RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 GNASQ5JWF2 1037 aa9.01□□□□□ -0.97
CHD8-207ENST00000554384 FAM181BA6NEQ2 426 aa9□□□□□ -0.97
CHD8-207ENST00000554384 GPC1P35052 558 aa9□□□□□ -0.97
CHD8-207ENST00000554384 ARHGAP4P98171 946 aa9□□□□□ -0.97
CHD8-207ENST00000554384 CHMP3Q9Y3E7 222 aa9□□□□□ -0.97
CHD8-207ENST00000554384 TTLL8A6PVC2 850 aa8.99□□□□□ -0.97
CHD8-207ENST00000554384 GTF2E1P29083 439 aaPredicted RBP8.99□□□□□ -0.97
CHD8-207ENST00000554384 DGKZQ13574 1117 aa8.99□□□□□ -0.97
CHD8-207ENST00000554384 NBPF10Q6P3W6 841 aaKnown RBP8.99□□□□□ -0.97
CHD8-207ENST00000554384 MAN1A2O60476 641 aa8.98□□□□□ -0.97
CHD8-207ENST00000554384 VSIG8P0DPA2 414 aa8.98□□□□□ -0.97
CHD8-207ENST00000554384 HIRAP54198 1017 aaPredicted RBP8.98□□□□□ -0.97
CHD8-207ENST00000554384 MARSP56192 900 aaKnown RBP8.98□□□□□ -0.97
CHD8-207ENST00000554384 SF3B2Q13435 895 aaKnown RBP8.98□□□□□ -0.97
CHD8-207ENST00000554384 LYSMD3Q7Z3D4 306 aa8.98□□□□□ -0.97
CHD8-207ENST00000554384 C7orf43Q8WVR3 580 aa8.98□□□□□ -0.97
CHD8-207ENST00000554384 ZNF428Q96B54 188 aa8.98□□□□□ -0.97
CHD8-207ENST00000554384 SOS2Q07890 1332 aaPredicted RBP8.98□□□□□ -0.97
CHD8-207ENST00000554384 SPATA31C2B4DYI2 1134 aa8.97□□□□□ -0.97
CHD8-207ENST00000554384 DNAJC14Q6Y2X3 702 aaPredicted RBP8.97□□□□□ -0.97
CHD8-207ENST00000554384 ATCAYQ86WG3 371 aa8.97□□□□□ -0.97
CHD8-207ENST00000554384 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.97□□□□□ -0.97
CHD8-207ENST00000554384 STIM2Q9P246 746 aa8.97□□□□□ -0.97
CHD8-207ENST00000554384 PPFIA3O75145 1194 aa8.96□□□□□ -0.98
CHD8-207ENST00000554384 ETFBKMTQ8IXQ9 262 aa8.96□□□□□ -0.98
CHD8-207ENST00000554384 MYO19Q96H55 970 aa8.96□□□□□ -0.98
CHD8-207ENST00000554384 DNMT3LQ9UJW3 386 aa8.96□□□□□ -0.98
CHD8-207ENST00000554384 BCS1LQ9Y276 419 aa8.96□□□□□ -0.98
CHD8-207ENST00000554384 NPR3P17342 541 aa8.95□□□□□ -0.98
CHD8-207ENST00000554384 EIF1AXP47813 144 aaKnown RBP8.95□□□□□ -0.98
CHD8-207ENST00000554384 SUZ12Q15022 739 aaKnown RBP8.95□□□□□ -0.98
CHD8-207ENST00000554384 RTN1Q16799 776 aa8.95□□□□□ -0.98
CHD8-207ENST00000554384 ZNF280CQ8ND82 737 aa8.95□□□□□ -0.98
CHD8-207ENST00000554384 IFT43Q96FT9 208 aa8.95□□□□□ -0.98
CHD8-207ENST00000554384 CCDC87Q9NVE4 849 aa8.95□□□□□ -0.98
CHD8-207ENST00000554384 FAM13AO94988 1023 aa8.94□□□□□ -0.98
CHD8-207ENST00000554384 C11orf91Q3C1V1 193 aa8.94□□□□□ -0.98
CHD8-207ENST00000554384 TIMMDC1Q9NPL8 285 aa8.94□□□□□ -0.98
CHD8-207ENST00000554384 ATP4AP20648 1035 aa8.93□□□□□ -0.98
CHD8-207ENST00000554384 MSX1P28360 303 aa8.93□□□□□ -0.98
CHD8-207ENST00000554384 MAPK1P28482 360 aa8.93□□□□□ -0.98
CHD8-207ENST00000554384 AAMPQ13685 434 aa8.93□□□□□ -0.98
CHD8-207ENST00000554384 C1orf53Q5VUE5 145 aa8.93□□□□□ -0.98
CHD8-207ENST00000554384 RHPN1Q8TCX5 695 aa8.93□□□□□ -0.98
CHD8-207ENST00000554384 HSH2DQ96JZ2 352 aa8.93□□□□□ -0.98
CHD8-207ENST00000554384 GPAMQ9HCL2 828 aa8.93□□□□□ -0.98
CHD8-207ENST00000554384 FZD6O60353 706 aa8.92□□□□□ -0.98
CHD8-207ENST00000554384 ANKRD33BA6NCL7 494 aa8.91□□□□□ -0.98
CHD8-207ENST00000554384 BRD2P25440 801 aaKnown RBP8.91□□□□□ -0.98
CHD8-207ENST00000554384 NBPF1Q3BBV0 1214 aa8.91□□□□□ -0.98
CHD8-207ENST00000554384 BICDL1Q6ZP65 573 aa8.91□□□□□ -0.98
CHD8-207ENST00000554384 SUSD3Q96L08 255 aa8.91□□□□□ -0.98
CHD8-207ENST00000554384 ZIC5Q96T25 663 aa8.91□□□□□ -0.98
CHD8-207ENST00000554384 ARSJQ5FYB0 599 aaPredicted RBP8.9□□□□□ -0.98
CHD8-207ENST00000554384 LRRC69Q6ZNQ3 347 aa8.9□□□□□ -0.98
CHD8-207ENST00000554384 NPM2Q86SE8 214 aaKnown RBP8.9□□□□□ -0.98
CHD8-207ENST00000554384 TREML1Q86YW5 311 aa8.9□□□□□ -0.98
CHD8-207ENST00000554384 RUBCNLQ9H714 662 aa8.9□□□□□ -0.98
CHD8-207ENST00000554384 ZDHHC3Q9NYG2 299 aa8.9□□□□□ -0.98
CHD8-207ENST00000554384 DCTN4Q9UJW0 460 aa8.9□□□□□ -0.98
CHD8-207ENST00000554384 USP20Q9Y2K6 914 aa8.9□□□□□ -0.98
CHD8-207ENST00000554384 SENP3-EIF4A1A0A087X0R7 540 aa8.89□□□□□ -0.99
CHD8-207ENST00000554384 TATP17735 454 aaPredicted RBP8.89□□□□□ -0.99
CHD8-207ENST00000554384 DNM1Q05193 864 aaKnown RBP8.89□□□□□ -0.99
CHD8-207ENST00000554384 GPR161Q8N6U8 529 aaKnown RBP8.89□□□□□ -0.99
CHD8-207ENST00000554384 GAS2L1Q99501 681 aaPredicted RBP8.89□□□□□ -0.99
CHD8-207ENST00000554384 MICAL2O94851 1124 aa8.88□□□□□ -0.99
CHD8-207ENST00000554384 ZAP70P43403 619 aa8.88□□□□□ -0.99
CHD8-207ENST00000554384 WDR44Q5JSH3 913 aa8.88□□□□□ -0.99
CHD8-207ENST00000554384 GPR152Q8TDT2 470 aa8.88□□□□□ -0.99
CHD8-207ENST00000554384 EDEM1Q92611 657 aa8.88□□□□□ -0.99
CHD8-207ENST00000554384 BRPF3Q9ULD4 1205 aa8.88□□□□□ -0.99
CHD8-207ENST00000554384 POLIQ9UNA4 740 aa8.88□□□□□ -0.99
CHD8-207ENST00000554384 A0A1B0GTH6 734 aa8.87□□□□□ -0.99
CHD8-207ENST00000554384 A0A1W2PNR3 127 aa8.87□□□□□ -0.99
CHD8-207ENST00000554384 OPLAHO14841 1288 aa8.87□□□□□ -0.99
CHD8-207ENST00000554384 KRT76Q01546 638 aa8.87□□□□□ -0.99
CHD8-207ENST00000554384 TAGLNQ01995 201 aaKnown RBP8.87□□□□□ -0.99
CHD8-207ENST00000554384 TMC7Q7Z402 723 aa8.87□□□□□ -0.99
CHD8-207ENST00000554384 NPAS4Q8IUM7 802 aa8.87□□□□□ -0.99
CHD8-207ENST00000554384 DMGDHQ9UI17 866 aaKnown RBP8.87□□□□□ -0.99
CHD8-207ENST00000554384 RBM25P49756 843 aaKnown RBP8.86□□□□□ -0.99
CHD8-207ENST00000554384 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.86□□□□□ -0.99
CHD8-207ENST00000554384 ABTB2Q8N961 1025 aa8.86□□□□□ -0.99
CHD8-207ENST00000554384 TMC1Q8TDI8 760 aa8.86□□□□□ -0.99
CHD8-207ENST00000554384 A6NHS1 94 aa8.85□□□□□ -0.99
CHD8-207ENST00000554384 PTSQ03393 145 aa8.85□□□□□ -0.99
CHD8-207ENST00000554384 ALKBH2Q6NS38 261 aa8.85□□□□□ -0.99
CHD8-207ENST00000554384 ASB16Q96NS5 453 aa8.85□□□□□ -0.99
CHD8-207ENST00000554384 TGFBR3LH3BV60 316 aa8.84□□□□□ -0.99
CHD8-207ENST00000554384 NDUFB5O43674 189 aa8.84□□□□□ -0.99
CHD8-207ENST00000554384 F11P03951 625 aa8.84□□□□□ -0.99
CHD8-207ENST00000554384 PDGFAP04085 211 aa8.84□□□□□ -0.99
CHD8-207ENST00000554384 THBS1P07996 1170 aa8.84□□□□□ -0.99
CHD8-207ENST00000554384 IDH3AP50213 366 aa8.84□□□□□ -0.99
CHD8-207ENST00000554384 GGNBP2Q9H3C7 697 aa8.84□□□□□ -0.99
CHD8-207ENST00000554384 NEUROD4Q9HD90 331 aa8.84□□□□□ -0.99
CHD8-207ENST00000554384 DYRK1BQ9Y463 629 aa8.84□□□□□ -0.99
CHD8-207ENST00000554384 GRNP28799 593 aaKnown RBP8.83□□□□□ -1
CHD8-207ENST00000554384 GSK3AP49840 483 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms