□□ -0.65
TRIM9-204ENST00000555170 LAS1LQ9Y4W2 734 aaKnown RBP10.99□□□□□ -0.65
TRIM9-204ENST00000555170 PASKQ96RG2 1323 aa10.99□□□□□ -0.65
TRIM9-204ENST00000555170 NFKBIEO00221 500 aa10.98□□□□□ -0.65
TRIM9-204ENST00000555170 ZNF853P0CG23 659 aa10.98□□□□□ -0.65
TRIM9-204ENST00000555170 USPL1Q5W0Q7 1092 aa10.98□□□□□ -0.65
TRIM9-204ENST00000555170 DIEXFQ68CQ4 756 aaKnown RBP10.98□□□□□ -0.65
TRIM9-204ENST00000555170 BCL2L12Q9HB09 334 aa10.98□□□□□ -0.65
TRIM9-204ENST00000555170 BABAM1Q9NWV8 329 aa10.98□□□□□ -0.65
TRIM9-204ENST00000555170 ZNF330Q9Y3S2 320 aaPredicted RBP10.98□□□□□ -0.65
TRIM9-204ENST00000555170 NUP98P52948 1817 aa10.98□□□□□ -0.65
TRIM9-204ENST00000555170 TMEM88BA6NKF7 163 aa10.97□□□□□ -0.65
TRIM9-204ENST00000555170 POLRMTO00411 1230 aaKnown RBP10.97□□□□□ -0.65
TRIM9-204ENST00000555170 TM4SF1P30408 202 aa10.97□□□□□ -0.65
TRIM9-204ENST00000555170 IL6STP40189 918 aaPredicted RBP10.97□□□□□ -0.65
TRIM9-204ENST00000555170 CFAP44Q96MT7 982 aa10.97□□□□□ -0.65
TRIM9-204ENST00000555170 MBIPQ9NS73 344 aa10.97□□□□□ -0.65
TRIM9-204ENST00000555170 NARFQ9UHQ1 456 aa10.97□□□□□ -0.65
TRIM9-204ENST00000555170 ANKRD31Q8N7Z5 1873 aa10.97□□□□□ -0.65
TRIM9-204ENST00000555170 TNRC18O15417 2968 aaPredicted RBP10.97□□□□□ -0.65
TRIM9-204ENST00000555170 ANKRD36CQ5JPF3 1778 aa10.96□□□□□ -0.65
TRIM9-204ENST00000555170 CCER2I3L3R5 266 aa10.96□□□□□ -0.65
TRIM9-204ENST00000555170 DDNO94850 711 aaPredicted RBP10.96□□□□□ -0.65
TRIM9-204ENST00000555170 ITGBL1O95965 494 aaPredicted RBP10.96□□□□□ -0.65
TRIM9-204ENST00000555170 CCDC27Q2M243 656 aa10.96□□□□□ -0.65
TRIM9-204ENST00000555170 WWC1Q8IX03 1113 aa10.96□□□□□ -0.65
TRIM9-204ENST00000555170 TTLL6Q8N841 843 aa10.96□□□□□ -0.65
TRIM9-204ENST00000555170 IFT57Q9NWB7 429 aa10.96□□□□□ -0.65
TRIM9-204ENST00000555170 SALL2Q9Y467 1007 aaPredicted RBP10.96□□□□□ -0.65
TRIM9-204ENST00000555170 DLEC1Q9Y238 1755 aa10.95□□□□□ -0.66
TRIM9-204ENST00000555170 COL11A2P13942 1736 aaPredicted RBP10.95□□□□□ -0.66
TRIM9-204ENST00000555170 DEFB115Q30KQ5 88 aa10.95□□□□□ -0.66
TRIM9-204ENST00000555170 ERFEQ4G0M1 354 aa10.95□□□□□ -0.66
TRIM9-204ENST00000555170 MIER1Q8N108 512 aa10.95□□□□□ -0.66
TRIM9-204ENST00000555170 TBC1D2BQ9UPU7 963 aa10.95□□□□□ -0.66
TRIM9-204ENST00000555170 CCDC88AQ3V6T2 1871 aa10.94□□□□□ -0.66
TRIM9-204ENST00000555170 ZPR1O75312 459 aa10.94□□□□□ -0.66
TRIM9-204ENST00000555170 CAMTA2O94983 1202 aa10.94□□□□□ -0.66
TRIM9-204ENST00000555170 MAP2K1Q02750 393 aaPredicted RBP10.94□□□□□ -0.66
TRIM9-204ENST00000555170 PROSER3Q2NL68 480 aa10.94□□□□□ -0.66
TRIM9-204ENST00000555170 LRP10Q7Z4F1 713 aa10.94□□□□□ -0.66
TRIM9-204ENST00000555170 DZIP3Q86Y13 1208 aaKnown RBP10.94□□□□□ -0.66
TRIM9-204ENST00000555170 TSR2Q969E8 191 aaKnown RBP10.94□□□□□ -0.66
TRIM9-204ENST00000555170 ARFGEF2Q9Y6D5 1785 aa10.94□□□□□ -0.66
TRIM9-204ENST00000555170 TIAM2Q8IVF5 1701 aa10.94□□□□□ -0.66
TRIM9-204ENST00000555170 CARMIL3Q8ND23 1372 aa10.93□□□□□ -0.66
TRIM9-204ENST00000555170 WDR33Q9C0J8 1336 aaKnown RBP10.93□□□□□ -0.66
TRIM9-204ENST00000555170 A0A087WZG4 1122 aa10.93□□□□□ -0.66
TRIM9-204ENST00000555170 RASSF10A6NK89 507 aa10.93□□□□□ -0.66
TRIM9-204ENST00000555170 ANXA1P04083 346 aa10.93□□□□□ -0.66
TRIM9-204ENST00000555170 MYL6BP14649 208 aa10.93□□□□□ -0.66
TRIM9-204ENST00000555170 EIF2S2P20042 333 aaKnown RBP10.93□□□□□ -0.66
TRIM9-204ENST00000555170 GNAI1P63096 354 aa10.93□□□□□ -0.66
TRIM9-204ENST00000555170 CALD1Q05682 793 aaKnown RBP10.93□□□□□ -0.66
TRIM9-204ENST00000555170 NFIXQ14938 502 aa10.93□□□□□ -0.66
TRIM9-204ENST00000555170 PDIA6Q15084 440 aa10.93□□□□□ -0.66
TRIM9-204ENST00000555170 NCBP3Q53F19 620 aaKnown RBP10.93□□□□□ -0.66
TRIM9-204ENST00000555170 LDHDQ86WU2 507 aa10.93□□□□□ -0.66
TRIM9-204ENST00000555170 NECTIN2Q92692 538 aa10.93□□□□□ -0.66
TRIM9-204ENST00000555170 ZNF219Q9P2Y4 722 aaPredicted RBP10.93□□□□□ -0.66
TRIM9-204ENST00000555170 ERBB4Q15303 1308 aa10.92□□□□□ -0.66
TRIM9-204ENST00000555170 TBC1D9BQ66K14 1250 aa10.92□□□□□ -0.66
TRIM9-204ENST00000555170 C2CD5Q86YS7 1000 aa10.92□□□□□ -0.66
TRIM9-204ENST00000555170 NGEFQ8N5V2 710 aa10.92□□□□□ -0.66
TRIM9-204ENST00000555170 SPINK5Q9NQ38 1064 aaPredicted RBP10.92□□□□□ -0.66
TRIM9-204ENST00000555170 CACNA1SQ13698 1873 aa10.91□□□□□ -0.66
TRIM9-204ENST00000555170 IL16Q14005 1332 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms