RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 ATCAYQ86WG3 371 aa8.87□□□□□ -0.99
SYNE2-210ENST00000553455 CRIPAKQ8N1N5 446 aa8.87□□□□□ -0.99
SYNE2-210ENST00000553455 IFT43Q96FT9 208 aa8.87□□□□□ -0.99
SYNE2-210ENST00000553455 NRG2O14511 850 aaPredicted RBP8.86□□□□□ -0.99
SYNE2-210ENST00000553455 IGHA2P01877 340 aa8.86□□□□□ -0.99
SYNE2-210ENST00000553455 RHOQP17081 205 aa8.86□□□□□ -0.99
SYNE2-210ENST00000553455 SCARF1Q14162 830 aa8.86□□□□□ -0.99
SYNE2-210ENST00000553455 TMC7Q7Z402 723 aa8.86□□□□□ -0.99
SYNE2-210ENST00000553455 RHPN1Q8TCX5 695 aa8.86□□□□□ -0.99
SYNE2-210ENST00000553455 AIDAQ96BJ3 306 aa8.86□□□□□ -0.99
SYNE2-210ENST00000553455 NDUFB5O43674 189 aa8.85□□□□□ -0.99
SYNE2-210ENST00000553455 PKDCCQ504Y2 493 aa8.85□□□□□ -0.99
SYNE2-210ENST00000553455 ZSCAN29Q8IWY8 852 aaPredicted RBP8.85□□□□□ -0.99
SYNE2-210ENST00000553455 ZFP42Q96MM3 310 aa8.85□□□□□ -0.99
SYNE2-210ENST00000553455 BRPF3Q9ULD4 1205 aa8.85□□□□□ -0.99
SYNE2-210ENST00000553455 UNCXA6NJT0 531 aa8.84□□□□□ -0.99
SYNE2-210ENST00000553455 GFRA3O60609 400 aa8.84□□□□□ -0.99
SYNE2-210ENST00000553455 ZAP70P43403 619 aa8.84□□□□□ -0.99
SYNE2-210ENST00000553455 FBXO33Q7Z6M2 555 aa8.84□□□□□ -0.99
SYNE2-210ENST00000553455 TREML1Q86YW5 311 aa8.84□□□□□ -0.99
SYNE2-210ENST00000553455 ZNF280CQ8ND82 737 aa8.84□□□□□ -0.99
SYNE2-210ENST00000553455 DNMT3LQ9UJW3 386 aa8.84□□□□□ -0.99
SYNE2-210ENST00000553455 GPC6Q9Y625 555 aaPredicted RBP8.84□□□□□ -0.99
SYNE2-210ENST00000553455 FIGNL2A6NMB9 653 aa8.83□□□□□ -1
SYNE2-210ENST00000553455 TGFBR3LH3BV60 316 aa8.83□□□□□ -1
SYNE2-210ENST00000553455 AXIN1O15169 862 aa8.83□□□□□ -1
SYNE2-210ENST00000553455 TATP17735 454 aaPredicted RBP8.83□□□□□ -1
SYNE2-210ENST00000553455 RANGAP1P46060 587 aaPredicted RBP8.83□□□□□ -1
SYNE2-210ENST00000553455 HSH2DQ96JZ2 352 aa8.83□□□□□ -1
SYNE2-210ENST00000553455 SUSD3Q96L08 255 aa8.83□□□□□ -1
SYNE2-210ENST00000553455 CITED4Q96RK1 184 aa8.83□□□□□ -1
SYNE2-210ENST00000553455 FAM129BQ96TA1 746 aa8.83□□□□□ -1
SYNE2-210ENST00000553455 BCL2L13Q9BXK5 485 aa8.83□□□□□ -1
SYNE2-210ENST00000553455 DMGDHQ9UI17 866 aaKnown RBP8.83□□□□□ -1
SYNE2-210ENST00000553455 A0A1B0GTH6 734 aa8.82□□□□□ -1
SYNE2-210ENST00000553455 ZNF16P17020 682 aaPredicted RBP8.82□□□□□ -1
SYNE2-210ENST00000553455 MSX1P28360 303 aa8.82□□□□□ -1
SYNE2-210ENST00000553455 AAMPQ13685 434 aa8.82□□□□□ -1
SYNE2-210ENST00000553455 GJD3Q8N144 294 aa8.82□□□□□ -1
SYNE2-210ENST00000553455 EDEM1Q92611 657 aa8.82□□□□□ -1
SYNE2-210ENST00000553455 ZIC5Q96T25 663 aa8.82□□□□□ -1
SYNE2-210ENST00000553455 TIMMDC1Q9NPL8 285 aa8.82□□□□□ -1
SYNE2-210ENST00000553455 POLIQ9UNA4 740 aa8.82□□□□□ -1
SYNE2-210ENST00000553455 GPR182O15218 404 aa8.81□□□□□ -1
SYNE2-210ENST00000553455 ST8SIA5O15466 376 aa8.81□□□□□ -1
SYNE2-210ENST00000553455 TREHO43280 583 aa8.81□□□□□ -1
SYNE2-210ENST00000553455 PDGFAP04085 211 aa8.81□□□□□ -1
SYNE2-210ENST00000553455 MZF1P28698 734 aaPredicted RBP8.81□□□□□ -1
SYNE2-210ENST00000553455 COL19A1Q14993 1142 aa8.81□□□□□ -1
SYNE2-210ENST00000553455 IER5Q5VY09 327 aa8.81□□□□□ -1
SYNE2-210ENST00000553455 GIPC2Q8TF65 315 aa8.81□□□□□ -1
SYNE2-210ENST00000553455 MICAL2O94851 1124 aa8.8□□□□□ -1
SYNE2-210ENST00000553455 P4HBP07237 508 aaKnown RBP8.8□□□□□ -1
SYNE2-210ENST00000553455 TAGLNQ01995 201 aaKnown RBP8.8□□□□□ -1
SYNE2-210ENST00000553455 DNM1Q05193 864 aaKnown RBP8.8□□□□□ -1
SYNE2-210ENST00000553455 FMR1Q06787 632 aaKnown RBP eCLIP8.8□□□□□ -1
SYNE2-210ENST00000553455 DSC3Q14574 896 aa8.8□□□□□ -1
SYNE2-210ENST00000553455 HIF1AQ16665 826 aa8.8□□□□□ -1
SYNE2-210ENST00000553455 AAASQ9NRG9 546 aa8.8□□□□□ -1
SYNE2-210ENST00000553455 OPLAHO14841 1288 aa8.79□□□□□ -1
SYNE2-210ENST00000553455 BICDL1Q6ZP65 573 aa8.79□□□□□ -1
SYNE2-210ENST00000553455 ATP13A2Q9NQ11 1180 aa8.79□□□□□ -1
SYNE2-210ENST00000553455 SENP3-EIF4A1A0A087X0R7 540 aa8.78□□□□□ -1
SYNE2-210ENST00000553455 GPR152Q8TDT2 470 aa8.78□□□□□ -1
SYNE2-210ENST00000553455 DMRTB1Q96MA1 342 aa8.78□□□□□ -1
SYNE2-210ENST00000553455 CRISPLD1Q9H336 500 aa8.78□□□□□ -1
SYNE2-210ENST00000553455 DACH1Q9UI36 760 aa8.78□□□□□ -1
SYNE2-210ENST00000553455 DYRK1BQ9Y463 629 aa8.78□□□□□ -1
SYNE2-210ENST00000553455 A0A1W2PNR3 127 aa8.77□□□□□ -1.01
SYNE2-210ENST00000553455 IDH3AP50213 366 aa8.77□□□□□ -1.01
SYNE2-210ENST00000553455 PDE3BQ13370 1112 aa8.77□□□□□ -1.01
SYNE2-210ENST00000553455 ARSJQ5FYB0 599 aaPredicted RBP8.77□□□□□ -1.01
SYNE2-210ENST00000553455 LRRC69Q6ZNQ3 347 aa8.77□□□□□ -1.01
SYNE2-210ENST00000553455 BTLAQ7Z6A9 289 aa8.77□□□□□ -1.01
SYNE2-210ENST00000553455 ALKBH8Q96BT7 664 aaKnown RBP8.77□□□□□ -1.01
SYNE2-210ENST00000553455 NUDT16Q96DE0 195 aaKnown RBP8.77□□□□□ -1.01
SYNE2-210ENST00000553455 GPAMQ9HCL2 828 aa8.77□□□□□ -1.01
SYNE2-210ENST00000553455 GRNP28799 593 aaKnown RBP8.76□□□□□ -1.01
SYNE2-210ENST00000553455 INPP5BP32019 993 aa8.76□□□□□ -1.01
SYNE2-210ENST00000553455 USP5P45974 858 aa8.76□□□□□ -1.01
SYNE2-210ENST00000553455 LAPTM4AQ15012 233 aa8.76□□□□□ -1.01
SYNE2-210ENST00000553455 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.76□□□□□ -1.01
SYNE2-210ENST00000553455 TMC1Q8TDI8 760 aa8.76□□□□□ -1.01
SYNE2-210ENST00000553455 RUBCNLQ9H714 662 aa8.76□□□□□ -1.01
SYNE2-210ENST00000553455 KIAA1522Q9P206 1035 aaPredicted RBP8.76□□□□□ -1.01
SYNE2-210ENST00000553455 ANKIB1Q9P2G1 1089 aa8.76□□□□□ -1.01
SYNE2-210ENST00000553455 SOBPA7XYQ1 873 aa8.75□□□□□ -1.01
SYNE2-210ENST00000553455 E9PSI1 815 aa8.75□□□□□ -1.01
SYNE2-210ENST00000553455 F11P03951 625 aa8.75□□□□□ -1.01
SYNE2-210ENST00000553455 TYRO3Q06418 890 aa8.75□□□□□ -1.01
SYNE2-210ENST00000553455 EHHADHQ08426 723 aa8.75□□□□□ -1.01
SYNE2-210ENST00000553455 EAPPQ56P03 285 aaPredicted RBP8.75□□□□□ -1.01
SYNE2-210ENST00000553455 GGNBP2Q9H3C7 697 aa8.75□□□□□ -1.01
SYNE2-210ENST00000553455 USP20Q9Y2K6 914 aa8.75□□□□□ -1.01
SYNE2-210ENST00000553455 A6NHS1 94 aa8.74□□□□□ -1.01
SYNE2-210ENST00000553455 MAN1A2O60476 641 aa8.74□□□□□ -1.01
SYNE2-210ENST00000553455 THBS1P07996 1170 aa8.74□□□□□ -1.01
SYNE2-210ENST00000553455 ARSDP51689 593 aa8.74□□□□□ -1.01
SYNE2-210ENST00000553455 FAM13BQ9NYF5 915 aa8.74□□□□□ -1.01
SYNE2-210ENST00000553455 PLCB3Q01970 1234 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms