RNA–Protein interactions for RNA: ENST00000554821.1

CFAP54-207, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 3

Gene CFAP54, Length 474 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-207ENST00000554821 HIF1AQ16665 826 aa7.31□□□□□ -1.24
CFAP54-207ENST00000554821 C1orf53Q5VUE5 145 aa7.31□□□□□ -1.24
CFAP54-207ENST00000554821 L3MBTL2Q969R5 705 aa7.31□□□□□ -1.24
CFAP54-207ENST00000554821 ACDQ96AP0 544 aa7.31□□□□□ -1.24
CFAP54-207ENST00000554821 PPP1R12CQ9BZL4 782 aa7.31□□□□□ -1.24
CFAP54-207ENST00000554821 ZCCHC2Q9C0B9 1178 aaKnown RBP7.31□□□□□ -1.24
CFAP54-207ENST00000554821 ZNF232Q9UNY5 417 aa7.31□□□□□ -1.24
CFAP54-207ENST00000554821 FAM196BA6NMK8 535 aa7.3□□□□□ -1.24
CFAP54-207ENST00000554821 ARAFP10398 606 aa7.3□□□□□ -1.24
CFAP54-207ENST00000554821 SLCO4C1Q6ZQN7 724 aa7.3□□□□□ -1.24
CFAP54-207ENST00000554821 STAG2Q8N3U4 1231 aa7.3□□□□□ -1.24
CFAP54-207ENST00000554821 ABHD17AQ96GS6 310 aa7.3□□□□□ -1.24
CFAP54-207ENST00000554821 SEMA6BQ9H3T3 888 aa7.3□□□□□ -1.24
CFAP54-207ENST00000554821 NEUROD4Q9HD90 331 aa7.3□□□□□ -1.24
CFAP54-207ENST00000554821 EML1O00423 815 aa7.29□□□□□ -1.24
CFAP54-207ENST00000554821 BNIP3LO60238 219 aa7.29□□□□□ -1.24
CFAP54-207ENST00000554821 POTEAQ6S8J7 498 aa7.29□□□□□ -1.24
CFAP54-207ENST00000554821 TNS4Q8IZW8 715 aa7.29□□□□□ -1.24
CFAP54-207ENST00000554821 KLRG1Q96E93 195 aa7.29□□□□□ -1.24
CFAP54-207ENST00000554821 ZNF594Q96JF6 807 aaPredicted RBP7.29□□□□□ -1.24
CFAP54-207ENST00000554821 ZIC5Q96T25 663 aa7.29□□□□□ -1.24
CFAP54-207ENST00000554821 ANKIB1Q9P2G1 1089 aa7.29□□□□□ -1.24
CFAP54-207ENST00000554821 KIAA1024Q9UPX6 916 aa7.29□□□□□ -1.24
CFAP54-207ENST00000554821 USP3Q9Y6I4 520 aa7.29□□□□□ -1.24
CFAP54-207ENST00000554821 TNP2Q05952 138 aa7.28□□□□□ -1.24
CFAP54-207ENST00000554821 ZDHHC1Q8WTX9 485 aa7.28□□□□□ -1.24
CFAP54-207ENST00000554821 ZFP64Q9NPA5 681 aa7.28□□□□□ -1.24
CFAP54-207ENST00000554821 MAPTP10636 758 aaKnown RBP7.27□□□□□ -1.25
CFAP54-207ENST00000554821 COL8A1P27658 744 aa7.27□□□□□ -1.25
CFAP54-207ENST00000554821 ADH6P28332 368 aa7.27□□□□□ -1.25
CFAP54-207ENST00000554821 ARTNQ5T4W7 220 aa7.27□□□□□ -1.25
CFAP54-207ENST00000554821 RHPN1Q8TCX5 695 aa7.27□□□□□ -1.25
CFAP54-207ENST00000554821 VRTNQ9H8Y1 702 aa7.27□□□□□ -1.25
CFAP54-207ENST00000554821 KHNYNO15037 678 aaKnown RBP7.26□□□□□ -1.25
CFAP54-207ENST00000554821 PPP1R12BO60237 982 aaPredicted RBP7.26□□□□□ -1.25
CFAP54-207ENST00000554821 TSPAN10Q9H1Z9 355 aaPredicted RBP7.26□□□□□ -1.25
CFAP54-207ENST00000554821 MARK1Q9P0L2 795 aa7.26□□□□□ -1.25
CFAP54-207ENST00000554821 MKL2Q9ULH7 1088 aa7.26□□□□□ -1.25
CFAP54-207ENST00000554821 DCDC2BA2VCK2 349 aa7.25□□□□□ -1.25
CFAP54-207ENST00000554821 USP17L15C9J2P7 530 aa7.25□□□□□ -1.25
CFAP54-207ENST00000554821 USP17L10C9JJH3 530 aa7.25□□□□□ -1.25
CFAP54-207ENST00000554821 USP17L13C9JLJ4 530 aa7.25□□□□□ -1.25
CFAP54-207ENST00000554821 USP17L12C9JPN9 530 aa7.25□□□□□ -1.25
CFAP54-207ENST00000554821 USP17L11C9JVI0 530 aa7.25□□□□□ -1.25
CFAP54-207ENST00000554821 USP17L21D6R901 530 aa7.25□□□□□ -1.25
CFAP54-207ENST00000554821 USP17L18D6R9N7 530 aa7.25□□□□□ -1.25
CFAP54-207ENST00000554821 USP17L22D6RA61 530 aa7.25□□□□□ -1.25
CFAP54-207ENST00000554821 USP17L17D6RBQ6 530 aa7.25□□□□□ -1.25
CFAP54-207ENST00000554821 USP17L19D6RCP7 530 aa7.25□□□□□ -1.25
CFAP54-207ENST00000554821 USP17L20D6RJB6 530 aa7.25□□□□□ -1.25
CFAP54-207ENST00000554821 EFSO43281 561 aa7.25□□□□□ -1.25
CFAP54-207ENST00000554821 COBLO75128 1261 aa7.25□□□□□ -1.25
CFAP54-207ENST00000554821 DKK1O94907 266 aa7.25□□□□□ -1.25
CFAP54-207ENST00000554821 TXLNAP40222 546 aa7.25□□□□□ -1.25
CFAP54-207ENST00000554821 USP17L24Q0WX57 530 aa7.25□□□□□ -1.25
CFAP54-207ENST00000554821 PTK7Q13308 1070 aa7.25□□□□□ -1.25
CFAP54-207ENST00000554821 NEUROD1Q13562 356 aa7.25□□□□□ -1.25
CFAP54-207ENST00000554821 KANK4Q5T7N3 995 aaPredicted RBP7.25□□□□□ -1.25
CFAP54-207ENST00000554821 TSEN2Q8NCE0 465 aaKnown RBP7.25□□□□□ -1.25
CFAP54-207ENST00000554821 EDARADDQ8WWZ3 215 aa7.25□□□□□ -1.25
CFAP54-207ENST00000554821 PARP3Q9Y6F1 533 aa7.25□□□□□ -1.25
CFAP54-207ENST00000554821 LMOD1P29536 600 aaPredicted RBP7.24□□□□□ -1.25
CFAP54-207ENST00000554821 CTBSQ01459 385 aa7.24□□□□□ -1.25
CFAP54-207ENST00000554821 ZNF468Q5VIY5 522 aaPredicted RBP7.24□□□□□ -1.25
CFAP54-207ENST00000554821 NBPF11Q86T75 865 aa7.24□□□□□ -1.25
CFAP54-207ENST00000554821 ANKMY2Q8IV38 441 aa7.24□□□□□ -1.25
CFAP54-207ENST00000554821 GGA1Q9UJY5 639 aa7.24□□□□□ -1.25
CFAP54-207ENST00000554821 SFI1A8K8P3 1242 aa7.23□□□□□ -1.25
CFAP54-207ENST00000554821 C1QTNF9BB2RNN3 333 aa7.23□□□□□ -1.25
CFAP54-207ENST00000554821 EPXP11678 715 aa7.23□□□□□ -1.25
CFAP54-207ENST00000554821 IGFBP4P22692 258 aa7.23□□□□□ -1.25
CFAP54-207ENST00000554821 SNRPNP63162 240 aaKnown RBP7.23□□□□□ -1.25
CFAP54-207ENST00000554821 FOXD4L6Q3SYB3 417 aaPredicted RBP7.23□□□□□ -1.25
CFAP54-207ENST00000554821 FOXD4L3Q6VB84 417 aaPredicted RBP7.23□□□□□ -1.25
CFAP54-207ENST00000554821 PHACTR1Q9C0D0 580 aa7.23□□□□□ -1.25
CFAP54-207ENST00000554821 PRR12Q9ULL5 1215 aa7.23□□□□□ -1.25
CFAP54-207ENST00000554821 C2CD2LO14523 706 aa7.22□□□□□ -1.25
CFAP54-207ENST00000554821 CD33P20138 364 aa7.22□□□□□ -1.25
CFAP54-207ENST00000554821 AMPD1P23109 780 aa7.22□□□□□ -1.25
CFAP54-207ENST00000554821 DPYDQ12882 1025 aa7.22□□□□□ -1.25
CFAP54-207ENST00000554821 CRTC2Q53ET0 693 aaPredicted RBP7.22□□□□□ -1.25
CFAP54-207ENST00000554821 TBCELQ5QJ74 424 aa7.22□□□□□ -1.25
CFAP54-207ENST00000554821 LRRC69Q6ZNQ3 347 aa7.22□□□□□ -1.25
CFAP54-207ENST00000554821 C2orf49Q9BVC5 232 aaPredicted RBP7.22□□□□□ -1.25
CFAP54-207ENST00000554821 KRTAP17-1Q9BYP8 105 aa7.22□□□□□ -1.25
CFAP54-207ENST00000554821 EFCC1Q9HA90 598 aa7.22□□□□□ -1.25
CFAP54-207ENST00000554821 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.22□□□□□ -1.25
CFAP54-207ENST00000554821 ATAD2Q6PL18 1390 aa7.21□□□□□ -1.25
CFAP54-207ENST00000554821 KCNQ4P56696 695 aa7.21□□□□□ -1.26
CFAP54-207ENST00000554821 RTN1Q16799 776 aa7.21□□□□□ -1.26
CFAP54-207ENST00000554821 IER5Q5VY09 327 aa7.21□□□□□ -1.26
CFAP54-207ENST00000554821 SCG3Q8WXD2 468 aaKnown RBP7.21□□□□□ -1.26
CFAP54-207ENST00000554821 HINFPQ9BQA5 517 aa7.21□□□□□ -1.26
CFAP54-207ENST00000554821 NEURL1BA8MQ27 555 aa7.2□□□□□ -1.26
CFAP54-207ENST00000554821 FOXO3O43524 673 aa7.2□□□□□ -1.26
CFAP54-207ENST00000554821 CFAP70Q5T0N1 1121 aa7.2□□□□□ -1.26
CFAP54-207ENST00000554821 CD163Q86VB7 1156 aa7.2□□□□□ -1.26
CFAP54-207ENST00000554821 C7orf43Q8WVR3 580 aa7.2□□□□□ -1.26
CFAP54-207ENST00000554821 NOP53Q9NZM5 478 aaKnown RBP7.2□□□□□ -1.26
CFAP54-207ENST00000554821 ZNF777Q9ULD5 760 aaPredicted RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms