RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 ZNF831Q5JPB2 1677 aa13.66□□□□□ -0.22
TMEM260-206ENST00000555046 E9PSI1 815 aa13.66□□□□□ -0.22
TMEM260-206ENST00000555046 GYS1P13807 737 aa13.66□□□□□ -0.22
TMEM260-206ENST00000555046 CCDC30Q5VVM6 783 aa13.66□□□□□ -0.22
TMEM260-206ENST00000555046 AMIGO3Q86WK7 504 aa13.66□□□□□ -0.22
TMEM260-206ENST00000555046 DZIP3Q86Y13 1208 aaKnown RBP13.66□□□□□ -0.22
TMEM260-206ENST00000555046 CNKSR2Q8WXI2 1034 aa13.66□□□□□ -0.22
TMEM260-206ENST00000555046 C10orf71Q711Q0 1435 aa13.65□□□□□ -0.22
TMEM260-206ENST00000555046 USPL1Q5W0Q7 1092 aa13.65□□□□□ -0.22
TMEM260-206ENST00000555046 MSL1Q68DK7 614 aa13.65□□□□□ -0.22
TMEM260-206ENST00000555046 KIF6Q6ZMV9 814 aa13.65□□□□□ -0.22
TMEM260-206ENST00000555046 SMIM5Q71RC9 77 aa13.65□□□□□ -0.22
TMEM260-206ENST00000555046 C16orf71Q8IYS4 520 aaPredicted RBP13.65□□□□□ -0.22
TMEM260-206ENST00000555046 DDX21Q9NR30 783 aaKnown RBP eCLIP13.65□□□□□ -0.22
TMEM260-206ENST00000555046 HYPKQ9NX55 129 aa13.65□□□□□ -0.22
TMEM260-206ENST00000555046 TBC1D2BQ9UPU7 963 aa13.65□□□□□ -0.22
TMEM260-206ENST00000555046 PARP3Q9Y6F1 533 aa13.65□□□□□ -0.22
TMEM260-206ENST00000555046 COL15A1P39059 1388 aa13.65□□□□□ -0.22
TMEM260-206ENST00000555046 C4BP0C0L5 1744 aa13.64□□□□□ -0.23
TMEM260-206ENST00000555046 NBPF26B4DH59 902 aa13.64□□□□□ -0.23
TMEM260-206ENST00000555046 ERVV-1B6SEH8 477 aa13.64□□□□□ -0.23
TMEM260-206ENST00000555046 ELL2O00472 640 aaPredicted RBP13.64□□□□□ -0.23
TMEM260-206ENST00000555046 MYL6BP14649 208 aa13.64□□□□□ -0.23
TMEM260-206ENST00000555046 NBPF10Q6P3W6 841 aaKnown RBP13.64□□□□□ -0.23
TMEM260-206ENST00000555046 NBPF15Q8N660 670 aa13.64□□□□□ -0.23
TMEM260-206ENST00000555046 FOXN1O15353 648 aa13.63□□□□□ -0.23
TMEM260-206ENST00000555046 MMP10P09238 476 aa13.63□□□□□ -0.23
TMEM260-206ENST00000555046 TWISTNBQ3B726 338 aaPredicted RBP13.63□□□□□ -0.23
TMEM260-206ENST00000555046 C8orf58Q8NAV2 365 aa13.63□□□□□ -0.23
TMEM260-206ENST00000555046 TSR2Q969E8 191 aaKnown RBP13.63□□□□□ -0.23
TMEM260-206ENST00000555046 ABHD8Q96I13 439 aa13.63□□□□□ -0.23
TMEM260-206ENST00000555046 SETDB2Q96T68 719 aa13.63□□□□□ -0.23
TMEM260-206ENST00000555046 STK31Q9BXU1 1019 aa13.63□□□□□ -0.23
TMEM260-206ENST00000555046 PRDM10Q9NQV6 1147 aa13.63□□□□□ -0.23
TMEM260-206ENST00000555046 KIAA1551Q9HCM1 1747 aa13.63□□□□□ -0.23
TMEM260-206ENST00000555046 ZNF521Q96K83 1311 aa13.63□□□□□ -0.23
TMEM260-206ENST00000555046 C5P01031 1676 aa13.63□□□□□ -0.23
TMEM260-206ENST00000555046 SRP68Q9UHB9 627 aaKnown RBP13.62□□□□□ -0.23
TMEM260-206ENST00000555046 PXDNLA1KZ92 1463 aa13.61□□□□□ -0.23
TMEM260-206ENST00000555046 CAMTA2O94983 1202 aa13.61□□□□□ -0.23
TMEM260-206ENST00000555046 TM4SF1P30408 202 aa13.61□□□□□ -0.23
TMEM260-206ENST00000555046 RGS19P49795 217 aa13.61□□□□□ -0.23
TMEM260-206ENST00000555046 FKBP8Q14318 412 aa13.61□□□□□ -0.23
TMEM260-206ENST00000555046 PDIA6Q15084 440 aa13.61□□□□□ -0.23
TMEM260-206ENST00000555046 KRT24Q2M2I5 525 aa13.61□□□□□ -0.23
TMEM260-206ENST00000555046 NECTIN2Q92692 538 aa13.61□□□□□ -0.23
TMEM260-206ENST00000555046 ZNF428Q96B54 188 aa13.61□□□□□ -0.23
TMEM260-206ENST00000555046 FANCIQ9NVI1 1328 aa13.61□□□□□ -0.23
TMEM260-206ENST00000555046 NPHP1O15259 732 aa13.6□□□□□ -0.23
TMEM260-206ENST00000555046 DDX58O95786 925 aaKnown RBP13.6□□□□□ -0.23
TMEM260-206ENST00000555046 PIP4K2AP48426 406 aaPredicted RBP13.6□□□□□ -0.23
TMEM260-206ENST00000555046 HNRNPUQ00839 825 aaKnown RBP eCLIP13.6□□□□□ -0.23
TMEM260-206ENST00000555046 SLFN5Q08AF3 891 aa13.6□□□□□ -0.23
TMEM260-206ENST00000555046 HSP90AB3PQ58FF7 597 aa13.6□□□□□ -0.23
TMEM260-206ENST00000555046 COPS6Q7L5N1 327 aa13.6□□□□□ -0.23
TMEM260-206ENST00000555046 CHPF2Q9P2E5 772 aa13.6□□□□□ -0.23
TMEM260-206ENST00000555046 MAP3K15Q6ZN16 1313 aa13.6□□□□□ -0.23
TMEM260-206ENST00000555046 VAMP4O75379 141 aa13.59□□□□□ -0.23
TMEM260-206ENST00000555046 CT47B1P0C2W7 299 aaPredicted RBP13.59□□□□□ -0.23
TMEM260-206ENST00000555046 EXOSC9Q06265 439 aaKnown RBP13.59□□□□□ -0.23
TMEM260-206ENST00000555046 AIMP1Q12904 312 aaKnown RBP13.59□□□□□ -0.23
TMEM260-206ENST00000555046 NFIXQ14938 502 aa13.59□□□□□ -0.23
TMEM260-206ENST00000555046 TPTE2Q6XPS3 522 aa13.59□□□□□ -0.23
TMEM260-206ENST00000555046 ANKRD13DQ6ZTN6 518 aa13.59□□□□□ -0.23
TMEM260-206ENST00000555046 TSPYL6Q8N831 410 aa13.59□□□□□ -0.23
TMEM260-206ENST00000555046 DLG5Q8TDM6 1919 aa13.58□□□□□ -0.23
TMEM260-206ENST00000555046 SIPA1L3O60292 1781 aaPredicted RBP13.58□□□□□ -0.23
TMEM260-206ENST00000555046 GIGYF2Q6Y7W6 1299 aaKnown RBP13.58□□□□□ -0.24
TMEM260-206ENST00000555046 BICDL1Q6ZP65 573 aa13.58□□□□□ -0.24
TMEM260-206ENST00000555046 PLBD2Q8NHP8 589 aa13.58□□□□□ -0.24
TMEM260-206ENST00000555046 XAGE3Q8WTP9 111 aa13.58□□□□□ -0.24
TMEM260-206ENST00000555046 PDZRN3Q9UPQ7 1066 aa13.58□□□□□ -0.24
TMEM260-206ENST00000555046 KIF13BQ9NQT8 1826 aa13.57□□□□□ -0.24
TMEM260-206ENST00000555046 BRCA1P38398 1863 aaKnown RBP13.57□□□□□ -0.24
TMEM260-206ENST00000555046 POLRMTO00411 1230 aaKnown RBP13.57□□□□□ -0.24
TMEM260-206ENST00000555046 SLC4A2P04920 1241 aa13.57□□□□□ -0.24
TMEM260-206ENST00000555046 SERPINB2P05120 415 aa13.57□□□□□ -0.24
TMEM260-206ENST00000555046 TGFB2P61812 414 aa13.57□□□□□ -0.24
TMEM260-206ENST00000555046 TBC1D9BQ66K14 1250 aa13.57□□□□□ -0.24
TMEM260-206ENST00000555046 SMC1BQ8NDV3 1235 aa13.57□□□□□ -0.24
TMEM260-206ENST00000555046 BCL2L12Q9HB09 334 aa13.57□□□□□ -0.24
TMEM260-206ENST00000555046 SPINK5Q9NQ38 1064 aaPredicted RBP13.57□□□□□ -0.24
TMEM260-206ENST00000555046 NIP7Q9Y221 180 aaKnown RBP eCLIP13.57□□□□□ -0.24
TMEM260-206ENST00000555046 N4BP2Q86UW6 1770 aaPredicted RBP13.57□□□□□ -0.24
TMEM260-206ENST00000555046 UBR2Q8IWV8 1755 aa13.57□□□□□ -0.24
TMEM260-206ENST00000555046 TAF1LQ8IZX4 1826 aa13.56□□□□□ -0.24
TMEM260-206ENST00000555046 GTF2E1P29083 439 aaPredicted RBP13.56□□□□□ -0.24
TMEM260-206ENST00000555046 PROSER3Q2NL68 480 aa13.56□□□□□ -0.24
TMEM260-206ENST00000555046 PARP10Q53GL7 1025 aa13.56□□□□□ -0.24
TMEM260-206ENST00000555046 TTLL7Q6ZT98 887 aa13.56□□□□□ -0.24
TMEM260-206ENST00000555046 LRP10Q7Z4F1 713 aa13.56□□□□□ -0.24
TMEM260-206ENST00000555046 RIC3Q7Z5B4 369 aa13.56□□□□□ -0.24
TMEM260-206ENST00000555046 NBPF5PQ86XG9 351 aaPredicted RBP13.56□□□□□ -0.24
TMEM260-206ENST00000555046 NYXQ9GZU5 481 aa13.56□□□□□ -0.24
TMEM260-206ENST00000555046 ANXA1P04083 346 aa13.55□□□□□ -0.24
TMEM260-206ENST00000555046 ST5P78524 1137 aa13.55□□□□□ -0.24
TMEM260-206ENST00000555046 TCIRG1Q13488 830 aa13.55□□□□□ -0.24
TMEM260-206ENST00000555046 PPP1R42Q7Z4L9 355 aa13.55□□□□□ -0.24
TMEM260-206ENST00000555046 TRMT2AQ8IZ69 625 aaKnown RBP13.55□□□□□ -0.24
TMEM260-206ENST00000555046 ZBTB3Q9H5J0 574 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms