RNA–Protein interactions for RNA: ENST00000554808.1

LINC01397-201, Transcript of long intergenic non-protein coding RNA 1397, humanhuman

TSL 4 BASIC

Gene LINC01397, Length 579 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01397-201ENST00000554808 NBPF10Q6P3W6 841 aaKnown RBP10.29□□□□□ -0.76
LINC01397-201ENST00000554808 DZIP3Q86Y13 1208 aaKnown RBP10.29□□□□□ -0.76
LINC01397-201ENST00000554808 NBPF15Q8N660 670 aa10.29□□□□□ -0.76
LINC01397-201ENST00000554808 NECTIN2Q92692 538 aa10.29□□□□□ -0.76
LINC01397-201ENST00000554808 ARHGEF1Q92888 912 aaKnown RBP10.29□□□□□ -0.76
LINC01397-201ENST00000554808 ZNF330Q9Y3S2 320 aaPredicted RBP10.29□□□□□ -0.76
LINC01397-201ENST00000554808 CACNA1SQ13698 1873 aa10.29□□□□□ -0.76
LINC01397-201ENST00000554808 MAP3K15Q6ZN16 1313 aa10.29□□□□□ -0.76
LINC01397-201ENST00000554808 USP42Q9H9J4 1324 aaKnown RBP10.29□□□□□ -0.76
LINC01397-201ENST00000554808 DDX60Q8IY21 1712 aaKnown RBP10.28□□□□□ -0.76
LINC01397-201ENST00000554808 ATP10DQ9P241 1426 aa10.28□□□□□ -0.76
LINC01397-201ENST00000554808 PHF14O94880 888 aa10.28□□□□□ -0.76
LINC01397-201ENST00000554808 ZBTB7AO95365 584 aa10.28□□□□□ -0.76
LINC01397-201ENST00000554808 RARSP54136 660 aaKnown RBP10.28□□□□□ -0.76
LINC01397-201ENST00000554808 LRP10Q7Z4F1 713 aa10.28□□□□□ -0.76
LINC01397-201ENST00000554808 SMC4Q9NTJ3 1288 aa10.28□□□□□ -0.76
LINC01397-201ENST00000554808 ANKRD31Q8N7Z5 1873 aa10.27□□□□□ -0.76
LINC01397-201ENST00000554808 IPO8O15397 1037 aaKnown RBP10.27□□□□□ -0.77
LINC01397-201ENST00000554808 FLIIQ13045 1269 aa10.27□□□□□ -0.77
LINC01397-201ENST00000554808 GIGYF2Q6Y7W6 1299 aaKnown RBP10.27□□□□□ -0.77
LINC01397-201ENST00000554808 ANKRD13DQ6ZTN6 518 aa10.27□□□□□ -0.77
LINC01397-201ENST00000554808 COPS6Q7L5N1 327 aa10.27□□□□□ -0.77
LINC01397-201ENST00000554808 COL23A1Q86Y22 540 aaPredicted RBP10.27□□□□□ -0.77
LINC01397-201ENST00000554808 NLGN1Q8N2Q7 840 aa10.27□□□□□ -0.77
LINC01397-201ENST00000554808 PLBD2Q8NHP8 589 aa10.27□□□□□ -0.77
LINC01397-201ENST00000554808 ARHGAP45Q92619 1136 aa10.27□□□□□ -0.77
LINC01397-201ENST00000554808 MTFR1LQ9H019 292 aa10.27□□□□□ -0.77
LINC01397-201ENST00000554808 BRCA1P38398 1863 aaKnown RBP10.27□□□□□ -0.77
LINC01397-201ENST00000554808 IBTKQ9P2D0 1353 aaPredicted RBP10.26□□□□□ -0.77
LINC01397-201ENST00000554808 MSH5O43196 834 aa10.26□□□□□ -0.77
LINC01397-201ENST00000554808 CAMTA2O94983 1202 aa10.26□□□□□ -0.77
LINC01397-201ENST00000554808 MS4A1P11836 297 aa10.26□□□□□ -0.77
LINC01397-201ENST00000554808 NEXNQ0ZGT2 675 aa10.26□□□□□ -0.77
LINC01397-201ENST00000554808 FKBP5Q13451 457 aaPredicted RBP10.26□□□□□ -0.77
LINC01397-201ENST00000554808 PROSER3Q2NL68 480 aa10.26□□□□□ -0.77
LINC01397-201ENST00000554808 RIC3Q7Z5B4 369 aa10.26□□□□□ -0.77
LINC01397-201ENST00000554808 MRPL50Q8N5N7 158 aaKnown RBP10.26□□□□□ -0.77
LINC01397-201ENST00000554808 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.26□□□□□ -0.77
LINC01397-201ENST00000554808 XAGE3Q8WTP9 111 aa10.26□□□□□ -0.77
LINC01397-201ENST00000554808 SSH1Q8WYL5 1049 aa10.26□□□□□ -0.77
LINC01397-201ENST00000554808 ARXQ96QS3 562 aa10.26□□□□□ -0.77
LINC01397-201ENST00000554808 RCAN3Q9UKA8 241 aa10.26□□□□□ -0.77
LINC01397-201ENST00000554808 RNF123Q5XPI4 1314 aa10.26□□□□□ -0.77
LINC01397-201ENST00000554808 CARMIL3Q8ND23 1372 aa10.26□□□□□ -0.77
LINC01397-201ENST00000554808 ANXA1P04083 346 aa10.25□□□□□ -0.77
LINC01397-201ENST00000554808 PIP4K2AP48426 406 aaPredicted RBP10.25□□□□□ -0.77
LINC01397-201ENST00000554808 AIMP1Q12904 312 aaKnown RBP10.25□□□□□ -0.77
LINC01397-201ENST00000554808 KSR2Q6VAB6 950 aa10.25□□□□□ -0.77
LINC01397-201ENST00000554808 SGIP1Q9BQI5 828 aa10.25□□□□□ -0.77
LINC01397-201ENST00000554808 API5Q9BZZ5 524 aaKnown RBP10.25□□□□□ -0.77
LINC01397-201ENST00000554808 PHAXQ9H814 394 aaKnown RBP10.25□□□□□ -0.77
LINC01397-201ENST00000554808 TBC1D2BQ9UPU7 963 aa10.25□□□□□ -0.77
LINC01397-201ENST00000554808 CEP350Q5VT06 3117 aa10.25□□□□□ -0.77
LINC01397-201ENST00000554808 ARFGEF1Q9Y6D6 1849 aa10.24□□□□□ -0.77
LINC01397-201ENST00000554808 GYS1P13807 737 aa10.24□□□□□ -0.77
LINC01397-201ENST00000554808 POLD1P28340 1107 aa10.24□□□□□ -0.77
LINC01397-201ENST00000554808 PARP10Q53GL7 1025 aa10.24□□□□□ -0.77
LINC01397-201ENST00000554808 USPL1Q5W0Q7 1092 aa10.24□□□□□ -0.77
LINC01397-201ENST00000554808 TTLL7Q6ZT98 887 aa10.24□□□□□ -0.77
LINC01397-201ENST00000554808 AMIGO3Q86WK7 504 aa10.24□□□□□ -0.77
LINC01397-201ENST00000554808 ZNF784Q8NCA9 323 aaPredicted RBP10.24□□□□□ -0.77
LINC01397-201ENST00000554808 DNAAF4Q8WXU2 420 aa10.24□□□□□ -0.77
LINC01397-201ENST00000554808 FHDC1Q9C0D6 1143 aaPredicted RBP10.24□□□□□ -0.77
LINC01397-201ENST00000554808 ATF5Q9Y2D1 282 aaPredicted RBP10.24□□□□□ -0.77
LINC01397-201ENST00000554808 PI4KAP2A4QPH2 592 aa10.23□□□□□ -0.77
LINC01397-201ENST00000554808 HSP90B1P14625 803 aaKnown RBP10.23□□□□□ -0.77
LINC01397-201ENST00000554808 TRIM28Q13263 835 aaKnown RBP10.23□□□□□ -0.77
LINC01397-201ENST00000554808 TCIRG1Q13488 830 aa10.23□□□□□ -0.77
LINC01397-201ENST00000554808 ZKSCAN2Q63HK3 967 aa10.23□□□□□ -0.77
LINC01397-201ENST00000554808 PPP1R42Q7Z4L9 355 aa10.23□□□□□ -0.77
LINC01397-201ENST00000554808 PI4KAP1Q8N8J0 262 aa10.23□□□□□ -0.77
LINC01397-201ENST00000554808 SETDB2Q96T68 719 aa10.23□□□□□ -0.77
LINC01397-201ENST00000554808 METTL22Q9BUU2 404 aaPredicted RBP10.23□□□□□ -0.77
LINC01397-201ENST00000554808 NYXQ9GZU5 481 aa10.23□□□□□ -0.77
LINC01397-201ENST00000554808 ZBTB3Q9H5J0 574 aa10.23□□□□□ -0.77
LINC01397-201ENST00000554808 SPEF2Q9C093 1822 aa10.23□□□□□ -0.77
LINC01397-201ENST00000554808 ADCY9O60503 1353 aa10.23□□□□□ -0.77
LINC01397-201ENST00000554808 RIC1Q4ADV7 1423 aa10.23□□□□□ -0.77
LINC01397-201ENST00000554808 KIAA1551Q9HCM1 1747 aa10.22□□□□□ -0.77
LINC01397-201ENST00000554808 DCAF8L1A6NGE4 600 aa10.22□□□□□ -0.77
LINC01397-201ENST00000554808 CENPBP07199 599 aaPredicted RBP10.22□□□□□ -0.77
LINC01397-201ENST00000554808 BCL2L13Q9BXK5 485 aa10.22□□□□□ -0.77
LINC01397-201ENST00000554808 SRP68Q9UHB9 627 aaKnown RBP10.22□□□□□ -0.77
LINC01397-201ENST00000554808 MAP3K2Q9Y2U5 619 aa10.22□□□□□ -0.77
LINC01397-201ENST00000554808 PARP3Q9Y6F1 533 aa10.22□□□□□ -0.77
LINC01397-201ENST00000554808 TCERG1O14776 1098 aaKnown RBP10.21□□□□□ -0.77
LINC01397-201ENST00000554808 ALDH1L1O75891 902 aa10.21□□□□□ -0.77
LINC01397-201ENST00000554808 CCT4P50991 539 aaKnown RBP10.21□□□□□ -0.77
LINC01397-201ENST00000554808 ATF7IPQ6VMQ6 1270 aa10.21□□□□□ -0.77
LINC01397-201ENST00000554808 G2E3Q7L622 706 aa10.21□□□□□ -0.77
LINC01397-201ENST00000554808 ZNF34Q8IZ26 560 aa10.21□□□□□ -0.77
LINC01397-201ENST00000554808 CCDC191Q8NCU4 936 aa10.21□□□□□ -0.77
LINC01397-201ENST00000554808 LINS1Q8NG48 757 aa10.21□□□□□ -0.77
LINC01397-201ENST00000554808 SYT17Q9BSW7 474 aa10.21□□□□□ -0.77
LINC01397-201ENST00000554808 BCL2L12Q9HB09 334 aa10.21□□□□□ -0.77
LINC01397-201ENST00000554808 NOB1Q9ULX3 412 aaKnown RBP10.21□□□□□ -0.77
LINC01397-201ENST00000554808 NIP7Q9Y221 180 aaKnown RBP eCLIP10.21□□□□□ -0.77
LINC01397-201ENST00000554808 COL11A2P13942 1736 aaPredicted RBP10.21□□□□□ -0.78
LINC01397-201ENST00000554808 NPHP1O15259 732 aa10.2□□□□□ -0.78
LINC01397-201ENST00000554808 ABCC4O15439 1325 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms