RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 PCDHGC4Q9Y5F7 938 aa7.67□□□□□ -1.18
SCFD1-214ENST00000554819 ATXN7O15265 892 aaPredicted RBP7.66□□□□□ -1.18
SCFD1-214ENST00000554819 THBS1P07996 1170 aa7.66□□□□□ -1.18
SCFD1-214ENST00000554819 SSFA2P28290 1259 aa7.66□□□□□ -1.18
SCFD1-214ENST00000554819 SAMD5Q5TGI4 173 aa7.66□□□□□ -1.18
SCFD1-214ENST00000554819 LRRC69Q6ZNQ3 347 aa7.66□□□□□ -1.18
SCFD1-214ENST00000554819 COL25A1Q9BXS0 654 aaPredicted RBP7.66□□□□□ -1.18
SCFD1-214ENST00000554819 SLAIN2Q9P270 581 aa7.66□□□□□ -1.18
SCFD1-214ENST00000554819 ATXN7L1Q9ULK2 861 aaPredicted RBP7.66□□□□□ -1.18
SCFD1-214ENST00000554819 GPR25O00155 361 aa7.65□□□□□ -1.18
SCFD1-214ENST00000554819 GMPRP36959 345 aa7.65□□□□□ -1.18
SCFD1-214ENST00000554819 UBAP2LQ14157 1087 aaKnown RBP7.65□□□□□ -1.18
SCFD1-214ENST00000554819 MYO19Q96H55 970 aa7.65□□□□□ -1.18
SCFD1-214ENST00000554819 SUSD3Q96L08 255 aa7.65□□□□□ -1.18
SCFD1-214ENST00000554819 C11orf91Q3C1V1 193 aa7.64□□□□□ -1.19
SCFD1-214ENST00000554819 MKNK1Q9BUB5 465 aa7.64□□□□□ -1.19
SCFD1-214ENST00000554819 QTRT2Q9H974 415 aaKnown RBP7.64□□□□□ -1.19
SCFD1-214ENST00000554819 NSFL1CQ9UNZ2 370 aaKnown RBP7.64□□□□□ -1.19
SCFD1-214ENST00000554819 MTMR7Q9Y216 660 aa7.64□□□□□ -1.19
SCFD1-214ENST00000554819 CARNS1A5YM72 827 aa7.63□□□□□ -1.19
SCFD1-214ENST00000554819 WIPF1O43516 503 aa7.63□□□□□ -1.19
SCFD1-214ENST00000554819 BNIP3LO60238 219 aa7.63□□□□□ -1.19
SCFD1-214ENST00000554819 FAM157BP0CG42 384 aa7.63□□□□□ -1.19
SCFD1-214ENST00000554819 LCE2CQ5TA81 110 aa7.63□□□□□ -1.19
SCFD1-214ENST00000554819 C16orf46Q6P387 395 aa7.63□□□□□ -1.19
SCFD1-214ENST00000554819 MBIPQ9NS73 344 aa7.63□□□□□ -1.19
SCFD1-214ENST00000554819 NDFIP2Q9NV92 336 aa7.63□□□□□ -1.19
SCFD1-214ENST00000554819 KHNYNO15037 678 aaKnown RBP7.62□□□□□ -1.19
SCFD1-214ENST00000554819 MX2P20592 715 aa7.62□□□□□ -1.19
SCFD1-214ENST00000554819 TNP2Q05952 138 aa7.62□□□□□ -1.19
SCFD1-214ENST00000554819 DGKZQ13574 1117 aa7.62□□□□□ -1.19
SCFD1-214ENST00000554819 LAMC2Q13753 1193 aa7.62□□□□□ -1.19
SCFD1-214ENST00000554819 COX20Q5RI15 118 aa7.62□□□□□ -1.19
SCFD1-214ENST00000554819 IER5Q5VY09 327 aa7.62□□□□□ -1.19
SCFD1-214ENST00000554819 ABHD17AQ96GS6 310 aa7.62□□□□□ -1.19
SCFD1-214ENST00000554819 HSH2DQ96JZ2 352 aa7.62□□□□□ -1.19
SCFD1-214ENST00000554819 CNTNAP3BQ96NU0 1288 aa7.62□□□□□ -1.19
SCFD1-214ENST00000554819 CNTNAP3Q9BZ76 1288 aa7.62□□□□□ -1.19
SCFD1-214ENST00000554819 TGFBR3LH3BV60 316 aa7.61□□□□□ -1.19
SCFD1-214ENST00000554819 MAPTP10636 758 aaKnown RBP7.61□□□□□ -1.19
SCFD1-214ENST00000554819 FGFR3P22607 806 aa7.61□□□□□ -1.19
SCFD1-214ENST00000554819 BRD2P25440 801 aaKnown RBP7.61□□□□□ -1.19
SCFD1-214ENST00000554819 NAA30Q147X3 362 aaPredicted RBP7.61□□□□□ -1.19
SCFD1-214ENST00000554819 ZNF280CQ8ND82 737 aa7.61□□□□□ -1.19
SCFD1-214ENST00000554819 CEP63Q96MT8 703 aa7.61□□□□□ -1.19
SCFD1-214ENST00000554819 DCDC2BA2VCK2 349 aa7.6□□□□□ -1.19
SCFD1-214ENST00000554819 SRSF11Q05519 484 aaKnown RBP7.6□□□□□ -1.19
SCFD1-214ENST00000554819 GAS6Q14393 721 aa7.6□□□□□ -1.19
SCFD1-214ENST00000554819 RNFT1Q5M7Z0 435 aa7.6□□□□□ -1.19
SCFD1-214ENST00000554819 BTLAQ7Z6A9 289 aa7.6□□□□□ -1.19
SCFD1-214ENST00000554819 KLK14Q9P0G3 267 aa7.6□□□□□ -1.19
SCFD1-214ENST00000554819 MARK1Q9P0L2 795 aa7.6□□□□□ -1.19
SCFD1-214ENST00000554819 LRFN2Q9ULH4 789 aa7.6□□□□□ -1.19
SCFD1-214ENST00000554819 EFSO43281 561 aa7.59□□□□□ -1.19
SCFD1-214ENST00000554819 MAP2K3P46734 347 aa7.59□□□□□ -1.19
SCFD1-214ENST00000554819 KRT76Q01546 638 aa7.59□□□□□ -1.19
SCFD1-214ENST00000554819 FAM182BQ5T319 152 aa7.59□□□□□ -1.19
SCFD1-214ENST00000554819 PHLDB3Q6NSJ2 640 aa7.59□□□□□ -1.19
SCFD1-214ENST00000554819 CAPN12Q6ZSI9 719 aa7.59□□□□□ -1.19
SCFD1-214ENST00000554819 KLRG1Q96E93 195 aa7.59□□□□□ -1.19
SCFD1-214ENST00000554819 IFT43Q96FT9 208 aa7.59□□□□□ -1.19
SCFD1-214ENST00000554819 BRD7Q9NPI1 651 aa7.59□□□□□ -1.19
SCFD1-214ENST00000554819 BCS1LQ9Y276 419 aa7.59□□□□□ -1.19
SCFD1-214ENST00000554819 BMP4P12644 408 aa7.58□□□□□ -1.2
SCFD1-214ENST00000554819 ARID4AP29374 1257 aaPredicted RBP7.58□□□□□ -1.2
SCFD1-214ENST00000554819 INSM1Q01101 510 aaPredicted RBP7.58□□□□□ -1.2
SCFD1-214ENST00000554819 SAP130Q9H0E3 1048 aa7.58□□□□□ -1.2
SCFD1-214ENST00000554819 MICAL2O94851 1124 aa7.57□□□□□ -1.2
SCFD1-214ENST00000554819 EPB42P16452 691 aa7.57□□□□□ -1.2
SCFD1-214ENST00000554819 KCNQ4P56696 695 aa7.57□□□□□ -1.2
SCFD1-214ENST00000554819 CTBSQ01459 385 aa7.57□□□□□ -1.2
SCFD1-214ENST00000554819 TYRO3Q06418 890 aa7.57□□□□□ -1.2
SCFD1-214ENST00000554819 STIM2Q9P246 746 aa7.57□□□□□ -1.2
SCFD1-214ENST00000554819 SEPT3Q9UH03 358 aa7.57□□□□□ -1.2
SCFD1-214ENST00000554819 DMGDHQ9UI17 866 aaKnown RBP7.57□□□□□ -1.2
SCFD1-214ENST00000554819 KCNH4Q9UQ05 1017 aa7.57□□□□□ -1.2
SCFD1-214ENST00000554819 IGF1RP08069 1367 aa7.57□□□□□ -1.2
SCFD1-214ENST00000554819 ADAMTS2O95450 1211 aa7.56□□□□□ -1.2
SCFD1-214ENST00000554819 BRD1O95696 1058 aa7.56□□□□□ -1.2
SCFD1-214ENST00000554819 SLURP2P0DP57 97 aa7.56□□□□□ -1.2
SCFD1-214ENST00000554819 CD33P20138 364 aa7.56□□□□□ -1.2
SCFD1-214ENST00000554819 IDH3AP50213 366 aa7.56□□□□□ -1.2
SCFD1-214ENST00000554819 ABTB2Q8N961 1025 aa7.56□□□□□ -1.2
SCFD1-214ENST00000554819 GTF3C2Q8WUA4 911 aaPredicted RBP7.56□□□□□ -1.2
SCFD1-214ENST00000554819 ARSDP51689 593 aa7.55□□□□□ -1.2
SCFD1-214ENST00000554819 SFSWAPQ12872 951 aaKnown RBP7.55□□□□□ -1.2
SCFD1-214ENST00000554819 TREML1Q86YW5 311 aa7.55□□□□□ -1.2
SCFD1-214ENST00000554819 HELQQ8TDG4 1101 aa7.55□□□□□ -1.2
SCFD1-214ENST00000554819 FAM13BQ9NYF5 915 aa7.55□□□□□ -1.2
SCFD1-214ENST00000554819 PRR12Q9ULL5 1215 aa7.55□□□□□ -1.2
SCFD1-214ENST00000554819 TNFRSF10BO14763 440 aa7.54□□□□□ -1.2
SCFD1-214ENST00000554819 INPP5BP32019 993 aa7.54□□□□□ -1.2
SCFD1-214ENST00000554819 SCNN1AP37088 669 aa7.54□□□□□ -1.2
SCFD1-214ENST00000554819 NEUROD1Q13562 356 aa7.54□□□□□ -1.2
SCFD1-214ENST00000554819 CCER1Q8TC90 406 aaPredicted RBP7.54□□□□□ -1.2
SCFD1-214ENST00000554819 TRAIPQ9BWF2 469 aa7.54□□□□□ -1.2
SCFD1-214ENST00000554819 EFCC1Q9HA90 598 aa7.54□□□□□ -1.2
SCFD1-214ENST00000554819 C11orf16Q9NQ32 467 aa7.54□□□□□ -1.2
SCFD1-214ENST00000554819 AVENQ9NQS1 362 aaPredicted RBP7.54□□□□□ -1.2
SCFD1-214ENST00000554819 STRN4Q9NRL3 753 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms